RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 SEMA3EO15041 775 aa15.81■□□□□ 0.12
UBFD1-205ENST00000566136 P3H3Q8IVL6 736 aa15.8■□□□□ 0.12
UBFD1-205ENST00000566136 SOGA1O94964 1423 aa15.8■□□□□ 0.12
UBFD1-205ENST00000566136 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
UBFD1-205ENST00000566136 CUX1P39880 1505 aa15.79■□□□□ 0.12
UBFD1-205ENST00000566136 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
UBFD1-205ENST00000566136 TDRD9Q8NDG6 1382 aaKnown RBP15.78■□□□□ 0.12
UBFD1-205ENST00000566136 HOXD11P31277 338 aaPredicted RBP15.76■□□□□ 0.11
UBFD1-205ENST00000566136 IRF5Q13568 498 aa15.75■□□□□ 0.11
UBFD1-205ENST00000566136 PDE4CQ08493 712 aa15.74■□□□□ 0.11
UBFD1-205ENST00000566136 KDM4CQ9H3R0 1056 aa15.74■□□□□ 0.11
UBFD1-205ENST00000566136 ZMYND10O75800 440 aa15.73■□□□□ 0.11
UBFD1-205ENST00000566136 CHD1O14646 1710 aa15.72■□□□□ 0.11
UBFD1-205ENST00000566136 IRX6P78412 446 aaPredicted RBP15.72■□□□□ 0.11
UBFD1-205ENST00000566136 RETREG2Q8NC44 543 aa15.72■□□□□ 0.11
UBFD1-205ENST00000566136 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
UBFD1-205ENST00000566136 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
UBFD1-205ENST00000566136 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
UBFD1-205ENST00000566136 POLA2Q14181 598 aa15.69■□□□□ 0.1
UBFD1-205ENST00000566136 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
UBFD1-205ENST00000566136 CWC22Q9HCG8 908 aaKnown RBP15.69■□□□□ 0.1
UBFD1-205ENST00000566136 ARHGEF11O15085 1522 aa15.68■□□□□ 0.1
UBFD1-205ENST00000566136 SNAPC4Q5SXM2 1469 aa15.67■□□□□ 0.1
UBFD1-205ENST00000566136 E9PSI1 815 aa15.67■□□□□ 0.1
UBFD1-205ENST00000566136 PLCD3Q8N3E9 789 aa15.66■□□□□ 0.1
UBFD1-205ENST00000566136 ZNF777Q9ULD5 760 aaPredicted RBP15.66■□□□□ 0.1
UBFD1-205ENST00000566136 FAM117AQ9C073 453 aa15.63■□□□□ 0.09
UBFD1-205ENST00000566136 WDR97A6NE52 1622 aa15.63■□□□□ 0.09
UBFD1-205ENST00000566136 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
UBFD1-205ENST00000566136 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
UBFD1-205ENST00000566136 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
UBFD1-205ENST00000566136 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
UBFD1-205ENST00000566136 STK25O00506 426 aa15.6■□□□□ 0.09
UBFD1-205ENST00000566136 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
UBFD1-205ENST00000566136 GAPVD1Q14C86 1478 aa15.6■□□□□ 0.09
UBFD1-205ENST00000566136 MAGI1Q96QZ7 1491 aaPredicted RBP15.6■□□□□ 0.09
UBFD1-205ENST00000566136 BRPF3Q9ULD4 1205 aa15.59■□□□□ 0.09
UBFD1-205ENST00000566136 TRAK2O60296 914 aa15.58■□□□□ 0.09
UBFD1-205ENST00000566136 FBXW7Q969H0 707 aa15.58■□□□□ 0.09
UBFD1-205ENST00000566136 ABCA10Q8WWZ4 1543 aa15.58■□□□□ 0.09
UBFD1-205ENST00000566136 ZNF316A6NFI3 1004 aaPredicted RBP15.57■□□□□ 0.08
UBFD1-205ENST00000566136 PBRM1Q86U86 1689 aa15.56■□□□□ 0.08
UBFD1-205ENST00000566136 WRNQ14191 1432 aaPredicted RBP eCLIP15.56■□□□□ 0.08
UBFD1-205ENST00000566136 SYNJ2O15056 1496 aa15.56■□□□□ 0.08
UBFD1-205ENST00000566136 SYNJ1O43426 1573 aa15.55■□□□□ 0.08
UBFD1-205ENST00000566136 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
UBFD1-205ENST00000566136 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
UBFD1-205ENST00000566136 CLASP1Q7Z460 1538 aa15.54■□□□□ 0.08
UBFD1-205ENST00000566136 TOP2BQ02880 1626 aa15.53■□□□□ 0.08
UBFD1-205ENST00000566136 BIVM-ERCC5R4GMW8 1640 aa15.53■□□□□ 0.08
UBFD1-205ENST00000566136 ZFP91Q96JP5 570 aaPredicted RBP15.53■□□□□ 0.08
UBFD1-205ENST00000566136 RUSC2Q8N2Y8 1516 aa15.52■□□□□ 0.08
UBFD1-205ENST00000566136 ONECUT3O60422 494 aaPredicted RBP15.52■□□□□ 0.08
UBFD1-205ENST00000566136 TAF7LQ5H9L4 462 aa15.49■□□□□ 0.07
UBFD1-205ENST00000566136 MIER1Q8N108 512 aa15.46■□□□□ 0.07
UBFD1-205ENST00000566136 TESPA1A2RU30 521 aaPredicted RBP15.45■□□□□ 0.06
UBFD1-205ENST00000566136 TMED8Q6PL24 325 aaPredicted RBP15.45■□□□□ 0.06
UBFD1-205ENST00000566136 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
UBFD1-205ENST00000566136 PLEKHG3A1L390 1219 aa15.44■□□□□ 0.06
UBFD1-205ENST00000566136 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
UBFD1-205ENST00000566136 POM121Q96HA1 1249 aa15.43■□□□□ 0.06
UBFD1-205ENST00000566136 ADAMTS12P58397 1594 aa15.43■□□□□ 0.06
UBFD1-205ENST00000566136 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
UBFD1-205ENST00000566136 CARNS1A5YM72 827 aa15.43■□□□□ 0.06
UBFD1-205ENST00000566136 ZNF592Q92610 1267 aa15.43■□□□□ 0.06
UBFD1-205ENST00000566136 UNCXA6NJT0 531 aa15.42■□□□□ 0.06
UBFD1-205ENST00000566136 BCL11BQ9C0K0 894 aaPredicted RBP15.42■□□□□ 0.06
UBFD1-205ENST00000566136 EEA1Q15075 1411 aa15.42■□□□□ 0.06
UBFD1-205ENST00000566136 CEP162Q5TB80 1403 aa15.41■□□□□ 0.06
UBFD1-205ENST00000566136 CERS3Q8IU89 383 aa15.41■□□□□ 0.06
UBFD1-205ENST00000566136 FHAD1B1AJZ9 1412 aa15.39■□□□□ 0.06
UBFD1-205ENST00000566136 PDE4DQ08499 809 aa15.39■□□□□ 0.05
UBFD1-205ENST00000566136 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
UBFD1-205ENST00000566136 TNIKQ9UKE5 1360 aa15.38■□□□□ 0.05
UBFD1-205ENST00000566136 CEP170Q5SW79 1584 aa15.38■□□□□ 0.05
UBFD1-205ENST00000566136 NUP160Q12769 1436 aa15.37■□□□□ 0.05
UBFD1-205ENST00000566136 AK7Q96M32 723 aa15.36■□□□□ 0.05
UBFD1-205ENST00000566136 BCL11AQ9H165 835 aa15.36■□□□□ 0.05
UBFD1-205ENST00000566136 RSPH4AQ5TD94 716 aa15.35■□□□□ 0.05
UBFD1-205ENST00000566136 ERCC6L2Q5T890 1561 aa15.35■□□□□ 0.05
UBFD1-205ENST00000566136 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
UBFD1-205ENST00000566136 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
UBFD1-205ENST00000566136 KDM4AO75164 1064 aa15.34■□□□□ 0.05
UBFD1-205ENST00000566136 RBM26Q5T8P6 1007 aaKnown RBP15.34■□□□□ 0.05
UBFD1-205ENST00000566136 TRIM66O15016 1216 aa15.32■□□□□ 0.04
UBFD1-205ENST00000566136 SMARCA5O60264 1052 aaPredicted RBP15.32■□□□□ 0.04
UBFD1-205ENST00000566136 STK24Q9Y6E0 443 aa15.32■□□□□ 0.04
UBFD1-205ENST00000566136 KRI1Q8N9T8 703 aaKnown RBP15.31■□□□□ 0.04
UBFD1-205ENST00000566136 RIOK3O14730 519 aaKnown RBP15.29■□□□□ 0.04
UBFD1-205ENST00000566136 FLIIQ13045 1269 aa15.28■□□□□ 0.04
UBFD1-205ENST00000566136 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.04
UBFD1-205ENST00000566136 SHROOM2Q13796 1616 aa15.27■□□□□ 0.04
UBFD1-205ENST00000566136 A6NJR5 290 aa15.27■□□□□ 0.03
UBFD1-205ENST00000566136 ZEB1P37275 1124 aaPredicted RBP15.27■□□□□ 0.03
UBFD1-205ENST00000566136 ARID4BQ4LE39 1312 aaPredicted RBP15.27■□□□□ 0.03
UBFD1-205ENST00000566136 CCDC97Q96F63 343 aaPredicted RBP15.26■□□□□ 0.03
UBFD1-205ENST00000566136 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
UBFD1-205ENST00000566136 IGF1RP08069 1367 aa15.25■□□□□ 0.03
UBFD1-205ENST00000566136 KIF27Q86VH2 1401 aa15.25■□□□□ 0.03
UBFD1-205ENST00000566136 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms