RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 CC2D1BQ5T0F9 858 aaKnown RBP11.59□□□□□ -0.55
PCDH15-229ENST00000616114 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
PCDH15-229ENST00000616114 NOP58Q9Y2X3 529 aaKnown RBP11.59□□□□□ -0.55
PCDH15-229ENST00000616114 RAD54L2Q9Y4B4 1467 aa11.58□□□□□ -0.56
PCDH15-229ENST00000616114 PEG3Q9GZU2 1588 aa11.58□□□□□ -0.56
PCDH15-229ENST00000616114 MS4A1P11836 297 aa11.58□□□□□ -0.56
PCDH15-229ENST00000616114 NUDCQ9Y266 331 aa11.58□□□□□ -0.56
PCDH15-229ENST00000616114 EFCAB2Q5VUJ9 269 aa11.57□□□□□ -0.56
PCDH15-229ENST00000616114 BCL11AQ9H165 835 aa11.57□□□□□ -0.56
PCDH15-229ENST00000616114 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
PCDH15-229ENST00000616114 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
PCDH15-229ENST00000616114 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
PCDH15-229ENST00000616114 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
PCDH15-229ENST00000616114 JPH4Q96JJ6 628 aa11.54□□□□□ -0.56
PCDH15-229ENST00000616114 CHMP4BQ9H444 224 aaKnown RBP11.54□□□□□ -0.56
PCDH15-229ENST00000616114 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
PCDH15-229ENST00000616114 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
PCDH15-229ENST00000616114 EIF3AQ14152 1382 aaKnown RBP11.53□□□□□ -0.56
PCDH15-229ENST00000616114 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.53□□□□□ -0.56
PCDH15-229ENST00000616114 BICRAQ9NZM4 1560 aa11.53□□□□□ -0.56
PCDH15-229ENST00000616114 NCOA2Q15596 1464 aa11.53□□□□□ -0.56
PCDH15-229ENST00000616114 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
PCDH15-229ENST00000616114 NLRP13Q86W25 1043 aa11.52□□□□□ -0.57
PCDH15-229ENST00000616114 RCAN3Q9UKA8 241 aa11.52□□□□□ -0.57
PCDH15-229ENST00000616114 FTSJ3Q8IY81 847 aaKnown RBP11.52□□□□□ -0.57
PCDH15-229ENST00000616114 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
PCDH15-229ENST00000616114 TCERG1O14776 1098 aaKnown RBP11.5□□□□□ -0.57
PCDH15-229ENST00000616114 MAP3K1Q13233 1512 aa11.5□□□□□ -0.57
PCDH15-229ENST00000616114 ZBED9Q6R2W3 1325 aa11.5□□□□□ -0.57
PCDH15-229ENST00000616114 EHBP1L1Q8N3D4 1523 aa11.5□□□□□ -0.57
PCDH15-229ENST00000616114 HNRNPMP52272 730 aaKnown RBP eCLIP11.49□□□□□ -0.57
PCDH15-229ENST00000616114 MYBBP1AQ9BQG0 1328 aaKnown RBP11.49□□□□□ -0.57
PCDH15-229ENST00000616114 SENP3-EIF4A1A0A087X0R7 540 aa11.49□□□□□ -0.57
PCDH15-229ENST00000616114 POGKQ9P215 609 aa11.48□□□□□ -0.57
PCDH15-229ENST00000616114 CCDC144AA2RUR9 1427 aa11.48□□□□□ -0.57
PCDH15-229ENST00000616114 DNMBPQ6XZF7 1577 aa11.47□□□□□ -0.57
PCDH15-229ENST00000616114 MORC1Q86VD1 984 aa11.47□□□□□ -0.57
PCDH15-229ENST00000616114 TOPBP1Q92547 1522 aa11.47□□□□□ -0.57
PCDH15-229ENST00000616114 USP47Q96K76 1375 aa11.47□□□□□ -0.57
PCDH15-229ENST00000616114 GRIN2BQ13224 1484 aa11.47□□□□□ -0.57
PCDH15-229ENST00000616114 MIA2Q96PC5 1412 aa11.46□□□□□ -0.57
PCDH15-229ENST00000616114 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
PCDH15-229ENST00000616114 CNTLNQ9NXG0 1405 aa11.45□□□□□ -0.58
PCDH15-229ENST00000616114 BIVM-ERCC5R4GMW8 1640 aa11.45□□□□□ -0.58
PCDH15-229ENST00000616114 AQRO60306 1485 aaKnown RBP eCLIP11.45□□□□□ -0.58
PCDH15-229ENST00000616114 NEUROD2Q15784 382 aa11.45□□□□□ -0.58
PCDH15-229ENST00000616114 CCDC7Q96M83 1385 aa11.45□□□□□ -0.58
PCDH15-229ENST00000616114 PTPRGP23470 1445 aa11.45□□□□□ -0.58
PCDH15-229ENST00000616114 GOLGA6L22H0YM25 854 aa11.45□□□□□ -0.58
PCDH15-229ENST00000616114 RGS3P49796 1198 aa11.44□□□□□ -0.58
PCDH15-229ENST00000616114 FRAT1Q92837 279 aaPredicted RBP11.44□□□□□ -0.58
PCDH15-229ENST00000616114 SPAG9O60271 1321 aaKnown RBP11.44□□□□□ -0.58
PCDH15-229ENST00000616114 POLA1P09884 1462 aaPredicted RBP11.44□□□□□ -0.58
PCDH15-229ENST00000616114 CASC1Q6TDU7 716 aa11.43□□□□□ -0.58
PCDH15-229ENST00000616114 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
PCDH15-229ENST00000616114 ST20-MTHFSA0A0A6YYL1 179 aa11.43□□□□□ -0.58
PCDH15-229ENST00000616114 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
PCDH15-229ENST00000616114 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
PCDH15-229ENST00000616114 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
PCDH15-229ENST00000616114 CC2D2AQ9P2K1 1620 aa11.41□□□□□ -0.58
PCDH15-229ENST00000616114 CUL7Q14999 1698 aa11.41□□□□□ -0.58
PCDH15-229ENST00000616114 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
PCDH15-229ENST00000616114 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
PCDH15-229ENST00000616114 SUPT6HQ7KZ85 1726 aaKnown RBP11.41□□□□□ -0.58
PCDH15-229ENST00000616114 U2SURPO15042 1029 aaKnown RBP11.4□□□□□ -0.58
PCDH15-229ENST00000616114 CFAP44Q96MT7 982 aa11.4□□□□□ -0.58
PCDH15-229ENST00000616114 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
PCDH15-229ENST00000616114 LAS1LQ9Y4W2 734 aaKnown RBP11.4□□□□□ -0.58
PCDH15-229ENST00000616114 PRDM2Q13029 1718 aa11.39□□□□□ -0.59
PCDH15-229ENST00000616114 IFT140Q96RY7 1462 aa11.39□□□□□ -0.59
PCDH15-229ENST00000616114 ANKRD50Q9ULJ7 1429 aa11.39□□□□□ -0.59
PCDH15-229ENST00000616114 KIF3BO15066 747 aa11.38□□□□□ -0.59
PCDH15-229ENST00000616114 SRPK2P78362 688 aaKnown RBP11.38□□□□□ -0.59
PCDH15-229ENST00000616114 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
PCDH15-229ENST00000616114 KIF7Q2M1P5 1343 aa11.38□□□□□ -0.59
PCDH15-229ENST00000616114 HDGFL2Q7Z4V5 671 aaPredicted RBP11.38□□□□□ -0.59
PCDH15-229ENST00000616114 IPO9Q96P70 1041 aaKnown RBP11.38□□□□□ -0.59
PCDH15-229ENST00000616114 UNC13AQ9UPW8 1703 aa11.38□□□□□ -0.59
PCDH15-229ENST00000616114 IPO8O15397 1037 aaKnown RBP11.38□□□□□ -0.59
PCDH15-229ENST00000616114 CALD1Q05682 793 aaKnown RBP11.37□□□□□ -0.59
PCDH15-229ENST00000616114 NGEFQ8N5V2 710 aa11.37□□□□□ -0.59
PCDH15-229ENST00000616114 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
PCDH15-229ENST00000616114 GLIPR1L2Q4G1C9 344 aa11.37□□□□□ -0.59
PCDH15-229ENST00000616114 GGT6Q6P531 493 aa11.37□□□□□ -0.59
PCDH15-229ENST00000616114 NCLP19338 710 aaKnown RBP11.36□□□□□ -0.59
PCDH15-229ENST00000616114 PMFBP1Q8TBY8 1022 aa11.36□□□□□ -0.59
PCDH15-229ENST00000616114 RWDD1Q9H446 243 aaPredicted RBP11.36□□□□□ -0.59
PCDH15-229ENST00000616114 WASHC2AQ641Q2 1341 aa11.36□□□□□ -0.59
PCDH15-229ENST00000616114 PANK3Q9H999 370 aa11.36□□□□□ -0.59
PCDH15-229ENST00000616114 PCF11O94913 1555 aaKnown RBP11.36□□□□□ -0.59
PCDH15-229ENST00000616114 DEKP35659 375 aaKnown RBP11.35□□□□□ -0.59
PCDH15-229ENST00000616114 TRIM44Q96DX7 344 aaPredicted RBP11.35□□□□□ -0.59
PCDH15-229ENST00000616114 ZNF644Q9H582 1327 aaPredicted RBP11.35□□□□□ -0.59
PCDH15-229ENST00000616114 NESP48681 1621 aa11.35□□□□□ -0.59
PCDH15-229ENST00000616114 RRP1P56182 461 aaKnown RBP11.34□□□□□ -0.59
PCDH15-229ENST00000616114 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
PCDH15-229ENST00000616114 ROCK1Q13464 1354 aa11.34□□□□□ -0.59
PCDH15-229ENST00000616114 PLPPR3Q6T4P5 718 aa11.34□□□□□ -0.59
PCDH15-229ENST00000616114 BRD4O60885 1362 aaPredicted RBP11.33□□□□□ -0.6
PCDH15-229ENST00000616114 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms