RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-208ENST00000556067 SYNJ1O43426 1573 aa8.97□□□□□ -0.97
ATL1-208ENST00000556067 TOP2BQ02880 1626 aa8.97□□□□□ -0.97
ATL1-208ENST00000556067 COLQQ9Y215 455 aaPredicted RBP8.96□□□□□ -0.98
ATL1-208ENST00000556067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.95□□□□□ -0.98
ATL1-208ENST00000556067 BIVM-ERCC5R4GMW8 1640 aa8.94□□□□□ -0.98
ATL1-208ENST00000556067 CUX1P39880 1505 aa8.94□□□□□ -0.98
ATL1-208ENST00000556067 POTEFA5A3E0 1075 aa8.93□□□□□ -0.98
ATL1-208ENST00000556067 IRX5P78411 483 aaPredicted RBP8.93□□□□□ -0.98
ATL1-208ENST00000556067 LHX8Q68G74 356 aa8.93□□□□□ -0.98
ATL1-208ENST00000556067 OCEL1Q9H607 264 aa8.93□□□□□ -0.98
ATL1-208ENST00000556067 ERCC6Q03468 1493 aa8.93□□□□□ -0.98
ATL1-208ENST00000556067 DNMBPQ6XZF7 1577 aa8.92□□□□□ -0.98
ATL1-208ENST00000556067 SOGA1O94964 1423 aa8.91□□□□□ -0.98
ATL1-208ENST00000556067 LOC105371045A0A1W2PR82 267 aa8.91□□□□□ -0.98
ATL1-208ENST00000556067 HS6ST3Q8IZP7 471 aa8.91□□□□□ -0.98
ATL1-208ENST00000556067 POTEB2H3BUK9 544 aa8.9□□□□□ -0.98
ATL1-208ENST00000556067 TOPBP1Q92547 1522 aa8.9□□□□□ -0.99
ATL1-208ENST00000556067 KIF27Q86VH2 1401 aa8.89□□□□□ -0.99
ATL1-208ENST00000556067 PHF8Q9UPP1 1060 aa8.89□□□□□ -0.99
ATL1-208ENST00000556067 FGD5Q6ZNL6 1462 aa8.89□□□□□ -0.99
ATL1-208ENST00000556067 MRC2Q9UBG0 1479 aa8.89□□□□□ -0.99
ATL1-208ENST00000556067 SOX12O15370 315 aa8.87□□□□□ -0.99
ATL1-208ENST00000556067 DPY19L2Q6NUT2 758 aa8.87□□□□□ -0.99
ATL1-208ENST00000556067 PDCD7Q8N8D1 485 aaKnown RBP8.87□□□□□ -0.99
ATL1-208ENST00000556067 KIF21AQ7Z4S6 1674 aa8.87□□□□□ -0.99
ATL1-208ENST00000556067 URB2Q14146 1524 aaKnown RBP8.86□□□□□ -0.99
ATL1-208ENST00000556067 CUX2O14529 1486 aa8.85□□□□□ -0.99
ATL1-208ENST00000556067 UBTFP17480 764 aaKnown RBP8.85□□□□□ -0.99
ATL1-208ENST00000556067 NLRP6P59044 892 aa8.85□□□□□ -0.99
ATL1-208ENST00000556067 RUSC2Q8N2Y8 1516 aa8.85□□□□□ -0.99
ATL1-208ENST00000556067 POLA1P09884 1462 aaPredicted RBP8.84□□□□□ -0.99
ATL1-208ENST00000556067 G3V3G9 751 aa8.84□□□□□ -0.99
ATL1-208ENST00000556067 POTEJP0CG39 1038 aa8.84□□□□□ -0.99
ATL1-208ENST00000556067 MFRPQ9BY79 579 aa8.84□□□□□ -0.99
ATL1-208ENST00000556067 MS4A4AQ96JQ5 239 aa8.82□□□□□ -1
ATL1-208ENST00000556067 GOLGA3Q08378 1498 aa8.82□□□□□ -1
ATL1-208ENST00000556067 RAD54L2Q9Y4B4 1467 aa8.82□□□□□ -1
ATL1-208ENST00000556067 ABCA10Q8WWZ4 1543 aa8.81□□□□□ -1
ATL1-208ENST00000556067 L3MBTL3Q96JM7 780 aaPredicted RBP8.81□□□□□ -1
ATL1-208ENST00000556067 NKX1-1Q15270 411 aaPredicted RBP8.8□□□□□ -1
ATL1-208ENST00000556067 ILDR1Q86SU0 546 aaPredicted RBP8.8□□□□□ -1
ATL1-208ENST00000556067 FBXO22Q8NEZ5 403 aa8.8□□□□□ -1
ATL1-208ENST00000556067 SCUBE2Q9NQ36 999 aa8.8□□□□□ -1
ATL1-208ENST00000556067 WDR62O43379 1518 aa8.8□□□□□ -1
ATL1-208ENST00000556067 IFT140Q96RY7 1462 aa8.79□□□□□ -1
ATL1-208ENST00000556067 MAMSTRQ6ZN01 415 aa8.79□□□□□ -1
ATL1-208ENST00000556067 TNIKQ9UKE5 1360 aa8.78□□□□□ -1
ATL1-208ENST00000556067 C3orf67Q6ZVT6 689 aa8.78□□□□□ -1
ATL1-208ENST00000556067 OTUD5Q96G74 571 aa8.78□□□□□ -1
ATL1-208ENST00000556067 BOLA1Q9Y3E2 137 aa8.78□□□□□ -1
ATL1-208ENST00000556067 KIF21BO75037 1637 aa8.78□□□□□ -1
ATL1-208ENST00000556067 IGF1RP08069 1367 aa8.77□□□□□ -1.01
ATL1-208ENST00000556067 TDRD9Q8NDG6 1382 aaKnown RBP8.77□□□□□ -1.01
ATL1-208ENST00000556067 CARMIL1Q5VZK9 1371 aa8.76□□□□□ -1.01
ATL1-208ENST00000556067 GAPVD1Q14C86 1478 aa8.76□□□□□ -1.01
ATL1-208ENST00000556067 BBXQ8WY36 941 aaPredicted RBP8.75□□□□□ -1.01
ATL1-208ENST00000556067 DNAJC5Q9H3Z4 198 aa8.75□□□□□ -1.01
ATL1-208ENST00000556067 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.75□□□□□ -1.01
ATL1-208ENST00000556067 PRXQ9BXM0 1461 aa8.75□□□□□ -1.01
ATL1-208ENST00000556067 ERICH3Q5RHP9 1530 aa8.75□□□□□ -1.01
ATL1-208ENST00000556067 THOC2Q8NI27 1593 aaKnown RBP8.74□□□□□ -1.01
ATL1-208ENST00000556067 PPP1R37O75864 691 aa8.74□□□□□ -1.01
ATL1-208ENST00000556067 MICALL2Q8IY33 904 aa8.74□□□□□ -1.01
ATL1-208ENST00000556067 RAPGEF2Q9Y4G8 1499 aa8.74□□□□□ -1.01
ATL1-208ENST00000556067 SLAIN1Q8ND83 568 aa8.73□□□□□ -1.01
ATL1-208ENST00000556067 TARBP1Q13395 1621 aaKnown RBP8.72□□□□□ -1.01
ATL1-208ENST00000556067 RYDENQ9NUL5 291 aaKnown RBP8.72□□□□□ -1.01
ATL1-208ENST00000556067 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.72□□□□□ -1.01
ATL1-208ENST00000556067 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
ATL1-208ENST00000556067 GTPBP6O43824 516 aaPredicted RBP8.71□□□□□ -1.02
ATL1-208ENST00000556067 CUL7Q14999 1698 aa8.71□□□□□ -1.02
ATL1-208ENST00000556067 CEP162Q5TB80 1403 aa8.71□□□□□ -1.02
ATL1-208ENST00000556067 AQRO60306 1485 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATL1-208ENST00000556067 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
ATL1-208ENST00000556067 ABCA5Q8WWZ7 1642 aa8.7□□□□□ -1.02
ATL1-208ENST00000556067 RANGAP1P46060 587 aaPredicted RBP8.7□□□□□ -1.02
ATL1-208ENST00000556067 CFAP44Q96MT7 982 aa8.7□□□□□ -1.02
ATL1-208ENST00000556067 PAXIP1Q6ZW49 1069 aaPredicted RBP8.68□□□□□ -1.02
ATL1-208ENST00000556067 FHAD1B1AJZ9 1412 aa8.68□□□□□ -1.02
ATL1-208ENST00000556067 CLIP1P30622 1438 aa8.68□□□□□ -1.02
ATL1-208ENST00000556067 TMEM121BQ9BXQ6 578 aaPredicted RBP8.67□□□□□ -1.02
ATL1-208ENST00000556067 ZNF608Q9ULD9 1512 aaPredicted RBP8.67□□□□□ -1.02
ATL1-208ENST00000556067 SPRYD3Q8NCJ5 442 aa8.66□□□□□ -1.02
ATL1-208ENST00000556067 CHMP7Q8WUX9 453 aaPredicted RBP8.66□□□□□ -1.02
ATL1-208ENST00000556067 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
ATL1-208ENST00000556067 EIF4G3O43432 1585 aaKnown RBP8.64□□□□□ -1.03
ATL1-208ENST00000556067 SNAPC4Q5SXM2 1469 aa8.63□□□□□ -1.03
ATL1-208ENST00000556067 MAGI1Q96QZ7 1491 aaPredicted RBP8.63□□□□□ -1.03
ATL1-208ENST00000556067 TMEM92Q6UXU6 159 aa8.62□□□□□ -1.03
ATL1-208ENST00000556067 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
ATL1-208ENST00000556067 SYNJ2O15056 1496 aa8.6□□□□□ -1.03
ATL1-208ENST00000556067 TMC2Q8TDI7 906 aa8.6□□□□□ -1.03
ATL1-208ENST00000556067 VPS8Q8N3P4 1428 aa8.58□□□□□ -1.04
ATL1-208ENST00000556067 FAM163AQ96GL9 167 aaPredicted RBP8.58□□□□□ -1.04
ATL1-208ENST00000556067 GRIN2AQ12879 1464 aa8.57□□□□□ -1.04
ATL1-208ENST00000556067 C2orf72A6NCS6 295 aa8.57□□□□□ -1.04
ATL1-208ENST00000556067 EFCAB5A4FU69 1503 aa8.56□□□□□ -1.04
ATL1-208ENST00000556067 P3H3Q8IVL6 736 aa8.56□□□□□ -1.04
ATL1-208ENST00000556067 CTTNBP2Q8WZ74 1663 aa8.56□□□□□ -1.04
ATL1-208ENST00000556067 ARHGAP35Q9NRY4 1499 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms