RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 IER5LQ5T953 404 aa14.13□□□□□ -0.15
SENP3-203ENST00000580231 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
SENP3-203ENST00000580231 SEC24BO95487 1268 aa14.11□□□□□ -0.15
SENP3-203ENST00000580231 GSE1Q14687 1217 aa14.11□□□□□ -0.15
SENP3-203ENST00000580231 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
SENP3-203ENST00000580231 RAPGEF2Q9Y4G8 1499 aa14.11□□□□□ -0.15
SENP3-203ENST00000580231 SCUBE2Q9NQ36 999 aa14.1□□□□□ -0.15
SENP3-203ENST00000580231 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
SENP3-203ENST00000580231 PCDHB8Q9UN66 801 aa14.07□□□□□ -0.16
SENP3-203ENST00000580231 CLIP1P30622 1438 aa14.07□□□□□ -0.16
SENP3-203ENST00000580231 HRCP23327 699 aa14.06□□□□□ -0.16
SENP3-203ENST00000580231 IGF1RP08069 1367 aa14.06□□□□□ -0.16
SENP3-203ENST00000580231 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
SENP3-203ENST00000580231 ABCA10Q8WWZ4 1543 aa14.03□□□□□ -0.16
SENP3-203ENST00000580231 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
SENP3-203ENST00000580231 CHRM1P11229 460 aaPredicted RBP14.01□□□□□ -0.17
SENP3-203ENST00000580231 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
SENP3-203ENST00000580231 CARMIL1Q5VZK9 1371 aa13.99□□□□□ -0.17
SENP3-203ENST00000580231 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
SENP3-203ENST00000580231 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
SENP3-203ENST00000580231 IRX5P78411 483 aaPredicted RBP13.98□□□□□ -0.17
SENP3-203ENST00000580231 ZNF467Q7Z7K2 595 aaPredicted RBP13.98□□□□□ -0.17
SENP3-203ENST00000580231 PLCG2P16885 1265 aa13.96□□□□□ -0.17
SENP3-203ENST00000580231 RAD54L2Q9Y4B4 1467 aa13.94□□□□□ -0.18
SENP3-203ENST00000580231 POTEMA6NI47 508 aa13.94□□□□□ -0.18
SENP3-203ENST00000580231 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
SENP3-203ENST00000580231 POTEGQ6S5H5 508 aa13.91□□□□□ -0.18
SENP3-203ENST00000580231 CUL7Q14999 1698 aa13.91□□□□□ -0.18
SENP3-203ENST00000580231 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
SENP3-203ENST00000580231 LCE2DQ5TA82 110 aaPredicted RBP13.9□□□□□ -0.18
SENP3-203ENST00000580231 OCEL1Q9H607 264 aa13.9□□□□□ -0.18
SENP3-203ENST00000580231 CIZ1Q9ULV3 898 aaPredicted RBP13.9□□□□□ -0.18
SENP3-203ENST00000580231 PPARGC1BQ86YN6 1023 aaKnown RBP13.89□□□□□ -0.19
SENP3-203ENST00000580231 FAM163AQ96GL9 167 aaPredicted RBP13.88□□□□□ -0.19
SENP3-203ENST00000580231 PSEN1P49768 467 aa13.86□□□□□ -0.19
SENP3-203ENST00000580231 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
SENP3-203ENST00000580231 ABCA5Q8WWZ7 1642 aa13.85□□□□□ -0.19
SENP3-203ENST00000580231 GAPVD1Q14C86 1478 aa13.85□□□□□ -0.19
SENP3-203ENST00000580231 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.2
SENP3-203ENST00000580231 ARHGAP35Q9NRY4 1499 aa13.83□□□□□ -0.2
SENP3-203ENST00000580231 ZNF608Q9ULD9 1512 aaPredicted RBP13.82□□□□□ -0.2
SENP3-203ENST00000580231 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
SENP3-203ENST00000580231 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
SENP3-203ENST00000580231 TDRD9Q8NDG6 1382 aaKnown RBP13.82□□□□□ -0.2
SENP3-203ENST00000580231 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
SENP3-203ENST00000580231 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
SENP3-203ENST00000580231 MKRN3Q13064 507 aaKnown RBP13.8□□□□□ -0.2
SENP3-203ENST00000580231 PDAP1Q13442 181 aaKnown RBP13.8□□□□□ -0.2
SENP3-203ENST00000580231 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
SENP3-203ENST00000580231 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
SENP3-203ENST00000580231 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
SENP3-203ENST00000580231 EFCAB5A4FU69 1503 aa13.76□□□□□ -0.21
SENP3-203ENST00000580231 MAP3K1Q13233 1512 aa13.76□□□□□ -0.21
SENP3-203ENST00000580231 FHAD1B1AJZ9 1412 aa13.76□□□□□ -0.21
SENP3-203ENST00000580231 CTTNBP2Q8WZ74 1663 aa13.74□□□□□ -0.21
SENP3-203ENST00000580231 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
SENP3-203ENST00000580231 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
SENP3-203ENST00000580231 PCDH10Q9P2E7 1040 aa13.72□□□□□ -0.21
SENP3-203ENST00000580231 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.71□□□□□ -0.21
SENP3-203ENST00000580231 TTBK1Q5TCY1 1321 aaPredicted RBP13.7□□□□□ -0.22
SENP3-203ENST00000580231 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
SENP3-203ENST00000580231 AQRO60306 1485 aaKnown RBP eCLIP13.69□□□□□ -0.226e-6■■■■□ 25.1
SENP3-203ENST00000580231 ILDR1Q86SU0 546 aaPredicted RBP13.69□□□□□ -0.22
SENP3-203ENST00000580231 CABP2Q9NPB3 220 aa13.69□□□□□ -0.22
SENP3-203ENST00000580231 CHD1O14646 1710 aa13.69□□□□□ -0.22
SENP3-203ENST00000580231 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
SENP3-203ENST00000580231 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
SENP3-203ENST00000580231 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
SENP3-203ENST00000580231 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
SENP3-203ENST00000580231 FMN1Q68DA7 1419 aa13.66□□□□□ -0.22
SENP3-203ENST00000580231 ST18O60284 1047 aa13.65□□□□□ -0.22
SENP3-203ENST00000580231 KANK4Q5T7N3 995 aaPredicted RBP13.65□□□□□ -0.22
SENP3-203ENST00000580231 ADAMTS12P58397 1594 aa13.65□□□□□ -0.22
SENP3-203ENST00000580231 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
SENP3-203ENST00000580231 TIAM1Q13009 1591 aa13.63□□□□□ -0.23
SENP3-203ENST00000580231 SAMD9Q5K651 1589 aa13.63□□□□□ -0.23
SENP3-203ENST00000580231 FYCO1Q9BQS8 1478 aa13.63□□□□□ -0.23
SENP3-203ENST00000580231 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
SENP3-203ENST00000580231 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
SENP3-203ENST00000580231 C3orf67Q6ZVT6 689 aa13.62□□□□□ -0.23
SENP3-203ENST00000580231 RRBP1Q9P2E9 1410 aaKnown RBP13.62□□□□□ -0.23
SENP3-203ENST00000580231 FHOD3Q2V2M9 1422 aa13.61□□□□□ -0.23
SENP3-203ENST00000580231 DPY19L2Q6NUT2 758 aa13.6□□□□□ -0.23
SENP3-203ENST00000580231 P3H3Q8IVL6 736 aa13.6□□□□□ -0.23
SENP3-203ENST00000580231 LRRC9Q6ZRR7 1453 aa13.59□□□□□ -0.23
SENP3-203ENST00000580231 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
SENP3-203ENST00000580231 SNPHO15079 494 aa13.58□□□□□ -0.24
SENP3-203ENST00000580231 CFAP43Q8NDM7 1665 aa13.57□□□□□ -0.24
SENP3-203ENST00000580231 PCF11O94913 1555 aaKnown RBP13.57□□□□□ -0.24
SENP3-203ENST00000580231 IQGAP2Q13576 1575 aa13.57□□□□□ -0.24
SENP3-203ENST00000580231 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
SENP3-203ENST00000580231 KIAA0586Q9BVV6 1533 aa13.56□□□□□ -0.24
SENP3-203ENST00000580231 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
SENP3-203ENST00000580231 CCNB3Q8WWL7 1395 aa13.55□□□□□ -0.24
SENP3-203ENST00000580231 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
SENP3-203ENST00000580231 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
SENP3-203ENST00000580231 EFCAB3Q8N7B9 438 aa13.54□□□□□ -0.24
SENP3-203ENST00000580231 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
SENP3-203ENST00000580231 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
SENP3-203ENST00000580231 TMEM121BQ9BXQ6 578 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms