RNA–Protein interactions for RNA: ENST00000617166.1

NCAM1-224, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 4

Gene NCAM1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-224ENST00000617166 AEBP2Q6ZN18 517 aaPredicted RBP31.76■■■□□ 2.67
NCAM1-224ENST00000617166 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.55
NCAM1-224ENST00000617166 PHF23Q9BUL5 403 aaPredicted RBP27.17■■□□□ 1.94
NCAM1-224ENST00000617166 SENP3Q9H4L4 574 aaPredicted RBP27.12■■□□□ 1.93
NCAM1-224ENST00000617166 PLPPR3Q6T4P5 718 aa25.17■■□□□ 1.62
NCAM1-224ENST00000617166 FOXD1Q16676 465 aa25.08■■□□□ 1.61
NCAM1-224ENST00000617166 PPP6R1Q9UPN7 881 aa23.98■■□□□ 1.43
NCAM1-224ENST00000617166 ADRA2BP18089 450 aa23.96■■□□□ 1.43
NCAM1-224ENST00000617166 PIAS4Q8N2W9 510 aaPredicted RBP23.64■■□□□ 1.37
NCAM1-224ENST00000617166 MSH5O43196 834 aa23.29■■□□□ 1.32
NCAM1-224ENST00000617166 SCAF1Q9H7N4 1312 aaKnown RBP22.1■■□□□ 1.13
NCAM1-224ENST00000617166 PPP4R3CPQ6ZMV5 832 aa22.1■■□□□ 1.13
NCAM1-224ENST00000617166 MAPK8IP2Q13387 824 aaPredicted RBP21.74■■□□□ 1.07
NCAM1-224ENST00000617166 DMRT2Q9Y5R5 561 aa21.61■■□□□ 1.05
NCAM1-224ENST00000617166 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
NCAM1-224ENST00000617166 CNKSR2Q8WXI2 1034 aa21.56■■□□□ 1.04
NCAM1-224ENST00000617166 KCNA4P22459 653 aa21.41■■□□□ 1.02
NCAM1-224ENST00000617166 POTEDQ86YR6 584 aa21.3■■□□□ 1
NCAM1-224ENST00000617166 RNF216Q9NWF9 866 aaPredicted RBP21.18■□□□□ 0.98
NCAM1-224ENST00000617166 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
NCAM1-224ENST00000617166 HOXD11P31277 338 aaPredicted RBP21.12■□□□□ 0.97
NCAM1-224ENST00000617166 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
NCAM1-224ENST00000617166 DCAF8L1A6NGE4 600 aa20.57■□□□□ 0.88
NCAM1-224ENST00000617166 SLC4A1APQ9BWU0 796 aaKnown RBP20.42■□□□□ 0.86
NCAM1-224ENST00000617166 NISCHQ9Y2I1 1504 aa20.35■□□□□ 0.85
NCAM1-224ENST00000617166 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
NCAM1-224ENST00000617166 SLC4A2P04920 1241 aa19.99■□□□□ 0.79
NCAM1-224ENST00000617166 RNF39Q9H2S5 420 aa19.89■□□□□ 0.77
NCAM1-224ENST00000617166 FOXD4L1Q9NU39 408 aa19.82■□□□□ 0.76
NCAM1-224ENST00000617166 U3KPZ7 1027 aaPredicted RBP19.74■□□□□ 0.75
NCAM1-224ENST00000617166 C1QBPQ07021 282 aaKnown RBP19.7■□□□□ 0.74
NCAM1-224ENST00000617166 ZBTB22O15209 634 aa19.68■□□□□ 0.74
NCAM1-224ENST00000617166 MYCNP04198 464 aaPredicted RBP19.63■□□□□ 0.73
NCAM1-224ENST00000617166 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
NCAM1-224ENST00000617166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.58■□□□□ 0.72
NCAM1-224ENST00000617166 HNRNPUL2Q1KMD3 747 aaKnown RBP19.58■□□□□ 0.72
NCAM1-224ENST00000617166 CSRNP3Q8WYN3 585 aa19.49■□□□□ 0.71
NCAM1-224ENST00000617166 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
NCAM1-224ENST00000617166 APLP2Q06481 763 aa19.44■□□□□ 0.7
NCAM1-224ENST00000617166 CACNB1Q02641 598 aaPredicted RBP19.42■□□□□ 0.7
NCAM1-224ENST00000617166 ATXN8OSP0DMR3 200 aa19.22■□□□□ 0.67
NCAM1-224ENST00000617166 SPINK5Q9NQ38 1064 aaPredicted RBP19.16■□□□□ 0.66
NCAM1-224ENST00000617166 CAPN15O75808 1086 aa19.13■□□□□ 0.65
NCAM1-224ENST00000617166 ZNF219Q9P2Y4 722 aaPredicted RBP19.11■□□□□ 0.65
NCAM1-224ENST00000617166 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
NCAM1-224ENST00000617166 ATF5Q9Y2D1 282 aaPredicted RBP18.97■□□□□ 0.63
NCAM1-224ENST00000617166 DSG3P32926 999 aa18.86■□□□□ 0.61
NCAM1-224ENST00000617166 ABCC9O60706 1549 aa18.85■□□□□ 0.61
NCAM1-224ENST00000617166 ABCB7O75027 752 aa18.7■□□□□ 0.58
NCAM1-224ENST00000617166 POLA2Q14181 598 aa18.68■□□□□ 0.58
NCAM1-224ENST00000617166 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.56
NCAM1-224ENST00000617166 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
NCAM1-224ENST00000617166 FBLN2P98095 1184 aa18.33■□□□□ 0.52
NCAM1-224ENST00000617166 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
NCAM1-224ENST00000617166 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
NCAM1-224ENST00000617166 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
NCAM1-224ENST00000617166 SPDYE2BA6NHP3 402 aa17.96■□□□□ 0.47
NCAM1-224ENST00000617166 SPDYE6P0CI01 402 aa17.96■□□□□ 0.47
NCAM1-224ENST00000617166 SPDYE2Q495Y8 402 aa17.96■□□□□ 0.47
NCAM1-224ENST00000617166 ZNF692Q9BU19 519 aaPredicted RBP17.8■□□□□ 0.44
NCAM1-224ENST00000617166 AKT1S1Q96B36 256 aa17.79■□□□□ 0.44
NCAM1-224ENST00000617166 SSUH2Q9Y2M2 353 aa17.78■□□□□ 0.44
NCAM1-224ENST00000617166 SPDYE4A6NLX3 237 aa17.77■□□□□ 0.44
NCAM1-224ENST00000617166 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
NCAM1-224ENST00000617166 FKBP8Q14318 412 aa17.63■□□□□ 0.41
NCAM1-224ENST00000617166 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
NCAM1-224ENST00000617166 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
NCAM1-224ENST00000617166 PROM2Q8N271 834 aa17.52■□□□□ 0.4
NCAM1-224ENST00000617166 NACADO15069 1562 aa17.51■□□□□ 0.39
NCAM1-224ENST00000617166 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
NCAM1-224ENST00000617166 SPDYE1Q8NFV5 336 aaPredicted RBP17.44■□□□□ 0.38
NCAM1-224ENST00000617166 PITPNM1O00562 1244 aa17.35■□□□□ 0.37
NCAM1-224ENST00000617166 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
NCAM1-224ENST00000617166 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
NCAM1-224ENST00000617166 CHRDL2Q6WN34 429 aa17.29■□□□□ 0.36
NCAM1-224ENST00000617166 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
NCAM1-224ENST00000617166 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
NCAM1-224ENST00000617166 FBXO3Q9UK99 471 aa17.17■□□□□ 0.34
NCAM1-224ENST00000617166 PRR29P0C7W0 189 aa17.15■□□□□ 0.34
NCAM1-224ENST00000617166 MYO15BQ96JP2 1530 aa17.11■□□□□ 0.33
NCAM1-224ENST00000617166 FXR2P51116 673 aaKnown RBP eCLIP17.09■□□□□ 0.33
NCAM1-224ENST00000617166 CC2D2AQ9P2K1 1620 aa17.03■□□□□ 0.32
NCAM1-224ENST00000617166 PIP4P2Q8N4L2 257 aa17.02■□□□□ 0.32
NCAM1-224ENST00000617166 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
NCAM1-224ENST00000617166 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
NCAM1-224ENST00000617166 PRKAR2AP13861 404 aaKnown RBP16.91■□□□□ 0.3
NCAM1-224ENST00000617166 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
NCAM1-224ENST00000617166 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
NCAM1-224ENST00000617166 PLEKHG5O94827 1062 aa16.87■□□□□ 0.29
NCAM1-224ENST00000617166 VASPP50552 380 aaPredicted RBP16.87■□□□□ 0.29
NCAM1-224ENST00000617166 POTEHQ6S545 545 aa16.86■□□□□ 0.29
NCAM1-224ENST00000617166 MIER1Q8N108 512 aa16.84■□□□□ 0.29
NCAM1-224ENST00000617166 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
NCAM1-224ENST00000617166 PLCD3Q8N3E9 789 aa16.82■□□□□ 0.28
NCAM1-224ENST00000617166 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
NCAM1-224ENST00000617166 ZCCHC6Q5VYS8 1495 aaKnown RBP16.8■□□□□ 0.28
NCAM1-224ENST00000617166 DNAJC5Q9H3Z4 198 aa16.78■□□□□ 0.28
NCAM1-224ENST00000617166 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
NCAM1-224ENST00000617166 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
NCAM1-224ENST00000617166 FARP1Q9Y4F1 1045 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms