RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 RALBP1Q15311 655 aa18.8■□□□□ 0.6
LINC02538-201ENST00000609107 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
LINC02538-201ENST00000609107 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
LINC02538-201ENST00000609107 CFAP53Q96M91 514 aa18.79■□□□□ 0.6
LINC02538-201ENST00000609107 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
LINC02538-201ENST00000609107 RBM19Q9Y4C8 960 aaKnown RBP18.78■□□□□ 0.6
LINC02538-201ENST00000609107 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
LINC02538-201ENST00000609107 EFCAB2Q5VUJ9 269 aa18.77■□□□□ 0.6
LINC02538-201ENST00000609107 TSHZ2Q9NRE2 1034 aa18.77■□□□□ 0.6
LINC02538-201ENST00000609107 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.59
LINC02538-201ENST00000609107 HNRNPMP52272 730 aaKnown RBP eCLIP18.76■□□□□ 0.59
LINC02538-201ENST00000609107 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
LINC02538-201ENST00000609107 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
LINC02538-201ENST00000609107 BIVM-ERCC5R4GMW8 1640 aa18.74■□□□□ 0.59
LINC02538-201ENST00000609107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.73■□□□□ 0.59
LINC02538-201ENST00000609107 NESP48681 1621 aa18.72■□□□□ 0.59
LINC02538-201ENST00000609107 PRKRIP1Q9H875 184 aaPredicted RBP18.72■□□□□ 0.59
LINC02538-201ENST00000609107 AQRO60306 1485 aaKnown RBP eCLIP18.71■□□□□ 0.59
LINC02538-201ENST00000609107 MAP3K1Q13233 1512 aa18.71■□□□□ 0.58
LINC02538-201ENST00000609107 GRIN2BQ13224 1484 aa18.7■□□□□ 0.58
LINC02538-201ENST00000609107 NUDCQ9Y266 331 aa18.69■□□□□ 0.58
LINC02538-201ENST00000609107 ABCA10Q8WWZ4 1543 aa18.69■□□□□ 0.58
LINC02538-201ENST00000609107 EHBP1L1Q8N3D4 1523 aa18.68■□□□□ 0.58
LINC02538-201ENST00000609107 HFM1A2PYH4 1435 aa18.67■□□□□ 0.58
LINC02538-201ENST00000609107 PTPRGP23470 1445 aa18.65■□□□□ 0.58
LINC02538-201ENST00000609107 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
LINC02538-201ENST00000609107 NOP58Q9Y2X3 529 aaKnown RBP18.65■□□□□ 0.58
LINC02538-201ENST00000609107 KIF15Q9NS87 1388 aa18.65■□□□□ 0.58
LINC02538-201ENST00000609107 USP47Q96K76 1375 aa18.65■□□□□ 0.58
LINC02538-201ENST00000609107 HSP90AA1P07900 732 aaKnown RBP18.64■□□□□ 0.57
LINC02538-201ENST00000609107 ZNF644Q9H582 1327 aaPredicted RBP18.63■□□□□ 0.57
LINC02538-201ENST00000609107 CCDC144AA2RUR9 1427 aa18.63■□□□□ 0.57
LINC02538-201ENST00000609107 MIA2Q96PC5 1412 aa18.63■□□□□ 0.57
LINC02538-201ENST00000609107 RCAN3Q9UKA8 241 aa18.62■□□□□ 0.57
LINC02538-201ENST00000609107 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
LINC02538-201ENST00000609107 CCDC7Q96M83 1385 aa18.62■□□□□ 0.57
LINC02538-201ENST00000609107 ST20-MTHFSA0A0A6YYL1 179 aa18.62■□□□□ 0.57
LINC02538-201ENST00000609107 BECN1Q14457 450 aa18.61■□□□□ 0.57
LINC02538-201ENST00000609107 PDE3BQ13370 1112 aa18.6■□□□□ 0.57
LINC02538-201ENST00000609107 PPM1GO15355 546 aaPredicted RBP18.59■□□□□ 0.57
LINC02538-201ENST00000609107 NEUROD2Q15784 382 aa18.59■□□□□ 0.57
LINC02538-201ENST00000609107 MYBBP1AQ9BQG0 1328 aaKnown RBP18.59■□□□□ 0.57
LINC02538-201ENST00000609107 SPAG9O60271 1321 aaKnown RBP18.59■□□□□ 0.57
LINC02538-201ENST00000609107 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
LINC02538-201ENST00000609107 CNTLNQ9NXG0 1405 aa18.59■□□□□ 0.57
LINC02538-201ENST00000609107 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.56
LINC02538-201ENST00000609107 ARID4BQ4LE39 1312 aaPredicted RBP18.57■□□□□ 0.56
LINC02538-201ENST00000609107 CUL7Q14999 1698 aa18.57■□□□□ 0.56
LINC02538-201ENST00000609107 MRC2Q9UBG0 1479 aa18.57■□□□□ 0.56
LINC02538-201ENST00000609107 MAPK8IP3Q9UPT6 1336 aa18.57■□□□□ 0.56
LINC02538-201ENST00000609107 PRDM2Q13029 1718 aa18.57■□□□□ 0.56
LINC02538-201ENST00000609107 SENP3Q9H4L4 574 aaPredicted RBP18.56■□□□□ 0.56
LINC02538-201ENST00000609107 MYH16Q9H6N6 1097 aa18.56■□□□□ 0.56
LINC02538-201ENST00000609107 POGKQ9P215 609 aa18.56■□□□□ 0.56
LINC02538-201ENST00000609107 HECW1Q76N89 1606 aa18.56■□□□□ 0.56
LINC02538-201ENST00000609107 WASHC2AQ641Q2 1341 aa18.55■□□□□ 0.56
LINC02538-201ENST00000609107 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
LINC02538-201ENST00000609107 ANKRD50Q9ULJ7 1429 aa18.55■□□□□ 0.56
LINC02538-201ENST00000609107 KIF7Q2M1P5 1343 aa18.55■□□□□ 0.56
LINC02538-201ENST00000609107 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
LINC02538-201ENST00000609107 MORC1Q86VD1 984 aa18.55■□□□□ 0.56
LINC02538-201ENST00000609107 SUPT6HQ7KZ85 1726 aaKnown RBP18.55■□□□□ 0.56
LINC02538-201ENST00000609107 FTSJ3Q8IY81 847 aaKnown RBP18.54■□□□□ 0.56
LINC02538-201ENST00000609107 KIF3BO15066 747 aa18.53■□□□□ 0.56
LINC02538-201ENST00000609107 MS4A1P11836 297 aa18.53■□□□□ 0.56
LINC02538-201ENST00000609107 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
LINC02538-201ENST00000609107 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
LINC02538-201ENST00000609107 RGS3P49796 1198 aa18.52■□□□□ 0.56
LINC02538-201ENST00000609107 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
LINC02538-201ENST00000609107 NAIPQ13075 1403 aa18.51■□□□□ 0.55
LINC02538-201ENST00000609107 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
LINC02538-201ENST00000609107 GGT6Q6P531 493 aa18.51■□□□□ 0.55
LINC02538-201ENST00000609107 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
LINC02538-201ENST00000609107 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
LINC02538-201ENST00000609107 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
LINC02538-201ENST00000609107 TROQ12816 1431 aaPredicted RBP18.47■□□□□ 0.55
LINC02538-201ENST00000609107 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
LINC02538-201ENST00000609107 EPRSP07814 1512 aaKnown RBP18.46■□□□□ 0.55
LINC02538-201ENST00000609107 PANK3Q9H999 370 aa18.46■□□□□ 0.55
LINC02538-201ENST00000609107 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
LINC02538-201ENST00000609107 SRPK2P78362 688 aaKnown RBP18.44■□□□□ 0.54
LINC02538-201ENST00000609107 DAPK1P53355 1430 aa18.43■□□□□ 0.54
LINC02538-201ENST00000609107 CHMP4BQ9H444 224 aaKnown RBP18.43■□□□□ 0.54
LINC02538-201ENST00000609107 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
LINC02538-201ENST00000609107 KIAA0586Q9BVV6 1533 aa18.43■□□□□ 0.54
LINC02538-201ENST00000609107 ROCK1Q13464 1354 aa18.42■□□□□ 0.54
LINC02538-201ENST00000609107 IQGAP2Q13576 1575 aa18.42■□□□□ 0.54
LINC02538-201ENST00000609107 KIAA1107Q9UPP5 1409 aa18.42■□□□□ 0.54
LINC02538-201ENST00000609107 SYNJ2O15056 1496 aa18.4■□□□□ 0.54
LINC02538-201ENST00000609107 PRG4Q92954 1404 aaPredicted RBP18.4■□□□□ 0.54
LINC02538-201ENST00000609107 SNAPC4Q5SXM2 1469 aa18.4■□□□□ 0.54
LINC02538-201ENST00000609107 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
LINC02538-201ENST00000609107 NBPF8Q3BBV2 869 aa18.39■□□□□ 0.53
LINC02538-201ENST00000609107 STAC3Q96MF2 364 aa18.39■□□□□ 0.53
LINC02538-201ENST00000609107 CDK13Q14004 1512 aaKnown RBP18.38■□□□□ 0.53
LINC02538-201ENST00000609107 PTPN23Q9H3S7 1636 aa18.37■□□□□ 0.53
LINC02538-201ENST00000609107 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
LINC02538-201ENST00000609107 SAFB2Q14151 953 aaKnown RBP eCLIP18.37■□□□□ 0.53
LINC02538-201ENST00000609107 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
LINC02538-201ENST00000609107 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms