RNA–Protein interactions for RNA: ENST00000556067.1

ATL1-208, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-208ENST00000556067 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
ATL1-208ENST00000556067 CHIC1Q5VXU3 224 aa18.02■□□□□ 0.48
ATL1-208ENST00000556067 PHF23Q9BUL5 403 aaPredicted RBP15.83■□□□□ 0.12
ATL1-208ENST00000556067 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
ATL1-208ENST00000556067 FOXD1Q16676 465 aa14.66□□□□□ -0.06
ATL1-208ENST00000556067 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
ATL1-208ENST00000556067 ADRA2BP18089 450 aa14.04□□□□□ -0.16
ATL1-208ENST00000556067 PPP6R1Q9UPN7 881 aa14.03□□□□□ -0.16
ATL1-208ENST00000556067 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
ATL1-208ENST00000556067 MSH5O43196 834 aa13.55□□□□□ -0.24
ATL1-208ENST00000556067 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
ATL1-208ENST00000556067 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
ATL1-208ENST00000556067 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
ATL1-208ENST00000556067 POTEDQ86YR6 584 aa12.56□□□□□ -0.4
ATL1-208ENST00000556067 DMRT2Q9Y5R5 561 aa12.56□□□□□ -0.4
ATL1-208ENST00000556067 CNKSR2Q8WXI2 1034 aa12.5□□□□□ -0.41
ATL1-208ENST00000556067 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
ATL1-208ENST00000556067 KCNA4P22459 653 aa12.46□□□□□ -0.41
ATL1-208ENST00000556067 NISCHQ9Y2I1 1504 aa12.41□□□□□ -0.42
ATL1-208ENST00000556067 NPM3O75607 178 aaKnown RBP12.31□□□□□ -0.44
ATL1-208ENST00000556067 RNF216Q9NWF9 866 aaPredicted RBP12.27□□□□□ -0.45
ATL1-208ENST00000556067 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
ATL1-208ENST00000556067 DCAF8L1A6NGE4 600 aa12.18□□□□□ -0.46
ATL1-208ENST00000556067 SLC4A1APQ9BWU0 796 aaKnown RBP11.85□□□□□ -0.51
ATL1-208ENST00000556067 DNAJC5BQ9UF47 199 aa11.8□□□□□ -0.52
ATL1-208ENST00000556067 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.76□□□□□ -0.53
ATL1-208ENST00000556067 SLC4A2P04920 1241 aa11.63□□□□□ -0.55
ATL1-208ENST00000556067 RNF39Q9H2S5 420 aa11.58□□□□□ -0.56
ATL1-208ENST00000556067 U3KPZ7 1027 aaPredicted RBP11.51□□□□□ -0.57
ATL1-208ENST00000556067 FOXD4L1Q9NU39 408 aa11.48□□□□□ -0.57
ATL1-208ENST00000556067 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
ATL1-208ENST00000556067 CACNB1Q02641 598 aaPredicted RBP11.45□□□□□ -0.58
ATL1-208ENST00000556067 ZBTB22O15209 634 aa11.44□□□□□ -0.58
ATL1-208ENST00000556067 C1QBPQ07021 282 aaKnown RBP11.44□□□□□ -0.58
ATL1-208ENST00000556067 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
ATL1-208ENST00000556067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
ATL1-208ENST00000556067 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
ATL1-208ENST00000556067 CSRNP3Q8WYN3 585 aa11.29□□□□□ -0.6
ATL1-208ENST00000556067 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
ATL1-208ENST00000556067 CAPN15O75808 1086 aa11.25□□□□□ -0.61
ATL1-208ENST00000556067 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
ATL1-208ENST00000556067 APLP2Q06481 763 aa11.23□□□□□ -0.61
ATL1-208ENST00000556067 TRHP20396 242 aaPredicted RBP11.18□□□□□ -0.62
ATL1-208ENST00000556067 ATF5Q9Y2D1 282 aaPredicted RBP11.1□□□□□ -0.63
ATL1-208ENST00000556067 ZNF219Q9P2Y4 722 aaPredicted RBP11.09□□□□□ -0.63
ATL1-208ENST00000556067 ABCB7O75027 752 aa11.04□□□□□ -0.64
ATL1-208ENST00000556067 ATXN8OSP0DMR3 200 aa11.03□□□□□ -0.64
ATL1-208ENST00000556067 DSG3P32926 999 aa11.01□□□□□ -0.65
ATL1-208ENST00000556067 POLA2Q14181 598 aa10.92□□□□□ -0.66
ATL1-208ENST00000556067 CCDC180Q9P1Z9 1646 aa10.84□□□□□ -0.67
ATL1-208ENST00000556067 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
ATL1-208ENST00000556067 FBLN2P98095 1184 aa10.66□□□□□ -0.7
ATL1-208ENST00000556067 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
ATL1-208ENST00000556067 OSCARQ8IYS5 282 aa10.58□□□□□ -0.72
ATL1-208ENST00000556067 RBM42Q9BTD8 480 aaKnown RBP10.5□□□□□ -0.73
ATL1-208ENST00000556067 SPDYE2BA6NHP3 402 aa10.4□□□□□ -0.74
ATL1-208ENST00000556067 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.74
ATL1-208ENST00000556067 SPDYE6P0CI01 402 aa10.4□□□□□ -0.74
ATL1-208ENST00000556067 SPDYE2Q495Y8 402 aa10.4□□□□□ -0.74
ATL1-208ENST00000556067 ZCCHC6Q5VYS8 1495 aaKnown RBP10.39□□□□□ -0.75
ATL1-208ENST00000556067 ZNF692Q9BU19 519 aaPredicted RBP10.39□□□□□ -0.75
ATL1-208ENST00000556067 SPDYE4A6NLX3 237 aa10.33□□□□□ -0.76
ATL1-208ENST00000556067 AKT1S1Q96B36 256 aa10.33□□□□□ -0.76
ATL1-208ENST00000556067 ABCC9O60706 1549 aa10.33□□□□□ -0.76
ATL1-208ENST00000556067 SSUH2Q9Y2M2 353 aa10.28□□□□□ -0.76
ATL1-208ENST00000556067 FKBP8Q14318 412 aa10.27□□□□□ -0.77
ATL1-208ENST00000556067 DCAF1Q9Y4B6 1507 aa10.27□□□□□ -0.77
ATL1-208ENST00000556067 REM2Q8IYK8 340 aaPredicted RBP10.26□□□□□ -0.77
ATL1-208ENST00000556067 PABPN1Q86U42 306 aaKnown RBP eCLIP10.25□□□□□ -0.77
ATL1-208ENST00000556067 CLEC11AQ9Y240 323 aa10.18□□□□□ -0.78
ATL1-208ENST00000556067 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
ATL1-208ENST00000556067 PITPNM1O00562 1244 aa10.15□□□□□ -0.78
ATL1-208ENST00000556067 NACADO15069 1562 aa10.14□□□□□ -0.79
ATL1-208ENST00000556067 SPDYE1Q8NFV5 336 aaPredicted RBP10.14□□□□□ -0.79
ATL1-208ENST00000556067 CHRDL2Q6WN34 429 aa10.12□□□□□ -0.79
ATL1-208ENST00000556067 SHROOM4Q9ULL8 1493 aa10.11□□□□□ -0.79
ATL1-208ENST00000556067 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
ATL1-208ENST00000556067 PROM2Q8N271 834 aa10.04□□□□□ -0.8
ATL1-208ENST00000556067 PRR29P0C7W0 189 aa10.03□□□□□ -0.8
ATL1-208ENST00000556067 STAG3Q9UJ98 1225 aa10.01□□□□□ -0.81
ATL1-208ENST00000556067 PIP4P2Q8N4L2 257 aa9.97□□□□□ -0.81
ATL1-208ENST00000556067 SCRIBQ14160 1630 aa9.96□□□□□ -0.82
ATL1-208ENST00000556067 FXR2P51116 673 aaKnown RBP eCLIP9.94□□□□□ -0.82
ATL1-208ENST00000556067 POTEHQ6S545 545 aa9.93□□□□□ -0.82
ATL1-208ENST00000556067 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
ATL1-208ENST00000556067 CHADLQ6NUI6 762 aa9.92□□□□□ -0.82
ATL1-208ENST00000556067 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
ATL1-208ENST00000556067 MIER1Q8N108 512 aa9.84□□□□□ -0.83
ATL1-208ENST00000556067 CREBZFQ9NS37 354 aa9.83□□□□□ -0.84
ATL1-208ENST00000556067 PLCD3Q8N3E9 789 aa9.82□□□□□ -0.84
ATL1-208ENST00000556067 PLEKHG5O94827 1062 aa9.8□□□□□ -0.84
ATL1-208ENST00000556067 FARP1Q9Y4F1 1045 aaPredicted RBP9.77□□□□□ -0.85
ATL1-208ENST00000556067 SUPT5HO00267 1087 aaKnown RBP9.76□□□□□ -0.85
ATL1-208ENST00000556067 VASPP50552 380 aaPredicted RBP9.76□□□□□ -0.85
ATL1-208ENST00000556067 HAX1O00165 279 aa9.73□□□□□ -0.85
ATL1-208ENST00000556067 UNC13AQ9UPW8 1703 aa9.73□□□□□ -0.85
ATL1-208ENST00000556067 NPM1P06748 294 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATL1-208ENST00000556067 KLHL34Q8N239 644 aa9.69□□□□□ -0.86
ATL1-208ENST00000556067 BICRAQ9NZM4 1560 aa9.67□□□□□ -0.86
ATL1-208ENST00000556067 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms