RNA–Protein interactions for RNA: ENST00000588831.5

LRFN3-204, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRFN3, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-204ENST00000588831 ZMYND15Q9H091 742 aa16.34■□□□□ 0.21
LRFN3-204ENST00000588831 FGD6Q6ZV73 1430 aa16.34■□□□□ 0.21
LRFN3-204ENST00000588831 BIVM-ERCC5R4GMW8 1640 aa16.34■□□□□ 0.21
LRFN3-204ENST00000588831 TMC1Q8TDI8 760 aa16.33■□□□□ 0.2
LRFN3-204ENST00000588831 SKAP1Q86WV1 359 aa16.32■□□□□ 0.2
LRFN3-204ENST00000588831 AKNAQ7Z591 1439 aa16.3■□□□□ 0.2
LRFN3-204ENST00000588831 POLA1P09884 1462 aaPredicted RBP16.28■□□□□ 0.2
LRFN3-204ENST00000588831 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
LRFN3-204ENST00000588831 RGL3Q3MIN7 710 aa16.27■□□□□ 0.2
LRFN3-204ENST00000588831 ARID3AQ99856 593 aa16.27■□□□□ 0.2
LRFN3-204ENST00000588831 KIF7Q2M1P5 1343 aa16.26■□□□□ 0.19
LRFN3-204ENST00000588831 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
LRFN3-204ENST00000588831 UACAQ9BZF9 1416 aa16.24■□□□□ 0.19
LRFN3-204ENST00000588831 NAIPQ13075 1403 aa16.23■□□□□ 0.19
LRFN3-204ENST00000588831 FMN1Q68DA7 1419 aa16.23■□□□□ 0.19
LRFN3-204ENST00000588831 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
LRFN3-204ENST00000588831 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
LRFN3-204ENST00000588831 PLIN1O60240 522 aa16.22■□□□□ 0.19
LRFN3-204ENST00000588831 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
LRFN3-204ENST00000588831 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.21■□□□□ 0.19
LRFN3-204ENST00000588831 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
LRFN3-204ENST00000588831 IPO9Q96P70 1041 aaKnown RBP16.2■□□□□ 0.18
LRFN3-204ENST00000588831 RSPH6AQ9H0K4 717 aa16.19■□□□□ 0.18
LRFN3-204ENST00000588831 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
LRFN3-204ENST00000588831 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
LRFN3-204ENST00000588831 CARD11Q9BXL7 1154 aa16.18■□□□□ 0.18
LRFN3-204ENST00000588831 PKD2Q13563 968 aa16.18■□□□□ 0.18
LRFN3-204ENST00000588831 CASKIN1Q8WXD9 1431 aa16.18■□□□□ 0.18
LRFN3-204ENST00000588831 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
LRFN3-204ENST00000588831 SLC4A3P48751 1232 aa16.16■□□□□ 0.18
LRFN3-204ENST00000588831 EXOC6Q8TAG9 804 aa16.16■□□□□ 0.18
LRFN3-204ENST00000588831 HFM1A2PYH4 1435 aa16.16■□□□□ 0.18
LRFN3-204ENST00000588831 MYOM3Q5VTT5 1437 aa16.16■□□□□ 0.18
LRFN3-204ENST00000588831 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
LRFN3-204ENST00000588831 CNTLNQ9NXG0 1405 aa16.14■□□□□ 0.18
LRFN3-204ENST00000588831 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.18
LRFN3-204ENST00000588831 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
LRFN3-204ENST00000588831 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
LRFN3-204ENST00000588831 ST20-MTHFSA0A0A6YYL1 179 aa16.12■□□□□ 0.17
LRFN3-204ENST00000588831 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
LRFN3-204ENST00000588831 NUDCQ9Y266 331 aa16.12■□□□□ 0.17
LRFN3-204ENST00000588831 PPM1GO15355 546 aaPredicted RBP16.11■□□□□ 0.17
LRFN3-204ENST00000588831 FYCO1Q9BQS8 1478 aa16.1■□□□□ 0.17
LRFN3-204ENST00000588831 PTPN23Q9H3S7 1636 aa16.09■□□□□ 0.17
LRFN3-204ENST00000588831 PLEKHD1A6NEE1 506 aa16.09■□□□□ 0.17
LRFN3-204ENST00000588831 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.17
LRFN3-204ENST00000588831 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
LRFN3-204ENST00000588831 DNMBPQ6XZF7 1577 aa16.08■□□□□ 0.16
LRFN3-204ENST00000588831 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
LRFN3-204ENST00000588831 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
LRFN3-204ENST00000588831 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
LRFN3-204ENST00000588831 GSE1Q14687 1217 aa16.07■□□□□ 0.16
LRFN3-204ENST00000588831 PDE4CQ08493 712 aa16.07■□□□□ 0.16
LRFN3-204ENST00000588831 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
LRFN3-204ENST00000588831 KDM6BO15054 1643 aa16.04■□□□□ 0.16
LRFN3-204ENST00000588831 USP47Q96K76 1375 aa16.04■□□□□ 0.16
LRFN3-204ENST00000588831 RGS3P49796 1198 aa16.03■□□□□ 0.16
LRFN3-204ENST00000588831 JPH4Q96JJ6 628 aa16.01■□□□□ 0.15
LRFN3-204ENST00000588831 RCAN3Q9UKA8 241 aa16.01■□□□□ 0.15
LRFN3-204ENST00000588831 MAP3K1Q13233 1512 aa16.01■□□□□ 0.15
LRFN3-204ENST00000588831 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
LRFN3-204ENST00000588831 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
LRFN3-204ENST00000588831 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
LRFN3-204ENST00000588831 RBM10P98175 930 aaKnown RBP15.98■□□□□ 0.15
LRFN3-204ENST00000588831 NUP155O75694 1391 aa15.98■□□□□ 0.15
LRFN3-204ENST00000588831 CFAP43Q8NDM7 1665 aa15.97■□□□□ 0.15
LRFN3-204ENST00000588831 PDE4AP27815 886 aa15.97■□□□□ 0.15
LRFN3-204ENST00000588831 NCOA1Q15788 1441 aa15.96■□□□□ 0.15
LRFN3-204ENST00000588831 NBPF1Q3BBV0 1214 aa15.96■□□□□ 0.15
LRFN3-204ENST00000588831 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.15
LRFN3-204ENST00000588831 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
LRFN3-204ENST00000588831 RRP1P56182 461 aaKnown RBP15.95■□□□□ 0.14
LRFN3-204ENST00000588831 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
LRFN3-204ENST00000588831 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
LRFN3-204ENST00000588831 DENND4BO75064 1496 aaPredicted RBP15.93■□□□□ 0.14
LRFN3-204ENST00000588831 AEBP2Q6ZN18 517 aaPredicted RBP15.93■□□□□ 0.14
LRFN3-204ENST00000588831 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
LRFN3-204ENST00000588831 NEUROD2Q15784 382 aa15.92■□□□□ 0.14
LRFN3-204ENST00000588831 CCDC146Q8IYE0 955 aa15.92■□□□□ 0.14
LRFN3-204ENST00000588831 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
LRFN3-204ENST00000588831 GZF1Q9H116 711 aaPredicted RBP15.92■□□□□ 0.14
LRFN3-204ENST00000588831 EFCAB5A4FU69 1503 aa15.91■□□□□ 0.14
LRFN3-204ENST00000588831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.91■□□□□ 0.14
LRFN3-204ENST00000588831 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
LRFN3-204ENST00000588831 PRDM2Q13029 1718 aa15.9■□□□□ 0.14
LRFN3-204ENST00000588831 TNNT2P45379 298 aaPredicted RBP15.9■□□□□ 0.14
LRFN3-204ENST00000588831 KDM5BQ9UGL1 1544 aa15.9■□□□□ 0.14
LRFN3-204ENST00000588831 SUPT6HQ7KZ85 1726 aaKnown RBP15.89■□□□□ 0.13
LRFN3-204ENST00000588831 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
LRFN3-204ENST00000588831 ROCK2O75116 1388 aaKnown RBP15.88■□□□□ 0.13
LRFN3-204ENST00000588831 THOC2Q8NI27 1593 aaKnown RBP15.88■□□□□ 0.13
LRFN3-204ENST00000588831 LAMC3Q9Y6N6 1575 aa15.87■□□□□ 0.13
LRFN3-204ENST00000588831 PANK3Q9H999 370 aa15.87■□□□□ 0.13
LRFN3-204ENST00000588831 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
LRFN3-204ENST00000588831 EPRSP07814 1512 aaKnown RBP15.87■□□□□ 0.13
LRFN3-204ENST00000588831 GRIN2BQ13224 1484 aa15.86■□□□□ 0.13
LRFN3-204ENST00000588831 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
LRFN3-204ENST00000588831 ZBTB7CA1YPR0 619 aa15.86■□□□□ 0.13
LRFN3-204ENST00000588831 ABCC5O15440 1437 aa15.85■□□□□ 0.13
LRFN3-204ENST00000588831 DAPK1P53355 1430 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms