RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 PSEN1P49768 467 aa12.23□□□□□ -0.45
TRPM1-206ENST00000558212 POLA1P09884 1462 aaPredicted RBP12.22□□□□□ -0.45
TRPM1-206ENST00000558212 SYNJ1O43426 1573 aa12.21□□□□□ -0.46
TRPM1-206ENST00000558212 WDR97A6NE52 1622 aa12.2□□□□□ -0.46
TRPM1-206ENST00000558212 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
TRPM1-206ENST00000558212 SNAPC4Q5SXM2 1469 aa12.18□□□□□ -0.46
TRPM1-206ENST00000558212 MFRPQ9BY79 579 aa12.17□□□□□ -0.46
TRPM1-206ENST00000558212 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
TRPM1-206ENST00000558212 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
TRPM1-206ENST00000558212 TDRD9Q8NDG6 1382 aaKnown RBP12.16□□□□□ -0.46
TRPM1-206ENST00000558212 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
TRPM1-206ENST00000558212 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
TRPM1-206ENST00000558212 SOGA1O94964 1423 aa12.14□□□□□ -0.47
TRPM1-206ENST00000558212 C19orf67A6NJJ6 358 aa12.14□□□□□ -0.47
TRPM1-206ENST00000558212 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
TRPM1-206ENST00000558212 PHF12Q96QT6 1004 aa12.12□□□□□ -0.47
TRPM1-206ENST00000558212 SYNJ2O15056 1496 aa12.12□□□□□ -0.47
TRPM1-206ENST00000558212 GRIN2BQ13224 1484 aa12.11□□□□□ -0.47
TRPM1-206ENST00000558212 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
TRPM1-206ENST00000558212 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
TRPM1-206ENST00000558212 SOX12O15370 315 aa12.07□□□□□ -0.48
TRPM1-206ENST00000558212 EFCAB3Q8N7B9 438 aa12.07□□□□□ -0.48
TRPM1-206ENST00000558212 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
TRPM1-206ENST00000558212 CADPS2Q86UW7 1296 aa12.04□□□□□ -0.48
TRPM1-206ENST00000558212 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
TRPM1-206ENST00000558212 NLRP6P59044 892 aa12.02□□□□□ -0.49
TRPM1-206ENST00000558212 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
TRPM1-206ENST00000558212 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
TRPM1-206ENST00000558212 PPP1R37O75864 691 aa12□□□□□ -0.49
TRPM1-206ENST00000558212 TRPC6Q9Y210 931 aa12□□□□□ -0.49
TRPM1-206ENST00000558212 CUX1P39880 1505 aa12□□□□□ -0.49
TRPM1-206ENST00000558212 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
TRPM1-206ENST00000558212 KIF13AQ9H1H9 1805 aa11.97□□□□□ -0.49
TRPM1-206ENST00000558212 MS4A4AQ96JQ5 239 aa11.97□□□□□ -0.49
TRPM1-206ENST00000558212 TMEM106CQ9BVX2 250 aa11.96□□□□□ -0.49
TRPM1-206ENST00000558212 ABCA5Q8WWZ7 1642 aa11.96□□□□□ -0.5
TRPM1-206ENST00000558212 CEP170Q5SW79 1584 aa11.96□□□□□ -0.5
TRPM1-206ENST00000558212 TIE1P35590 1138 aa11.95□□□□□ -0.5
TRPM1-206ENST00000558212 NBR1Q14596 966 aa11.95□□□□□ -0.5
TRPM1-206ENST00000558212 GRIN2AQ12879 1464 aa11.95□□□□□ -0.5
TRPM1-206ENST00000558212 ILDR1Q86SU0 546 aaPredicted RBP11.94□□□□□ -0.5
TRPM1-206ENST00000558212 ABCA10Q8WWZ4 1543 aa11.94□□□□□ -0.5
TRPM1-206ENST00000558212 NUP160Q12769 1436 aa11.94□□□□□ -0.5
TRPM1-206ENST00000558212 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
TRPM1-206ENST00000558212 SHROOM2Q13796 1616 aa11.93□□□□□ -0.5
TRPM1-206ENST00000558212 P3H3Q8IVL6 736 aa11.92□□□□□ -0.5
TRPM1-206ENST00000558212 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
TRPM1-206ENST00000558212 CLCN6P51797 869 aa11.9□□□□□ -0.5
TRPM1-206ENST00000558212 ADAMTS12P58397 1594 aa11.9□□□□□ -0.5
TRPM1-206ENST00000558212 KCNV2Q8TDN2 545 aa11.88□□□□□ -0.51
TRPM1-206ENST00000558212 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
TRPM1-206ENST00000558212 ABCC10Q5T3U5 1492 aa11.88□□□□□ -0.51
TRPM1-206ENST00000558212 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
TRPM1-206ENST00000558212 GALR2O43603 387 aaPredicted RBP11.86□□□□□ -0.51
TRPM1-206ENST00000558212 EVX2Q03828 476 aa11.86□□□□□ -0.51
TRPM1-206ENST00000558212 KDM4FA0A1W2PPD8 638 aa11.85□□□□□ -0.51
TRPM1-206ENST00000558212 GOLGA2Q08379 1002 aa11.85□□□□□ -0.51
TRPM1-206ENST00000558212 FAM69CQ0P6D2 419 aa11.85□□□□□ -0.51
TRPM1-206ENST00000558212 MAPKBP1O60336 1514 aa11.85□□□□□ -0.51
TRPM1-206ENST00000558212 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
TRPM1-206ENST00000558212 NCKAP5LQ9HCH0 1330 aa11.85□□□□□ -0.51
TRPM1-206ENST00000558212 MKRN3Q13064 507 aaKnown RBP11.84□□□□□ -0.51
TRPM1-206ENST00000558212 WDR70Q9NW82 654 aa11.84□□□□□ -0.51
TRPM1-206ENST00000558212 KDM6BO15054 1643 aa11.83□□□□□ -0.52
TRPM1-206ENST00000558212 PRG4Q92954 1404 aaPredicted RBP11.83□□□□□ -0.52
TRPM1-206ENST00000558212 DIP2BQ9P265 1576 aa11.83□□□□□ -0.52
TRPM1-206ENST00000558212 WRNQ14191 1432 aaPredicted RBP eCLIP11.81□□□□□ -0.52
TRPM1-206ENST00000558212 HAX1O00165 279 aa11.81□□□□□ -0.52
TRPM1-206ENST00000558212 MFSD10Q14728 455 aa11.81□□□□□ -0.52
TRPM1-206ENST00000558212 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
TRPM1-206ENST00000558212 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
TRPM1-206ENST00000558212 ERICH3Q5RHP9 1530 aa11.79□□□□□ -0.52
TRPM1-206ENST00000558212 JPH4Q96JJ6 628 aa11.77□□□□□ -0.53
TRPM1-206ENST00000558212 ADCY10Q96PN6 1610 aa11.76□□□□□ -0.53
TRPM1-206ENST00000558212 E2F4Q16254 413 aa11.76□□□□□ -0.53
TRPM1-206ENST00000558212 ARHGEF1Q92888 912 aaKnown RBP11.76□□□□□ -0.53
TRPM1-206ENST00000558212 PDE4AP27815 886 aa11.75□□□□□ -0.53
TRPM1-206ENST00000558212 ASTLQ6HA08 431 aaPredicted RBP11.75□□□□□ -0.53
TRPM1-206ENST00000558212 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRPM1-206ENST00000558212 RUSC2Q8N2Y8 1516 aa11.74□□□□□ -0.53
TRPM1-206ENST00000558212 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
TRPM1-206ENST00000558212 ATN1P54259 1190 aaPredicted RBP11.73□□□□□ -0.53
TRPM1-206ENST00000558212 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
TRPM1-206ENST00000558212 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
TRPM1-206ENST00000558212 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
TRPM1-206ENST00000558212 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
TRPM1-206ENST00000558212 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
TRPM1-206ENST00000558212 LARP6Q9BRS8 491 aaKnown RBP11.71□□□□□ -0.53
TRPM1-206ENST00000558212 IRX5P78411 483 aaPredicted RBP11.7□□□□□ -0.54
TRPM1-206ENST00000558212 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
TRPM1-206ENST00000558212 IER5LQ5T953 404 aa11.7□□□□□ -0.54
TRPM1-206ENST00000558212 ADGRL1O94910 1474 aa11.7□□□□□ -0.54
TRPM1-206ENST00000558212 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
TRPM1-206ENST00000558212 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
TRPM1-206ENST00000558212 HECW2Q9P2P5 1572 aa11.67□□□□□ -0.54
TRPM1-206ENST00000558212 TMEM121BQ9BXQ6 578 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-206ENST00000558212 GPHNQ9NQX3 736 aaPredicted RBP11.66□□□□□ -0.54
TRPM1-206ENST00000558212 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRPM1-206ENST00000558212 MICALL2Q8IY33 904 aa11.65□□□□□ -0.54
TRPM1-206ENST00000558212 GABBR2O75899 941 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms