RNA–Protein interactions for RNA: ENST00000553496.1

LINC01146-201, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3

Gene LINC01146, Length 425 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-201ENST00000553496 TRIM41Q8WV44 630 aa14.27□□□□□ -0.13
LINC01146-201ENST00000553496 CABP2Q9NPB3 220 aa14.26□□□□□ -0.13
LINC01146-201ENST00000553496 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.26□□□□□ -0.13
LINC01146-201ENST00000553496 WDR62O43379 1518 aa14.25□□□□□ -0.13
LINC01146-201ENST00000553496 ST18O60284 1047 aa14.24□□□□□ -0.13
LINC01146-201ENST00000553496 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
LINC01146-201ENST00000553496 L3MBTL3Q96JM7 780 aaPredicted RBP14.22□□□□□ -0.13
LINC01146-201ENST00000553496 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
LINC01146-201ENST00000553496 SUPT5HO00267 1087 aaKnown RBP14.2□□□□□ -0.14
LINC01146-201ENST00000553496 RNF25Q96BH1 459 aaPredicted RBP14.18□□□□□ -0.14
LINC01146-201ENST00000553496 ABCC8Q09428 1581 aa14.17□□□□□ -0.14
LINC01146-201ENST00000553496 C3orf67Q6ZVT6 689 aa14.16□□□□□ -0.14
LINC01146-201ENST00000553496 PRDM2Q13029 1718 aa14.14□□□□□ -0.15
LINC01146-201ENST00000553496 URB2Q14146 1524 aaKnown RBP14.14□□□□□ -0.15
LINC01146-201ENST00000553496 EFCAB3Q8N7B9 438 aa14.12□□□□□ -0.15
LINC01146-201ENST00000553496 RIOK3O14730 519 aaKnown RBP14.11□□□□□ -0.15
LINC01146-201ENST00000553496 SNPHO15079 494 aa14.11□□□□□ -0.15
LINC01146-201ENST00000553496 CDAN1Q8IWY9 1227 aa14.09□□□□□ -0.15
LINC01146-201ENST00000553496 TMEM121BQ9BXQ6 578 aaPredicted RBP14.08□□□□□ -0.16
LINC01146-201ENST00000553496 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
LINC01146-201ENST00000553496 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
LINC01146-201ENST00000553496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.05□□□□□ -0.16
LINC01146-201ENST00000553496 ZFP91Q96JP5 570 aaPredicted RBP14.05□□□□□ -0.16
LINC01146-201ENST00000553496 DNMBPQ6XZF7 1577 aa14.05□□□□□ -0.16
LINC01146-201ENST00000553496 IFT140Q96RY7 1462 aa14.04□□□□□ -0.16
LINC01146-201ENST00000553496 VGFO15240 615 aaPredicted RBP14.03□□□□□ -0.16
LINC01146-201ENST00000553496 DNAJC5Q9H3Z4 198 aa14.02□□□□□ -0.17
LINC01146-201ENST00000553496 MARVELD3Q96A59 401 aa14□□□□□ -0.17
LINC01146-201ENST00000553496 G3V3G9 751 aa13.97□□□□□ -0.17
LINC01146-201ENST00000553496 SOX12O15370 315 aa13.97□□□□□ -0.17
LINC01146-201ENST00000553496 MS4A4AQ96JQ5 239 aa13.97□□□□□ -0.17
LINC01146-201ENST00000553496 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
LINC01146-201ENST00000553496 HOXB3P14651 431 aaPredicted RBP13.94□□□□□ -0.18
LINC01146-201ENST00000553496 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
LINC01146-201ENST00000553496 CUX1P39880 1505 aa13.93□□□□□ -0.18
LINC01146-201ENST00000553496 SOGA1O94964 1423 aa13.91□□□□□ -0.18
LINC01146-201ENST00000553496 MICALL2Q8IY33 904 aa13.91□□□□□ -0.18
LINC01146-201ENST00000553496 WDR97A6NE52 1622 aa13.9□□□□□ -0.19
LINC01146-201ENST00000553496 TARBP1Q13395 1621 aaKnown RBP13.9□□□□□ -0.19
LINC01146-201ENST00000553496 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
LINC01146-201ENST00000553496 FGD5Q6ZNL6 1462 aa13.88□□□□□ -0.19
LINC01146-201ENST00000553496 EMP3P54852 163 aa13.88□□□□□ -0.19
LINC01146-201ENST00000553496 PKD2Q13563 968 aa13.88□□□□□ -0.19
LINC01146-201ENST00000553496 BCL11BQ9C0K0 894 aaPredicted RBP13.88□□□□□ -0.19
LINC01146-201ENST00000553496 ZNF608Q9ULD9 1512 aaPredicted RBP13.88□□□□□ -0.19
LINC01146-201ENST00000553496 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
LINC01146-201ENST00000553496 POTEB3A0JP26 581 aa13.87□□□□□ -0.19
LINC01146-201ENST00000553496 POTEBQ6S5H4 581 aa13.87□□□□□ -0.19
LINC01146-201ENST00000553496 ECM2O94769 699 aaPredicted RBP13.85□□□□□ -0.19
LINC01146-201ENST00000553496 FBXO22Q8NEZ5 403 aa13.84□□□□□ -0.19
LINC01146-201ENST00000553496 RAD54L2Q9Y4B4 1467 aa13.83□□□□□ -0.2
LINC01146-201ENST00000553496 TAOK2Q9UL54 1235 aa13.83□□□□□ -0.2
LINC01146-201ENST00000553496 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
LINC01146-201ENST00000553496 ABCA10Q8WWZ4 1543 aa13.82□□□□□ -0.2
LINC01146-201ENST00000553496 STK24Q9Y6E0 443 aa13.82□□□□□ -0.2
LINC01146-201ENST00000553496 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.2
LINC01146-201ENST00000553496 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
LINC01146-201ENST00000553496 FAM205CA6NFA0 338 aa13.8□□□□□ -0.2
LINC01146-201ENST00000553496 RGL2O15211 777 aa13.8□□□□□ -0.2
LINC01146-201ENST00000553496 NLRP6P59044 892 aa13.8□□□□□ -0.2
LINC01146-201ENST00000553496 TDRD9Q8NDG6 1382 aaKnown RBP13.8□□□□□ -0.2
LINC01146-201ENST00000553496 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
LINC01146-201ENST00000553496 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
LINC01146-201ENST00000553496 BIVM-ERCC5R4GMW8 1640 aa13.79□□□□□ -0.2
LINC01146-201ENST00000553496 HOXB1P14653 301 aaPredicted RBP13.78□□□□□ -0.2
LINC01146-201ENST00000553496 DOK7Q18PE1 504 aa13.78□□□□□ -0.2
LINC01146-201ENST00000553496 STK25O00506 426 aa13.77□□□□□ -0.21
LINC01146-201ENST00000553496 GRIN2BQ13224 1484 aa13.77□□□□□ -0.21
LINC01146-201ENST00000553496 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
LINC01146-201ENST00000553496 MAGI1Q96QZ7 1491 aaPredicted RBP13.75□□□□□ -0.21
LINC01146-201ENST00000553496 ZNF710Q8N1W2 664 aa13.75□□□□□ -0.21
LINC01146-201ENST00000553496 KRTAP3-3Q9BYR6 98 aa13.75□□□□□ -0.21
LINC01146-201ENST00000553496 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
LINC01146-201ENST00000553496 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
LINC01146-201ENST00000553496 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
LINC01146-201ENST00000553496 MMRN1Q13201 1228 aa13.71□□□□□ -0.21
LINC01146-201ENST00000553496 ABCA5Q8WWZ7 1642 aa13.69□□□□□ -0.22
LINC01146-201ENST00000553496 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
LINC01146-201ENST00000553496 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
LINC01146-201ENST00000553496 RIMBP2O15034 1052 aa13.67□□□□□ -0.22
LINC01146-201ENST00000553496 ERICH3Q5RHP9 1530 aa13.66□□□□□ -0.22
LINC01146-201ENST00000553496 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
LINC01146-201ENST00000553496 ZSWIM6Q9HCJ5 1215 aa13.66□□□□□ -0.22
LINC01146-201ENST00000553496 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
LINC01146-201ENST00000553496 ERBB3P21860 1342 aa13.64□□□□□ -0.23
LINC01146-201ENST00000553496 KIF3CO14782 793 aa13.62□□□□□ -0.23
LINC01146-201ENST00000553496 FHAD1B1AJZ9 1412 aa13.62□□□□□ -0.23
LINC01146-201ENST00000553496 KIF27Q86VH2 1401 aa13.61□□□□□ -0.23
LINC01146-201ENST00000553496 IGF1RP08069 1367 aa13.58□□□□□ -0.23
LINC01146-201ENST00000553496 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.24
LINC01146-201ENST00000553496 C2orf72A6NCS6 295 aa13.57□□□□□ -0.24
LINC01146-201ENST00000553496 PBRM1Q86U86 1689 aa13.56□□□□□ -0.24
LINC01146-201ENST00000553496 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
LINC01146-201ENST00000553496 PPP1R37O75864 691 aa13.56□□□□□ -0.24
LINC01146-201ENST00000553496 ARSIQ5FYB1 569 aa13.56□□□□□ -0.24
LINC01146-201ENST00000553496 NUP160Q12769 1436 aa13.56□□□□□ -0.24
LINC01146-201ENST00000553496 CLASP1Q7Z460 1538 aa13.55□□□□□ -0.24
LINC01146-201ENST00000553496 ADAMTS12P58397 1594 aa13.55□□□□□ -0.24
LINC01146-201ENST00000553496 CHD1O14646 1710 aa13.54□□□□□ -0.24
LINC01146-201ENST00000553496 KHSRPQ92945 711 aaKnown RBP eCLIP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms