RNA–Protein interactions for RNA: ENST00000617166.1

NCAM1-224, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 4

Gene NCAM1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-224ENST00000617166 SOX12O15370 315 aa15.38■□□□□ 0.05
NCAM1-224ENST00000617166 EFCAB3Q8N7B9 438 aa15.38■□□□□ 0.05
NCAM1-224ENST00000617166 SEC24BO95487 1268 aa15.37■□□□□ 0.05
NCAM1-224ENST00000617166 IRX5P78411 483 aaPredicted RBP15.37■□□□□ 0.05
NCAM1-224ENST00000617166 ARHGEF11O15085 1522 aa15.35■□□□□ 0.05
NCAM1-224ENST00000617166 PLCG2P16885 1265 aa15.34■□□□□ 0.05
NCAM1-224ENST00000617166 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
NCAM1-224ENST00000617166 OCEL1Q9H607 264 aa15.34■□□□□ 0.05
NCAM1-224ENST00000617166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.32■□□□□ 0.04
NCAM1-224ENST00000617166 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
NCAM1-224ENST00000617166 PRDM2Q13029 1718 aa15.3■□□□□ 0.04
NCAM1-224ENST00000617166 COLQQ9Y215 455 aaPredicted RBP15.3■□□□□ 0.04
NCAM1-224ENST00000617166 POTEFA5A3E0 1075 aa15.28■□□□□ 0.04
NCAM1-224ENST00000617166 NLRP6P59044 892 aa15.28■□□□□ 0.04
NCAM1-224ENST00000617166 PDCD7Q8N8D1 485 aaKnown RBP15.27■□□□□ 0.04
NCAM1-224ENST00000617166 TOP2AP11388 1531 aaKnown RBP15.27■□□□□ 0.03
NCAM1-224ENST00000617166 RYDENQ9NUL5 291 aaKnown RBP15.25■□□□□ 0.03
NCAM1-224ENST00000617166 MFRPQ9BY79 579 aa15.24■□□□□ 0.03
NCAM1-224ENST00000617166 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
NCAM1-224ENST00000617166 IFT140Q96RY7 1462 aa15.22■□□□□ 0.03
NCAM1-224ENST00000617166 BBXQ8WY36 941 aaPredicted RBP15.22■□□□□ 0.03
NCAM1-224ENST00000617166 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
NCAM1-224ENST00000617166 CHD1O14646 1710 aa15.22■□□□□ 0.03
NCAM1-224ENST00000617166 FBXO22Q8NEZ5 403 aa15.21■□□□□ 0.03
NCAM1-224ENST00000617166 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
NCAM1-224ENST00000617166 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
NCAM1-224ENST00000617166 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
NCAM1-224ENST00000617166 LHX8Q68G74 356 aa15.18■□□□□ 0.02
NCAM1-224ENST00000617166 L3MBTL3Q96JM7 780 aaPredicted RBP15.18■□□□□ 0.02
NCAM1-224ENST00000617166 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
NCAM1-224ENST00000617166 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
NCAM1-224ENST00000617166 MS4A4AQ96JQ5 239 aa15.16■□□□□ 0.02
NCAM1-224ENST00000617166 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
NCAM1-224ENST00000617166 MAMSTRQ6ZN01 415 aa15.14■□□□□ 0.01
NCAM1-224ENST00000617166 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.12■□□□□ 0.01
NCAM1-224ENST00000617166 TARBP1Q13395 1621 aaKnown RBP15.11■□□□□ 0.01
NCAM1-224ENST00000617166 G3V3G9 751 aa15.09■□□□□ 0.01
NCAM1-224ENST00000617166 DPY19L2Q6NUT2 758 aa15.09■□□□□ 0.01
NCAM1-224ENST00000617166 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
NCAM1-224ENST00000617166 BOLA1Q9Y3E2 137 aa15.08■□□□□ 0
NCAM1-224ENST00000617166 CCDC88BA6NC98 1476 aa15.08■□□□□ 0
NCAM1-224ENST00000617166 AQRO60306 1485 aaKnown RBP eCLIP15.08■□□□□ 0
NCAM1-224ENST00000617166 GTPBP6O43824 516 aaPredicted RBP15.07■□□□□ 0
NCAM1-224ENST00000617166 POTEJP0CG39 1038 aa15.06■□□□□ 0
NCAM1-224ENST00000617166 SCUBE2Q9NQ36 999 aa15.06■□□□□ 0
NCAM1-224ENST00000617166 TMEM121BQ9BXQ6 578 aaPredicted RBP15.05■□□□□ -0
NCAM1-224ENST00000617166 C3orf67Q6ZVT6 689 aa15.01□□□□□ -0.01
NCAM1-224ENST00000617166 MICALL2Q8IY33 904 aa15.01□□□□□ -0.01
NCAM1-224ENST00000617166 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
NCAM1-224ENST00000617166 CLASP1Q7Z460 1538 aa15□□□□□ -0.01
NCAM1-224ENST00000617166 SPRYD3Q8NCJ5 442 aa14.99□□□□□ -0.01
NCAM1-224ENST00000617166 POLA1P09884 1462 aaPredicted RBP14.98□□□□□ -0.01
NCAM1-224ENST00000617166 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.97□□□□□ -0.01
NCAM1-224ENST00000617166 PPP1R37O75864 691 aa14.96□□□□□ -0.01
NCAM1-224ENST00000617166 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
NCAM1-224ENST00000617166 RAD54L2Q9Y4B4 1467 aa14.95□□□□□ -0.02
NCAM1-224ENST00000617166 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
NCAM1-224ENST00000617166 PAXIP1Q6ZW49 1069 aaPredicted RBP14.9□□□□□ -0.02
NCAM1-224ENST00000617166 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
NCAM1-224ENST00000617166 SYNJ1O43426 1573 aa14.89□□□□□ -0.03
NCAM1-224ENST00000617166 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
NCAM1-224ENST00000617166 WDR97A6NE52 1622 aa14.85□□□□□ -0.03
NCAM1-224ENST00000617166 SOGA1O94964 1423 aa14.85□□□□□ -0.03
NCAM1-224ENST00000617166 SLAIN1Q8ND83 568 aa14.85□□□□□ -0.03
NCAM1-224ENST00000617166 FGD5Q6ZNL6 1462 aa14.84□□□□□ -0.03
NCAM1-224ENST00000617166 MAGI1Q96QZ7 1491 aaPredicted RBP14.83□□□□□ -0.03
NCAM1-224ENST00000617166 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
NCAM1-224ENST00000617166 GAPVD1Q14C86 1478 aa14.81□□□□□ -0.04
NCAM1-224ENST00000617166 SYNJ2O15056 1496 aa14.79□□□□□ -0.04
NCAM1-224ENST00000617166 CUX1P39880 1505 aa14.79□□□□□ -0.04
NCAM1-224ENST00000617166 PLCB2Q00722 1185 aa14.79□□□□□ -0.04
NCAM1-224ENST00000617166 ERCC6L2Q5T890 1561 aa14.78□□□□□ -0.04
NCAM1-224ENST00000617166 GRIN2BQ13224 1484 aa14.78□□□□□ -0.04
NCAM1-224ENST00000617166 CHMP7Q8WUX9 453 aaPredicted RBP14.77□□□□□ -0.05
NCAM1-224ENST00000617166 TMC2Q8TDI7 906 aa14.76□□□□□ -0.05
NCAM1-224ENST00000617166 TMEM92Q6UXU6 159 aa14.75□□□□□ -0.05
NCAM1-224ENST00000617166 KIF3CO14782 793 aa14.74□□□□□ -0.05
NCAM1-224ENST00000617166 SNPHO15079 494 aa14.72□□□□□ -0.05
NCAM1-224ENST00000617166 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
NCAM1-224ENST00000617166 CRISPLD2Q9H0B8 497 aa14.71□□□□□ -0.05
NCAM1-224ENST00000617166 GPHNQ9NQX3 736 aaPredicted RBP14.71□□□□□ -0.05
NCAM1-224ENST00000617166 C2orf72A6NCS6 295 aa14.7□□□□□ -0.06
NCAM1-224ENST00000617166 KIF13AQ9H1H9 1805 aa14.69□□□□□ -0.06
NCAM1-224ENST00000617166 PDE4AP27815 886 aa14.68□□□□□ -0.06
NCAM1-224ENST00000617166 CEP170Q5SW79 1584 aa14.66□□□□□ -0.06
NCAM1-224ENST00000617166 NCKAP5LQ9HCH0 1330 aa14.66□□□□□ -0.06
NCAM1-224ENST00000617166 CADPS2Q86UW7 1296 aa14.65□□□□□ -0.06
NCAM1-224ENST00000617166 FOXK1P85037 733 aa14.64□□□□□ -0.07
NCAM1-224ENST00000617166 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
NCAM1-224ENST00000617166 SHROOM2Q13796 1616 aa14.63□□□□□ -0.07
NCAM1-224ENST00000617166 ADAMTS12P58397 1594 aa14.63□□□□□ -0.07
NCAM1-224ENST00000617166 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
NCAM1-224ENST00000617166 DOK7Q18PE1 504 aa14.61□□□□□ -0.07
NCAM1-224ENST00000617166 MFSD10Q14728 455 aa14.6□□□□□ -0.07
NCAM1-224ENST00000617166 NUP160Q12769 1436 aa14.59□□□□□ -0.07
NCAM1-224ENST00000617166 DSG2Q14126 1118 aa14.58□□□□□ -0.08
NCAM1-224ENST00000617166 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
NCAM1-224ENST00000617166 TSHZ2Q9NRE2 1034 aa14.58□□□□□ -0.08
NCAM1-224ENST00000617166 HOXB3P14651 431 aaPredicted RBP14.57□□□□□ -0.08
NCAM1-224ENST00000617166 DDX27Q96GQ7 796 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms