RNA–Protein interactions for RNA: ENST00000574031.1

NOVA1-213, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 2 BASIC

Gene NOVA1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-213ENST00000574031 MARVELD3Q96A59 401 aa11.99□□□□□ -0.49
NOVA1-213ENST00000574031 C3orf67Q6ZVT6 689 aa11.98□□□□□ -0.49
NOVA1-213ENST00000574031 ZNF467Q7Z7K2 595 aaPredicted RBP11.98□□□□□ -0.49
NOVA1-213ENST00000574031 IFT140Q96RY7 1462 aa11.98□□□□□ -0.49
NOVA1-213ENST00000574031 GOLGA2Q08379 1002 aa11.97□□□□□ -0.49
NOVA1-213ENST00000574031 PDCD7Q8N8D1 485 aaKnown RBP11.97□□□□□ -0.49
NOVA1-213ENST00000574031 MKRN3Q13064 507 aaKnown RBP11.96□□□□□ -0.49
NOVA1-213ENST00000574031 GSE1Q14687 1217 aa11.96□□□□□ -0.49
NOVA1-213ENST00000574031 ZNF608Q9ULD9 1512 aaPredicted RBP11.96□□□□□ -0.49
NOVA1-213ENST00000574031 RSF1Q96T23 1441 aaPredicted RBP11.96□□□□□ -0.49
NOVA1-213ENST00000574031 EMP3P54852 163 aa11.92□□□□□ -0.5
NOVA1-213ENST00000574031 CHRM1P11229 460 aaPredicted RBP11.91□□□□□ -0.5
NOVA1-213ENST00000574031 WIZO95785 1651 aa11.9□□□□□ -0.5
NOVA1-213ENST00000574031 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.51
NOVA1-213ENST00000574031 EIF4G3O43432 1585 aaKnown RBP11.86□□□□□ -0.51
NOVA1-213ENST00000574031 KLHL34Q8N239 644 aa11.86□□□□□ -0.51
NOVA1-213ENST00000574031 CHD1O14646 1710 aa11.86□□□□□ -0.51
NOVA1-213ENST00000574031 PSEN1P49768 467 aa11.85□□□□□ -0.51
NOVA1-213ENST00000574031 HS3ST6Q96QI5 342 aa11.85□□□□□ -0.51
NOVA1-213ENST00000574031 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
NOVA1-213ENST00000574031 FAM205CA6NFA0 338 aa11.82□□□□□ -0.52
NOVA1-213ENST00000574031 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
NOVA1-213ENST00000574031 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
NOVA1-213ENST00000574031 KRTAP3-3Q9BYR6 98 aa11.81□□□□□ -0.52
NOVA1-213ENST00000574031 KRTAP3-2Q9BYR7 98 aa11.81□□□□□ -0.52
NOVA1-213ENST00000574031 AQRO60306 1485 aaKnown RBP eCLIP11.79□□□□□ -0.52
NOVA1-213ENST00000574031 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
NOVA1-213ENST00000574031 PRDM2Q13029 1718 aa11.79□□□□□ -0.52
NOVA1-213ENST00000574031 POTEB3A0JP26 581 aa11.78□□□□□ -0.52
NOVA1-213ENST00000574031 POTEBQ6S5H4 581 aa11.78□□□□□ -0.52
NOVA1-213ENST00000574031 PDAP1Q13442 181 aaKnown RBP11.77□□□□□ -0.52
NOVA1-213ENST00000574031 G3V3G9 751 aa11.77□□□□□ -0.53
NOVA1-213ENST00000574031 TOP2AP11388 1531 aaKnown RBP11.75□□□□□ -0.53
NOVA1-213ENST00000574031 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
NOVA1-213ENST00000574031 TARBP1Q13395 1621 aaKnown RBP11.74□□□□□ -0.53
NOVA1-213ENST00000574031 DNMBPQ6XZF7 1577 aa11.73□□□□□ -0.53
NOVA1-213ENST00000574031 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
NOVA1-213ENST00000574031 SYNJ1O43426 1573 aa11.72□□□□□ -0.53
NOVA1-213ENST00000574031 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
NOVA1-213ENST00000574031 CHMP7Q8WUX9 453 aaPredicted RBP11.7□□□□□ -0.54
NOVA1-213ENST00000574031 HOXB3P14651 431 aaPredicted RBP11.69□□□□□ -0.54
NOVA1-213ENST00000574031 GAPVD1Q14C86 1478 aa11.69□□□□□ -0.54
NOVA1-213ENST00000574031 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
NOVA1-213ENST00000574031 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
NOVA1-213ENST00000574031 HOXB1P14653 301 aaPredicted RBP11.68□□□□□ -0.54
NOVA1-213ENST00000574031 DOK7Q18PE1 504 aa11.67□□□□□ -0.54
NOVA1-213ENST00000574031 POLA1P09884 1462 aaPredicted RBP11.66□□□□□ -0.54
NOVA1-213ENST00000574031 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
NOVA1-213ENST00000574031 TDRD9Q8NDG6 1382 aaKnown RBP11.65□□□□□ -0.54
NOVA1-213ENST00000574031 MAGI1Q96QZ7 1491 aaPredicted RBP11.65□□□□□ -0.54
NOVA1-213ENST00000574031 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
NOVA1-213ENST00000574031 ERBB3P21860 1342 aa11.63□□□□□ -0.55
NOVA1-213ENST00000574031 CCDC88BA6NC98 1476 aa11.62□□□□□ -0.55
NOVA1-213ENST00000574031 SPOCK2Q92563 424 aa11.62□□□□□ -0.55
NOVA1-213ENST00000574031 SOGA1O94964 1423 aa11.62□□□□□ -0.55
NOVA1-213ENST00000574031 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
NOVA1-213ENST00000574031 RAD54L2Q9Y4B4 1467 aa11.61□□□□□ -0.55
NOVA1-213ENST00000574031 RIMBP2O15034 1052 aa11.6□□□□□ -0.55
NOVA1-213ENST00000574031 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
NOVA1-213ENST00000574031 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
NOVA1-213ENST00000574031 KDM4FA0A1W2PPD8 638 aa11.55□□□□□ -0.56
NOVA1-213ENST00000574031 RNF166Q96A37 237 aaPredicted RBP11.55□□□□□ -0.56
NOVA1-213ENST00000574031 ZSWIM6Q9HCJ5 1215 aa11.54□□□□□ -0.56
NOVA1-213ENST00000574031 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
NOVA1-213ENST00000574031 IFNLR1Q8IU57 520 aaPredicted RBP11.52□□□□□ -0.57
NOVA1-213ENST00000574031 KIF13AQ9H1H9 1805 aa11.51□□□□□ -0.57
NOVA1-213ENST00000574031 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
NOVA1-213ENST00000574031 EFCAB3Q8N7B9 438 aa11.5□□□□□ -0.57
NOVA1-213ENST00000574031 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
NOVA1-213ENST00000574031 ZNF687Q8N1G0 1237 aa11.49□□□□□ -0.57
NOVA1-213ENST00000574031 ERCC6L2Q5T890 1561 aa11.48□□□□□ -0.57
NOVA1-213ENST00000574031 PTGER2P43116 358 aa11.47□□□□□ -0.57
NOVA1-213ENST00000574031 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
NOVA1-213ENST00000574031 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
NOVA1-213ENST00000574031 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
NOVA1-213ENST00000574031 ABCC10Q5T3U5 1492 aa11.45□□□□□ -0.58
NOVA1-213ENST00000574031 PBRM1Q86U86 1689 aa11.44□□□□□ -0.58
NOVA1-213ENST00000574031 SOX12O15370 315 aa11.43□□□□□ -0.58
NOVA1-213ENST00000574031 KDM6BO15054 1643 aa11.43□□□□□ -0.58
NOVA1-213ENST00000574031 GPR153Q6NV75 609 aa11.43□□□□□ -0.58
NOVA1-213ENST00000574031 GRIN2AQ12879 1464 aa11.42□□□□□ -0.58
NOVA1-213ENST00000574031 TMEM92Q6UXU6 159 aa11.42□□□□□ -0.58
NOVA1-213ENST00000574031 NUP160Q12769 1436 aa11.42□□□□□ -0.58
NOVA1-213ENST00000574031 SHROOM2Q13796 1616 aa11.4□□□□□ -0.58
NOVA1-213ENST00000574031 MAPKBP1O60336 1514 aa11.39□□□□□ -0.59
NOVA1-213ENST00000574031 CUX1P39880 1505 aa11.39□□□□□ -0.59
NOVA1-213ENST00000574031 ABCA5Q8WWZ7 1642 aa11.37□□□□□ -0.59
NOVA1-213ENST00000574031 DIP2BQ9P265 1576 aa11.37□□□□□ -0.59
NOVA1-213ENST00000574031 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
NOVA1-213ENST00000574031 FBXO41Q8TF61 875 aa11.35□□□□□ -0.59
NOVA1-213ENST00000574031 PRG4Q92954 1404 aaPredicted RBP11.34□□□□□ -0.59
NOVA1-213ENST00000574031 HECW2Q9P2P5 1572 aa11.34□□□□□ -0.59
NOVA1-213ENST00000574031 ADGRL1O94910 1474 aa11.34□□□□□ -0.59
NOVA1-213ENST00000574031 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
NOVA1-213ENST00000574031 ADAMTS12P58397 1594 aa11.32□□□□□ -0.6
NOVA1-213ENST00000574031 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
NOVA1-213ENST00000574031 ARSIQ5FYB1 569 aa11.32□□□□□ -0.6
NOVA1-213ENST00000574031 FHAD1B1AJZ9 1412 aa11.31□□□□□ -0.6
NOVA1-213ENST00000574031 ANKRD13DQ6ZTN6 518 aa11.31□□□□□ -0.6
NOVA1-213ENST00000574031 JPH4Q96JJ6 628 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms