RNA–Protein interactions for RNA: ENST00000558212.5

TRPM1-206, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-206ENST00000558212 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
TRPM1-206ENST00000558212 CHIC1Q5VXU3 224 aa23.51■■□□□ 1.35
TRPM1-206ENST00000558212 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
TRPM1-206ENST00000558212 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
TRPM1-206ENST00000558212 PLPPR3Q6T4P5 718 aa19.26■□□□□ 0.67
TRPM1-206ENST00000558212 FOXD1Q16676 465 aa18.45■□□□□ 0.54
TRPM1-206ENST00000558212 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
TRPM1-206ENST00000558212 ADRA2BP18089 450 aa18.08■□□□□ 0.48
TRPM1-206ENST00000558212 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
TRPM1-206ENST00000558212 KCNA4P22459 653 aa17.16■□□□□ 0.34
TRPM1-206ENST00000558212 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
TRPM1-206ENST00000558212 MSH5O43196 834 aa16.81■□□□□ 0.28
TRPM1-206ENST00000558212 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
TRPM1-206ENST00000558212 NISCHQ9Y2I1 1504 aa16.57■□□□□ 0.24
TRPM1-206ENST00000558212 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
TRPM1-206ENST00000558212 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
TRPM1-206ENST00000558212 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
TRPM1-206ENST00000558212 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
TRPM1-206ENST00000558212 SLC4A1APQ9BWU0 796 aaKnown RBP16.38■□□□□ 0.21
TRPM1-206ENST00000558212 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
TRPM1-206ENST00000558212 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
TRPM1-206ENST00000558212 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
TRPM1-206ENST00000558212 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
TRPM1-206ENST00000558212 DMRT2Q9Y5R5 561 aa16.01■□□□□ 0.15
TRPM1-206ENST00000558212 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
TRPM1-206ENST00000558212 ZBTB22O15209 634 aa15.85■□□□□ 0.13
TRPM1-206ENST00000558212 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
TRPM1-206ENST00000558212 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
TRPM1-206ENST00000558212 ABCC9O60706 1549 aa15.4■□□□□ 0.06
TRPM1-206ENST00000558212 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
TRPM1-206ENST00000558212 ATXN8OSP0DMR3 200 aa15.12■□□□□ 0.01
TRPM1-206ENST00000558212 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0
TRPM1-206ENST00000558212 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
TRPM1-206ENST00000558212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
TRPM1-206ENST00000558212 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
TRPM1-206ENST00000558212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
TRPM1-206ENST00000558212 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
TRPM1-206ENST00000558212 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
TRPM1-206ENST00000558212 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
TRPM1-206ENST00000558212 APLP2Q06481 763 aa14.54□□□□□ -0.08
TRPM1-206ENST00000558212 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
TRPM1-206ENST00000558212 POTEDQ86YR6 584 aa14.49□□□□□ -0.09
TRPM1-206ENST00000558212 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
TRPM1-206ENST00000558212 ZNF219Q9P2Y4 722 aaPredicted RBP14.46□□□□□ -0.09
TRPM1-206ENST00000558212 FKBP8Q14318 412 aa14.45□□□□□ -0.1
TRPM1-206ENST00000558212 NACADO15069 1562 aa14.34□□□□□ -0.11
TRPM1-206ENST00000558212 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
TRPM1-206ENST00000558212 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
TRPM1-206ENST00000558212 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRPM1-206ENST00000558212 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
TRPM1-206ENST00000558212 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
TRPM1-206ENST00000558212 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
TRPM1-206ENST00000558212 CAPN15O75808 1086 aa14.15□□□□□ -0.14
TRPM1-206ENST00000558212 POLA2Q14181 598 aa14.13□□□□□ -0.15
TRPM1-206ENST00000558212 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
TRPM1-206ENST00000558212 DCAF8L2P0C7V8 631 aa14.08□□□□□ -0.16
TRPM1-206ENST00000558212 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
TRPM1-206ENST00000558212 FBLN2P98095 1184 aa14.04□□□□□ -0.16
TRPM1-206ENST00000558212 AMER1Q5JTC6 1135 aaPredicted RBP14.03□□□□□ -0.16
TRPM1-206ENST00000558212 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
TRPM1-206ENST00000558212 PROM2Q8N271 834 aa14.02□□□□□ -0.17
TRPM1-206ENST00000558212 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
TRPM1-206ENST00000558212 SHROOM4Q9ULL8 1493 aa13.96□□□□□ -0.17
TRPM1-206ENST00000558212 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
TRPM1-206ENST00000558212 CECR2Q9BXF3 1484 aa13.94□□□□□ -0.18
TRPM1-206ENST00000558212 ABCB7O75027 752 aa13.94□□□□□ -0.18
TRPM1-206ENST00000558212 DSG3P32926 999 aa13.93□□□□□ -0.18
TRPM1-206ENST00000558212 CC2D2AQ9P2K1 1620 aa13.91□□□□□ -0.18
TRPM1-206ENST00000558212 DNAJC5Q9H3Z4 198 aa13.9□□□□□ -0.18
TRPM1-206ENST00000558212 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
TRPM1-206ENST00000558212 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
TRPM1-206ENST00000558212 DCAF1Q9Y4B6 1507 aa13.7□□□□□ -0.22
TRPM1-206ENST00000558212 SCRIBQ14160 1630 aa13.66□□□□□ -0.22
TRPM1-206ENST00000558212 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
TRPM1-206ENST00000558212 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
TRPM1-206ENST00000558212 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
TRPM1-206ENST00000558212 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
TRPM1-206ENST00000558212 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
TRPM1-206ENST00000558212 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
TRPM1-206ENST00000558212 OSCARQ8IYS5 282 aa13.64□□□□□ -0.23
TRPM1-206ENST00000558212 SSUH2Q9Y2M2 353 aa13.64□□□□□ -0.23
TRPM1-206ENST00000558212 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
TRPM1-206ENST00000558212 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
TRPM1-206ENST00000558212 CUX2O14529 1486 aa13.5□□□□□ -0.25
TRPM1-206ENST00000558212 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
TRPM1-206ENST00000558212 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
TRPM1-206ENST00000558212 ERCC6Q03468 1493 aa13.36□□□□□ -0.27
TRPM1-206ENST00000558212 PKD2Q13563 968 aa13.28□□□□□ -0.28
TRPM1-206ENST00000558212 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
TRPM1-206ENST00000558212 NCAPD3P42695 1498 aa13.23□□□□□ -0.29
TRPM1-206ENST00000558212 RBM42Q9BTD8 480 aaKnown RBP13.22□□□□□ -0.29
TRPM1-206ENST00000558212 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
TRPM1-206ENST00000558212 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
TRPM1-206ENST00000558212 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
TRPM1-206ENST00000558212 MIER1Q8N108 512 aa13.17□□□□□ -0.3
TRPM1-206ENST00000558212 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
TRPM1-206ENST00000558212 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
TRPM1-206ENST00000558212 NESP48681 1621 aa13.11□□□□□ -0.31
TRPM1-206ENST00000558212 SMARCA2P51531 1590 aa13.1□□□□□ -0.31
TRPM1-206ENST00000558212 THOC2Q8NI27 1593 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms