RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 RRP1P56182 461 aaKnown RBP16.06■□□□□ 0.16
VDR-208ENST00000550325 BIVM-ERCC5R4GMW8 1640 aa16.05■□□□□ 0.16
VDR-208ENST00000550325 PCF11O94913 1555 aaKnown RBP16.05■□□□□ 0.16
VDR-208ENST00000550325 RCAN3Q9UKA8 241 aa16.05■□□□□ 0.16
VDR-208ENST00000550325 DDRGK1Q96HY6 314 aa16.05■□□□□ 0.16
VDR-208ENST00000550325 HFM1A2PYH4 1435 aa16.04■□□□□ 0.16
VDR-208ENST00000550325 NAIPQ13075 1403 aa16.03■□□□□ 0.16
VDR-208ENST00000550325 MAP3K1Q13233 1512 aa16.03■□□□□ 0.16
VDR-208ENST00000550325 WASHC2CQ9Y4E1 1318 aa16.02■□□□□ 0.15
VDR-208ENST00000550325 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
VDR-208ENST00000550325 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
VDR-208ENST00000550325 NCOA2Q15596 1464 aa16■□□□□ 0.15
VDR-208ENST00000550325 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
VDR-208ENST00000550325 PNISRQ8TF01 805 aaKnown RBP15.97■□□□□ 0.15
VDR-208ENST00000550325 FRAT2O75474 233 aaPredicted RBP15.97■□□□□ 0.15
VDR-208ENST00000550325 RNF123Q5XPI4 1314 aa15.97■□□□□ 0.15
VDR-208ENST00000550325 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
VDR-208ENST00000550325 RGS3P49796 1198 aa15.96■□□□□ 0.15
VDR-208ENST00000550325 CDCA7LQ96GN5 454 aa15.95■□□□□ 0.14
VDR-208ENST00000550325 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
VDR-208ENST00000550325 MS4A1P11836 297 aa15.94■□□□□ 0.14
VDR-208ENST00000550325 KDM2AQ9Y2K7 1162 aa15.94■□□□□ 0.14
VDR-208ENST00000550325 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
VDR-208ENST00000550325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.93■□□□□ 0.14
VDR-208ENST00000550325 KDM5BQ9UGL1 1544 aa15.93■□□□□ 0.14
VDR-208ENST00000550325 CASKIN1Q8WXD9 1431 aa15.9■□□□□ 0.14
VDR-208ENST00000550325 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
VDR-208ENST00000550325 FYCO1Q9BQS8 1478 aa15.89■□□□□ 0.13
VDR-208ENST00000550325 MYOM3Q5VTT5 1437 aa15.89■□□□□ 0.13
VDR-208ENST00000550325 CFAP43Q8NDM7 1665 aa15.88■□□□□ 0.13
VDR-208ENST00000550325 CFTRP13569 1480 aa15.88■□□□□ 0.13
VDR-208ENST00000550325 CARD11Q9BXL7 1154 aa15.87■□□□□ 0.13
VDR-208ENST00000550325 USP47Q96K76 1375 aa15.87■□□□□ 0.13
VDR-208ENST00000550325 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
VDR-208ENST00000550325 DCAF11Q8TEB1 546 aa15.87■□□□□ 0.13
VDR-208ENST00000550325 NAP1L5Q96NT1 182 aaPredicted RBP15.86■□□□□ 0.13
VDR-208ENST00000550325 PKNOX2Q96KN3 472 aa15.86■□□□□ 0.13
VDR-208ENST00000550325 FGD5Q6ZNL6 1462 aa15.85■□□□□ 0.13
VDR-208ENST00000550325 SLKQ9H2G2 1235 aaPredicted RBP15.85■□□□□ 0.13
VDR-208ENST00000550325 DHX29Q7Z478 1369 aaKnown RBP15.85■□□□□ 0.13
VDR-208ENST00000550325 CC2D1BQ5T0F9 858 aaKnown RBP15.84■□□□□ 0.13
VDR-208ENST00000550325 C20orf194Q5TEA3 1177 aa15.84■□□□□ 0.13
VDR-208ENST00000550325 VSIG10Q8N0Z9 540 aa15.84■□□□□ 0.13
VDR-208ENST00000550325 GLIPR1L2Q4G1C9 344 aa15.83■□□□□ 0.12
VDR-208ENST00000550325 FAM43AQ8N2R8 423 aa15.82■□□□□ 0.12
VDR-208ENST00000550325 MYBBP1AQ9BQG0 1328 aaKnown RBP15.81■□□□□ 0.12
VDR-208ENST00000550325 POGKQ9P215 609 aa15.81■□□□□ 0.12
VDR-208ENST00000550325 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
VDR-208ENST00000550325 ST20-MTHFSA0A0A6YYL1 179 aa15.8■□□□□ 0.12
VDR-208ENST00000550325 ZNF777Q9ULD5 760 aaPredicted RBP15.8■□□□□ 0.12
VDR-208ENST00000550325 FAM161AQ3B820 660 aa15.79■□□□□ 0.12
VDR-208ENST00000550325 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
VDR-208ENST00000550325 GZF1Q9H116 711 aaPredicted RBP15.78■□□□□ 0.12
VDR-208ENST00000550325 KIF15Q9NS87 1388 aa15.78■□□□□ 0.12
VDR-208ENST00000550325 SPRYD3Q8NCJ5 442 aa15.78■□□□□ 0.12
VDR-208ENST00000550325 NESP48681 1621 aa15.78■□□□□ 0.12
VDR-208ENST00000550325 DENND4BO75064 1496 aaPredicted RBP15.77■□□□□ 0.12
VDR-208ENST00000550325 ANKRD30BQ9BXX2 1392 aa15.77■□□□□ 0.11
VDR-208ENST00000550325 RALBP1Q15311 655 aa15.76■□□□□ 0.11
VDR-208ENST00000550325 KDM6BO15054 1643 aa15.76■□□□□ 0.11
VDR-208ENST00000550325 ZNF644Q9H582 1327 aaPredicted RBP15.75■□□□□ 0.11
VDR-208ENST00000550325 PKD2Q13563 968 aa15.75■□□□□ 0.11
VDR-208ENST00000550325 RAD54L2Q9Y4B4 1467 aa15.75■□□□□ 0.11
VDR-208ENST00000550325 PDE3BQ13370 1112 aa15.75■□□□□ 0.11
VDR-208ENST00000550325 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
VDR-208ENST00000550325 NLRP13Q86W25 1043 aa15.74■□□□□ 0.11
VDR-208ENST00000550325 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
VDR-208ENST00000550325 RPRD2Q5VT52 1461 aaKnown RBP15.72■□□□□ 0.11
VDR-208ENST00000550325 BRD4O60885 1362 aaPredicted RBP15.72■□□□□ 0.11
VDR-208ENST00000550325 CENPQQ7L2Z9 268 aaPredicted RBP15.72■□□□□ 0.11
VDR-208ENST00000550325 PNNQ9H307 717 aaKnown RBP15.72■□□□□ 0.11
VDR-208ENST00000550325 C8orf34Q49A92 452 aa15.71■□□□□ 0.1
VDR-208ENST00000550325 KTN1Q86UP2 1357 aaKnown RBP15.71■□□□□ 0.1
VDR-208ENST00000550325 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
VDR-208ENST00000550325 HSP90AA1P07900 732 aaKnown RBP15.68■□□□□ 0.1
VDR-208ENST00000550325 ZMYND15Q9H091 742 aa15.68■□□□□ 0.1
VDR-208ENST00000550325 EFCAB5A4FU69 1503 aa15.68■□□□□ 0.1
VDR-208ENST00000550325 TDRD9Q8NDG6 1382 aaKnown RBP15.68■□□□□ 0.1
VDR-208ENST00000550325 BECN1Q14457 450 aa15.67■□□□□ 0.1
VDR-208ENST00000550325 RGL3Q3MIN7 710 aa15.67■□□□□ 0.1
VDR-208ENST00000550325 L1TD1Q5T7N2 865 aaKnown RBP15.67■□□□□ 0.1
VDR-208ENST00000550325 ROCK2O75116 1388 aaKnown RBP15.67■□□□□ 0.1
VDR-208ENST00000550325 MIA2Q96PC5 1412 aa15.67■□□□□ 0.1
VDR-208ENST00000550325 TEX14Q8IWB6 1497 aa15.67■□□□□ 0.1
VDR-208ENST00000550325 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
VDR-208ENST00000550325 SUPT6HQ7KZ85 1726 aaKnown RBP15.67■□□□□ 0.1
VDR-208ENST00000550325 LRPPRCP42704 1394 aaKnown RBP15.67■□□□□ 0.1
VDR-208ENST00000550325 CANXP27824 592 aaKnown RBP15.66■□□□□ 0.1
VDR-208ENST00000550325 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.66■□□□□ 0.1
VDR-208ENST00000550325 SNAPC4Q5SXM2 1469 aa15.66■□□□□ 0.1
VDR-208ENST00000550325 PDS5BQ9NTI5 1447 aa15.65■□□□□ 0.1
VDR-208ENST00000550325 WDR43Q15061 677 aaKnown RBP eCLIP15.65■□□□□ 0.1
VDR-208ENST00000550325 HECW1Q76N89 1606 aa15.65■□□□□ 0.1
VDR-208ENST00000550325 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
VDR-208ENST00000550325 PANK2Q9BZ23 570 aa15.62■□□□□ 0.09
VDR-208ENST00000550325 EHBP1L1Q8N3D4 1523 aa15.62■□□□□ 0.09
VDR-208ENST00000550325 ADAMTS8Q9UP79 889 aa15.61■□□□□ 0.09
VDR-208ENST00000550325 BCORL1Q5H9F3 1711 aa15.61■□□□□ 0.09
VDR-208ENST00000550325 CCDC146Q8IYE0 955 aa15.6■□□□□ 0.09
VDR-208ENST00000550325 KDM2BQ8NHM5 1336 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms