RNA–Protein interactions for RNA: ENST00000604440.5

SH3D19-212, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-212ENST00000604440 SLAIN1Q8ND83 568 aa16.05■□□□□ 0.16
SH3D19-212ENST00000604440 PLSCR2Q9NRY7 297 aa16.05■□□□□ 0.16
SH3D19-212ENST00000604440 PDCD7Q8N8D1 485 aaKnown RBP16.04■□□□□ 0.16
SH3D19-212ENST00000604440 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
SH3D19-212ENST00000604440 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
SH3D19-212ENST00000604440 PDAP1Q13442 181 aaKnown RBP16.01■□□□□ 0.15
SH3D19-212ENST00000604440 GOLGA2Q08379 1002 aa16■□□□□ 0.15
SH3D19-212ENST00000604440 MKRN3Q13064 507 aaKnown RBP15.99■□□□□ 0.15
SH3D19-212ENST00000604440 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
SH3D19-212ENST00000604440 TOPBP1Q92547 1522 aa15.95■□□□□ 0.14
SH3D19-212ENST00000604440 PCDH10Q9P2E7 1040 aa15.95■□□□□ 0.14
SH3D19-212ENST00000604440 CHD1O14646 1710 aa15.93■□□□□ 0.14
SH3D19-212ENST00000604440 ILDR1Q86SU0 546 aaPredicted RBP15.92■□□□□ 0.14
SH3D19-212ENST00000604440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.143e-6■□□□□ 9.2
SH3D19-212ENST00000604440 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.91■□□□□ 0.14
SH3D19-212ENST00000604440 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
SH3D19-212ENST00000604440 TARBP1Q13395 1621 aaKnown RBP15.9■□□□□ 0.14
SH3D19-212ENST00000604440 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
SH3D19-212ENST00000604440 ARAP1Q96P48 1450 aa15.89■□□□□ 0.13
SH3D19-212ENST00000604440 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
SH3D19-212ENST00000604440 CCDC88BA6NC98 1476 aa15.87■□□□□ 0.13
SH3D19-212ENST00000604440 ST18O60284 1047 aa15.87■□□□□ 0.13
SH3D19-212ENST00000604440 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
SH3D19-212ENST00000604440 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
SH3D19-212ENST00000604440 C3orf67Q6ZVT6 689 aa15.83■□□□□ 0.12
SH3D19-212ENST00000604440 DPY19L2Q6NUT2 758 aa15.79■□□□□ 0.12
SH3D19-212ENST00000604440 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
SH3D19-212ENST00000604440 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.11
SH3D19-212ENST00000604440 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.118e-8■■■■□ 24.7
SH3D19-212ENST00000604440 POLA1P09884 1462 aaPredicted RBP15.77■□□□□ 0.11
SH3D19-212ENST00000604440 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
SH3D19-212ENST00000604440 RNF25Q96BH1 459 aaPredicted RBP15.76■□□□□ 0.11
SH3D19-212ENST00000604440 SNPHO15079 494 aa15.75■□□□□ 0.11
SH3D19-212ENST00000604440 TMEM121BQ9BXQ6 578 aaPredicted RBP15.72■□□□□ 0.11
SH3D19-212ENST00000604440 CDAN1Q8IWY9 1227 aa15.71■□□□□ 0.11
SH3D19-212ENST00000604440 RIOK3O14730 519 aaKnown RBP15.7■□□□□ 0.1
SH3D19-212ENST00000604440 EFCAB3Q8N7B9 438 aa15.7■□□□□ 0.1
SH3D19-212ENST00000604440 BOLA1Q9Y3E2 137 aa15.69■□□□□ 0.1
SH3D19-212ENST00000604440 SYNJ1O43426 1573 aa15.66■□□□□ 0.1
SH3D19-212ENST00000604440 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
SH3D19-212ENST00000604440 MAGI1Q96QZ7 1491 aaPredicted RBP15.65■□□□□ 0.1
SH3D19-212ENST00000604440 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
SH3D19-212ENST00000604440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.63■□□□□ 0.09
SH3D19-212ENST00000604440 ZFP91Q96JP5 570 aaPredicted RBP15.63■□□□□ 0.09
SH3D19-212ENST00000604440 G3V3G9 751 aa15.62■□□□□ 0.09
SH3D19-212ENST00000604440 VGFO15240 615 aaPredicted RBP15.62■□□□□ 0.09
SH3D19-212ENST00000604440 MARVELD3Q96A59 401 aa15.61■□□□□ 0.09
SH3D19-212ENST00000604440 SOGA1O94964 1423 aa15.6■□□□□ 0.09
SH3D19-212ENST00000604440 FGD5Q6ZNL6 1462 aa15.59■□□□□ 0.09
SH3D19-212ENST00000604440 TDRD9Q8NDG6 1382 aaKnown RBP15.59■□□□□ 0.09
SH3D19-212ENST00000604440 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
SH3D19-212ENST00000604440 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
SH3D19-212ENST00000604440 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
SH3D19-212ENST00000604440 CUX1P39880 1505 aa15.56■□□□□ 0.08
SH3D19-212ENST00000604440 SOX12O15370 315 aa15.53■□□□□ 0.08
SH3D19-212ENST00000604440 MS4A4AQ96JQ5 239 aa15.53■□□□□ 0.08
SH3D19-212ENST00000604440 GAPVD1Q14C86 1478 aa15.52■□□□□ 0.07
SH3D19-212ENST00000604440 ABCA5Q8WWZ7 1642 aa15.51■□□□□ 0.07
SH3D19-212ENST00000604440 HOXB3P14651 431 aaPredicted RBP15.51■□□□□ 0.07
SH3D19-212ENST00000604440 EMP3P54852 163 aa15.5■□□□□ 0.07
SH3D19-212ENST00000604440 MICALL2Q8IY33 904 aa15.5■□□□□ 0.07
SH3D19-212ENST00000604440 PHF8Q9UPP1 1060 aa15.49■□□□□ 0.07
SH3D19-212ENST00000604440 CHMP7Q8WUX9 453 aaPredicted RBP15.48■□□□□ 0.07
SH3D19-212ENST00000604440 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
SH3D19-212ENST00000604440 BCL11BQ9C0K0 894 aaPredicted RBP15.45■□□□□ 0.06
SH3D19-212ENST00000604440 TMEM92Q6UXU6 159 aa15.44■□□□□ 0.06
SH3D19-212ENST00000604440 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
SH3D19-212ENST00000604440 ERCC6L2Q5T890 1561 aa15.42■□□□□ 0.06
SH3D19-212ENST00000604440 POTEB3A0JP26 581 aa15.42■□□□□ 0.06
SH3D19-212ENST00000604440 POTEBQ6S5H4 581 aa15.42■□□□□ 0.06
SH3D19-212ENST00000604440 TAOK2Q9UL54 1235 aa15.42■□□□□ 0.06
SH3D19-212ENST00000604440 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
SH3D19-212ENST00000604440 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
SH3D19-212ENST00000604440 HS3ST6Q96QI5 342 aa15.4■□□□□ 0.06
SH3D19-212ENST00000604440 KIF13AQ9H1H9 1805 aa15.39■□□□□ 0.05
SH3D19-212ENST00000604440 FBXO22Q8NEZ5 403 aa15.39■□□□□ 0.05
SH3D19-212ENST00000604440 NUP160Q12769 1436 aa15.39■□□□□ 0.05
SH3D19-212ENST00000604440 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
SH3D19-212ENST00000604440 GRIN2AQ12879 1464 aa15.39■□□□□ 0.05
SH3D19-212ENST00000604440 FAM205CA6NFA0 338 aa15.38■□□□□ 0.05
SH3D19-212ENST00000604440 PKD2Q13563 968 aa15.38■□□□□ 0.05
SH3D19-212ENST00000604440 DOK7Q18PE1 504 aa15.38■□□□□ 0.05
SH3D19-212ENST00000604440 STK24Q9Y6E0 443 aa15.38■□□□□ 0.05
SH3D19-212ENST00000604440 NLRP6P59044 892 aa15.36■□□□□ 0.05
SH3D19-212ENST00000604440 HOXB1P14653 301 aaPredicted RBP15.35■□□□□ 0.05
SH3D19-212ENST00000604440 ZNF710Q8N1W2 664 aa15.35■□□□□ 0.05
SH3D19-212ENST00000604440 STK25O00506 426 aa15.34■□□□□ 0.05
SH3D19-212ENST00000604440 SPNS2Q8IVW8 549 aa15.34■□□□□ 0.05
SH3D19-212ENST00000604440 RGL2O15211 777 aa15.33■□□□□ 0.04
SH3D19-212ENST00000604440 MFRPQ9BY79 579 aa15.33■□□□□ 0.04
SH3D19-212ENST00000604440 KRTAP3-3Q9BYR6 98 aa15.32■□□□□ 0.04
SH3D19-212ENST00000604440 KRTAP3-2Q9BYR7 98 aa15.32■□□□□ 0.04
SH3D19-212ENST00000604440 BIVM-ERCC5R4GMW8 1640 aa15.3■□□□□ 0.04
SH3D19-212ENST00000604440 MMRN1Q13201 1228 aa15.29■□□□□ 0.04
SH3D19-212ENST00000604440 RIMBP2O15034 1052 aa15.27■□□□□ 0.04
SH3D19-212ENST00000604440 TOP2BQ02880 1626 aa15.26■□□□□ 0.03
SH3D19-212ENST00000604440 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
SH3D19-212ENST00000604440 FHAD1B1AJZ9 1412 aa15.26■□□□□ 0.03
SH3D19-212ENST00000604440 WRNQ14191 1432 aaPredicted RBP eCLIP15.24■□□□□ 0.03
SH3D19-212ENST00000604440 ZSWIM6Q9HCJ5 1215 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms