RNA–Protein interactions for RNA: ENST00000556616.5

PRMT5-223, Transcript of protein arginine methyltransferase 5, human

TSL 4

Gene PRMT5, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRMT5-223	ENST00000556616	RYDEN	Q9NUL5	291 aa	Known RBP	11.65	□□□□□ -0.54
PRMT5-223	ENST00000556616	ERCC6	Q03468	1493 aa		11.63	□□□□□ -0.55
PRMT5-223	ENST00000556616	STK24	Q9Y6E0	443 aa		11.63	□□□□□ -0.55
PRMT5-223	ENST00000556616	REM2	Q8IYK8	340 aa	Predicted RBP	11.62	□□□□□ -0.55
PRMT5-223	ENST00000556616	TDRD9	Q8NDG6	1382 aa	Known RBP	11.62	□□□□□ -0.55
PRMT5-223	ENST00000556616	VPS8	Q8N3P4	1428 aa		11.6	□□□□□ -0.55
PRMT5-223	ENST00000556616	PBRM1	Q86U86	1689 aa		11.6	□□□□□ -0.55
PRMT5-223	ENST00000556616	ARAP1	Q96P48	1450 aa		11.59	□□□□□ -0.55
PRMT5-223	ENST00000556616	PYGB	P11216	843 aa		11.59	□□□□□ -0.55
PRMT5-223	ENST00000556616	GRIN2B	Q13224	1484 aa		11.58	□□□□□ -0.56
PRMT5-223	ENST00000556616	ADAMTS12	P58397	1594 aa		11.58	□□□□□ -0.56
PRMT5-223	ENST00000556616	ARHGAP35	Q9NRY4	1499 aa		11.57	□□□□□ -0.56
PRMT5-223	ENST00000556616	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.56	□□□□□ -0.56
PRMT5-223	ENST00000556616	FHAD1	B1AJZ9	1412 aa		11.56	□□□□□ -0.56
PRMT5-223	ENST00000556616	CTTNBP2	Q8WZ74	1663 aa		11.55	□□□□□ -0.56
PRMT5-223	ENST00000556616	EIF4G3	O43432	1585 aa	Known RBP	11.55	□□□□□ -0.56
PRMT5-223	ENST00000556616	TRIM26	Q12899	539 aa	Predicted RBP	11.55	□□□□□ -0.56
PRMT5-223	ENST00000556616	AQR	O60306	1485 aa	Known RBP eCLIP	11.55	□□□□□ -0.56	3e-6	■■■■■ 27.4
PRMT5-223	ENST00000556616	EFCAB5	A4FU69	1503 aa		11.53	□□□□□ -0.56
PRMT5-223	ENST00000556616	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.5	□□□□□ -0.57
PRMT5-223	ENST00000556616	SAMD9	Q5K651	1589 aa		11.5	□□□□□ -0.57
PRMT5-223	ENST00000556616	P3H3	Q8IVL6	736 aa		11.49	□□□□□ -0.57
PRMT5-223	ENST00000556616	MAP3K1	Q13233	1512 aa		11.48	□□□□□ -0.57
PRMT5-223	ENST00000556616	SNAPC4	Q5SXM2	1469 aa		11.47	□□□□□ -0.57
PRMT5-223	ENST00000556616	PITPNM1	O00562	1244 aa		11.46	□□□□□ -0.57
PRMT5-223	ENST00000556616	PCGF6	Q9BYE7	350 aa		11.46	□□□□□ -0.57
PRMT5-223	ENST00000556616	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.45	□□□□□ -0.58
PRMT5-223	ENST00000556616	SYNJ2	O15056	1496 aa		11.44	□□□□□ -0.58
PRMT5-223	ENST00000556616	GRIN2A	Q12879	1464 aa		11.44	□□□□□ -0.58
PRMT5-223	ENST00000556616	UGGT2	Q9NYU1	1516 aa		11.44	□□□□□ -0.58
PRMT5-223	ENST00000556616	IQGAP2	Q13576	1575 aa		11.43	□□□□□ -0.58
PRMT5-223	ENST00000556616	CADPS2	Q86UW7	1296 aa		11.43	□□□□□ -0.58
PRMT5-223	ENST00000556616	GTF3C3	Q9Y5Q9	886 aa		11.43	□□□□□ -0.58
PRMT5-223	ENST00000556616	KIAA0586	Q9BVV6	1533 aa		11.42	□□□□□ -0.58
PRMT5-223	ENST00000556616	WDR70	Q9NW82	654 aa		11.42	□□□□□ -0.58
PRMT5-223	ENST00000556616	NUP160	Q12769	1436 aa		11.41	□□□□□ -0.58
PRMT5-223	ENST00000556616	PDAP1	Q13442	181 aa	Known RBP	11.4	□□□□□ -0.58
PRMT5-223	ENST00000556616	TIMELESS	Q9UNS1	1208 aa		11.4	□□□□□ -0.58
PRMT5-223	ENST00000556616	FYCO1	Q9BQS8	1478 aa		11.39	□□□□□ -0.59
PRMT5-223	ENST00000556616	PCF11	O94913	1555 aa	Known RBP	11.39	□□□□□ -0.59
PRMT5-223	ENST00000556616	KCNV2	Q8TDN2	545 aa		11.39	□□□□□ -0.59
PRMT5-223	ENST00000556616	CASKIN1	Q8WXD9	1431 aa		11.39	□□□□□ -0.59
PRMT5-223	ENST00000556616	TIAM1	Q13009	1591 aa		11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	FHOD3	Q2V2M9	1422 aa		11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	FMN1	Q68DA7	1419 aa		11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	TULP1	O00294	542 aa	Predicted RBP	11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	TMEM132A	Q24JP5	1023 aa		11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	CFAP43	Q8NDM7	1665 aa		11.38	□□□□□ -0.59
PRMT5-223	ENST00000556616	CEP170	Q5SW79	1584 aa		11.37	□□□□□ -0.59
PRMT5-223	ENST00000556616	RANGAP1	P46060	587 aa	Predicted RBP	11.36	□□□□□ -0.59
PRMT5-223	ENST00000556616	PCDHB8	Q9UN66	801 aa		11.35	□□□□□ -0.59
PRMT5-223	ENST00000556616	PCDHB13	Q9Y5F0	798 aa		11.35	□□□□□ -0.59
PRMT5-223	ENST00000556616	DISP1	Q96F81	1524 aa		11.35	□□□□□ -0.59
PRMT5-223	ENST00000556616	MFRP	Q9BY79	579 aa		11.34	□□□□□ -0.59
PRMT5-223	ENST00000556616	CHADL	Q6NUI6	762 aa		11.33	□□□□□ -0.6
PRMT5-223	ENST00000556616	LMOD2	Q6P5Q4	547 aa		11.33	□□□□□ -0.6
PRMT5-223	ENST00000556616	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.33	□□□□□ -0.6
PRMT5-223	ENST00000556616	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.33	□□□□□ -0.6
PRMT5-223	ENST00000556616	KIAA0556	O60303	1618 aa		11.33	□□□□□ -0.6
PRMT5-223	ENST00000556616	PSEN1	P49768	467 aa		11.32	□□□□□ -0.6
PRMT5-223	ENST00000556616	ZNF579	Q8NAF0	562 aa	Known RBP	11.32	□□□□□ -0.6
PRMT5-223	ENST00000556616	LRRC9	Q6ZRR7	1453 aa		11.32	□□□□□ -0.6
PRMT5-223	ENST00000556616	ERICH6	Q7L0X2	663 aa		11.31	□□□□□ -0.6
PRMT5-223	ENST00000556616	RRBP1	Q9P2E9	1410 aa	Known RBP	11.3	□□□□□ -0.6
PRMT5-223	ENST00000556616	KANK4	Q5T7N3	995 aa	Predicted RBP	11.3	□□□□□ -0.6
PRMT5-223	ENST00000556616	CCDC61	Q9Y6R9	512 aa		11.3	□□□□□ -0.6
PRMT5-223	ENST00000556616	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.29	□□□□□ -0.6
PRMT5-223	ENST00000556616	LRRIQ1	Q96JM4	1722 aa		11.29	□□□□□ -0.6
PRMT5-223	ENST00000556616	HRC	P23327	699 aa		11.28	□□□□□ -0.6
PRMT5-223	ENST00000556616	ARHGEF1	Q92888	912 aa	Known RBP	11.27	□□□□□ -0.61
PRMT5-223	ENST00000556616	HECW1	Q76N89	1606 aa		11.27	□□□□□ -0.61
PRMT5-223	ENST00000556616	SHROOM2	Q13796	1616 aa		11.26	□□□□□ -0.61
PRMT5-223	ENST00000556616	CHD1	O14646	1710 aa		11.26	□□□□□ -0.61
PRMT5-223	ENST00000556616	CCDC18	Q5T9S5	1454 aa		11.25	□□□□□ -0.61
PRMT5-223	ENST00000556616	PPP1R37	O75864	691 aa		11.25	□□□□□ -0.61
PRMT5-223	ENST00000556616	FBXO22	Q8NEZ5	403 aa		11.23	□□□□□ -0.61
PRMT5-223	ENST00000556616	ARHGEF11	O15085	1522 aa		11.23	□□□□□ -0.61
PRMT5-223	ENST00000556616	EPRS	P07814	1512 aa	Known RBP	11.22	□□□□□ -0.61
PRMT5-223	ENST00000556616	E2F4	Q16254	413 aa		11.22	□□□□□ -0.61
PRMT5-223	ENST00000556616	EHBP1L1	Q8N3D4	1523 aa		11.22	□□□□□ -0.61
PRMT5-223	ENST00000556616	CLASP1	Q7Z460	1538 aa		11.21	□□□□□ -0.61
PRMT5-223	ENST00000556616	CARMIL2	Q6F5E8	1435 aa		11.21	□□□□□ -0.61
PRMT5-223	ENST00000556616	SOX12	O15370	315 aa		11.21	□□□□□ -0.61
PRMT5-223	ENST00000556616	NLRP6	P59044	892 aa		11.21	□□□□□ -0.61
PRMT5-223	ENST00000556616	JPH4	Q96JJ6	628 aa		11.21	□□□□□ -0.61
PRMT5-223	ENST00000556616	RAPGEF6	Q8TEU7	1601 aa		11.2	□□□□□ -0.62
PRMT5-223	ENST00000556616	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.2	□□□□□ -0.62
PRMT5-223	ENST00000556616	EFCAB3	Q8N7B9	438 aa		11.2	□□□□□ -0.62
PRMT5-223	ENST00000556616	ABCA8	O94911	1581 aa		11.2	□□□□□ -0.62
PRMT5-223	ENST00000556616	MAGI3	Q5TCQ9	1506 aa		11.19	□□□□□ -0.62
PRMT5-223	ENST00000556616	NUP153	P49790	1475 aa	Known RBP	11.19	□□□□□ -0.62
PRMT5-223	ENST00000556616	PHLDB1	Q86UU1	1377 aa		11.19	□□□□□ -0.62
PRMT5-223	ENST00000556616	CCNB3	Q8WWL7	1395 aa		11.19	□□□□□ -0.62
PRMT5-223	ENST00000556616	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.19	□□□□□ -0.62
PRMT5-223	ENST00000556616	IFNL1	Q8IU54	200 aa		11.19	□□□□□ -0.62
PRMT5-223	ENST00000556616	ZC3H15	Q8WU90	426 aa	Known RBP	11.18	□□□□□ -0.62
PRMT5-223	ENST00000556616	TESPA1	A2RU30	521 aa	Predicted RBP	11.17	□□□□□ -0.62
PRMT5-223	ENST00000556616	PRKAR2A	P13861	404 aa	Known RBP	11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms