RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 URB2Q14146 1524 aaKnown RBP14.32□□□□□ -0.12
TOP3A-214ENST00000582981 EFCAB5A4FU69 1503 aa14.32□□□□□ -0.12
TOP3A-214ENST00000582981 LRRIQ1Q96JM4 1722 aa14.32□□□□□ -0.12
TOP3A-214ENST00000582981 DENND4BO75064 1496 aaPredicted RBP14.31□□□□□ -0.12
TOP3A-214ENST00000582981 UBE2Q2Q8WVN8 375 aa14.31□□□□□ -0.12
TOP3A-214ENST00000582981 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
TOP3A-214ENST00000582981 PDS5BQ9NTI5 1447 aa14.3□□□□□ -0.12
TOP3A-214ENST00000582981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.12
TOP3A-214ENST00000582981 PPP4R2Q9NY27 417 aa14.28□□□□□ -0.12
TOP3A-214ENST00000582981 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
TOP3A-214ENST00000582981 KIF7Q2M1P5 1343 aa14.27□□□□□ -0.12
TOP3A-214ENST00000582981 CTTNBP2Q8WZ74 1663 aa14.27□□□□□ -0.12
TOP3A-214ENST00000582981 CCDC7Q96M83 1385 aa14.27□□□□□ -0.12
TOP3A-214ENST00000582981 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
TOP3A-214ENST00000582981 ANP32AP39687 249 aaKnown RBP14.25□□□□□ -0.13
TOP3A-214ENST00000582981 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
TOP3A-214ENST00000582981 AKNAQ7Z591 1439 aa14.24□□□□□ -0.13
TOP3A-214ENST00000582981 KDM2AQ9Y2K7 1162 aa14.24□□□□□ -0.13
TOP3A-214ENST00000582981 SUPT6HQ7KZ85 1726 aaKnown RBP14.23□□□□□ -0.13
TOP3A-214ENST00000582981 FBLN2P98095 1184 aa14.22□□□□□ -0.13
TOP3A-214ENST00000582981 CUL7Q14999 1698 aa14.21□□□□□ -0.13
TOP3A-214ENST00000582981 UGGT2Q9NYU1 1516 aa14.21□□□□□ -0.13
TOP3A-214ENST00000582981 LAMC3Q9Y6N6 1575 aa14.21□□□□□ -0.14
TOP3A-214ENST00000582981 EHBP1L1Q8N3D4 1523 aa14.21□□□□□ -0.14
TOP3A-214ENST00000582981 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
TOP3A-214ENST00000582981 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
TOP3A-214ENST00000582981 EPRSP07814 1512 aaKnown RBP14.18□□□□□ -0.14
TOP3A-214ENST00000582981 LAS1LQ9Y4W2 734 aaKnown RBP14.18□□□□□ -0.14
TOP3A-214ENST00000582981 IPO9Q96P70 1041 aaKnown RBP14.18□□□□□ -0.14
TOP3A-214ENST00000582981 SAMD9Q5K651 1589 aa14.17□□□□□ -0.14
TOP3A-214ENST00000582981 NCOA1Q15788 1441 aa14.17□□□□□ -0.14
TOP3A-214ENST00000582981 ZBED9Q6R2W3 1325 aa14.16□□□□□ -0.14
TOP3A-214ENST00000582981 PKD2Q13563 968 aa14.16□□□□□ -0.14
TOP3A-214ENST00000582981 ANKRD30BQ9BXX2 1392 aa14.16□□□□□ -0.14
TOP3A-214ENST00000582981 NEFMP07197 916 aa14.15□□□□□ -0.14
TOP3A-214ENST00000582981 CFDP1Q9UEE9 299 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-214ENST00000582981 TMC1Q8TDI8 760 aa14.12□□□□□ -0.15
TOP3A-214ENST00000582981 ABCC5O15440 1437 aa14.12□□□□□ -0.15
TOP3A-214ENST00000582981 SKAP1Q86WV1 359 aa14.12□□□□□ -0.15
TOP3A-214ENST00000582981 BRPF3Q9ULD4 1205 aa14.12□□□□□ -0.15
TOP3A-214ENST00000582981 DAPK1P53355 1430 aa14.12□□□□□ -0.15
TOP3A-214ENST00000582981 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
TOP3A-214ENST00000582981 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
TOP3A-214ENST00000582981 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
TOP3A-214ENST00000582981 USP47Q96K76 1375 aa14.11□□□□□ -0.15
TOP3A-214ENST00000582981 CARD11Q9BXL7 1154 aa14.09□□□□□ -0.15
TOP3A-214ENST00000582981 RGL3Q3MIN7 710 aa14.09□□□□□ -0.15
TOP3A-214ENST00000582981 ARHGEF11O15085 1522 aa14.09□□□□□ -0.15
TOP3A-214ENST00000582981 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
TOP3A-214ENST00000582981 TEX14Q8IWB6 1497 aa14.09□□□□□ -0.15
TOP3A-214ENST00000582981 HECW1Q76N89 1606 aa14.08□□□□□ -0.16
TOP3A-214ENST00000582981 TCOF1Q13428 1488 aaKnown RBP14.08□□□□□ -0.16
TOP3A-214ENST00000582981 ST20-MTHFSA0A0A6YYL1 179 aa14.08□□□□□ -0.16
TOP3A-214ENST00000582981 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
TOP3A-214ENST00000582981 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
TOP3A-214ENST00000582981 NUDCQ9Y266 331 aa14.07□□□□□ -0.16
TOP3A-214ENST00000582981 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
TOP3A-214ENST00000582981 IQGAP2Q13576 1575 aa14.06□□□□□ -0.16
TOP3A-214ENST00000582981 GCC2Q8IWJ2 1684 aa14.05□□□□□ -0.16
TOP3A-214ENST00000582981 DHX29Q7Z478 1369 aaKnown RBP14.05□□□□□ -0.16
TOP3A-214ENST00000582981 SPATA31E1Q6ZUB1 1445 aa14.05□□□□□ -0.16
TOP3A-214ENST00000582981 PKNOX2Q96KN3 472 aa14.05□□□□□ -0.16
TOP3A-214ENST00000582981 EXOC6Q8TAG9 804 aa14.03□□□□□ -0.16
TOP3A-214ENST00000582981 MIA2Q96PC5 1412 aa14.03□□□□□ -0.16
TOP3A-214ENST00000582981 PLIN1O60240 522 aa14.03□□□□□ -0.16
TOP3A-214ENST00000582981 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.166e-6■□□□□ 8.3
TOP3A-214ENST00000582981 WDR62O43379 1518 aa14.02□□□□□ -0.16
TOP3A-214ENST00000582981 NUP155O75694 1391 aa14.02□□□□□ -0.16
TOP3A-214ENST00000582981 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.16
TOP3A-214ENST00000582981 PNISRQ8TF01 805 aaKnown RBP14.02□□□□□ -0.17
TOP3A-214ENST00000582981 HNRNPMP52272 730 aaKnown RBP eCLIP14.02□□□□□ -0.17
TOP3A-214ENST00000582981 CC2D1BQ5T0F9 858 aaKnown RBP14.02□□□□□ -0.17
TOP3A-214ENST00000582981 PLB1Q6P1J6 1458 aa14.01□□□□□ -0.17
TOP3A-214ENST00000582981 PZPP20742 1482 aa14.01□□□□□ -0.17
TOP3A-214ENST00000582981 NUP153P49790 1475 aaKnown RBP14.01□□□□□ -0.17
TOP3A-214ENST00000582981 CDCA7LQ96GN5 454 aa14.01□□□□□ -0.17
TOP3A-214ENST00000582981 CHMP7Q8WUX9 453 aaPredicted RBP14□□□□□ -0.17
TOP3A-214ENST00000582981 BCORL1Q5H9F3 1711 aa14□□□□□ -0.17
TOP3A-214ENST00000582981 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
TOP3A-214ENST00000582981 NBPF1Q3BBV0 1214 aa13.98□□□□□ -0.17
TOP3A-214ENST00000582981 CAMSAP2Q08AD1 1489 aa13.97□□□□□ -0.17
TOP3A-214ENST00000582981 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
TOP3A-214ENST00000582981 ROCK1Q13464 1354 aa13.95□□□□□ -0.18
TOP3A-214ENST00000582981 DISP1Q96F81 1524 aa13.95□□□□□ -0.18
TOP3A-214ENST00000582981 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
TOP3A-214ENST00000582981 ANKRD50Q9ULJ7 1429 aa13.94□□□□□ -0.18
TOP3A-214ENST00000582981 ADAMTS12P58397 1594 aa13.93□□□□□ -0.18
TOP3A-214ENST00000582981 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
TOP3A-214ENST00000582981 USP35Q9P2H5 1018 aa13.93□□□□□ -0.18
TOP3A-214ENST00000582981 DNMT1P26358 1616 aaKnown RBP13.93□□□□□ -0.18
TOP3A-214ENST00000582981 KIF14Q15058 1648 aa13.92□□□□□ -0.18
TOP3A-214ENST00000582981 TSPY4P0CV99 314 aa13.92□□□□□ -0.18
TOP3A-214ENST00000582981 TSPY10P0CW01 314 aa13.92□□□□□ -0.18
TOP3A-214ENST00000582981 GSE1Q14687 1217 aa13.92□□□□□ -0.18
TOP3A-214ENST00000582981 RRP1P56182 461 aaKnown RBP13.92□□□□□ -0.18
TOP3A-214ENST00000582981 RCAN3Q9UKA8 241 aa13.92□□□□□ -0.18
TOP3A-214ENST00000582981 ROCK2O75116 1388 aaKnown RBP13.92□□□□□ -0.18
TOP3A-214ENST00000582981 WASHC2CQ9Y4E1 1318 aa13.91□□□□□ -0.18
TOP3A-214ENST00000582981 GPATCH8Q9UKJ3 1502 aaKnown RBP13.91□□□□□ -0.18
TOP3A-214ENST00000582981 ANKRD30AQ9BXX3 1397 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms