RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 CEP164Q9UPV0 1460 aa15.32■□□□□ 0.04
CLPB-211ENST00000542555 PDAP1Q13442 181 aaKnown RBP15.25■□□□□ 0.03
CLPB-211ENST00000542555 CIZ1Q9ULV3 898 aaPredicted RBP15.24■□□□□ 0.03
CLPB-211ENST00000542555 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
CLPB-211ENST00000542555 G3V3G9 751 aa15.22■□□□□ 0.03
CLPB-211ENST00000542555 EMP3P54852 163 aa15.22■□□□□ 0.03
CLPB-211ENST00000542555 SPNS2Q8IVW8 549 aa15.21■□□□□ 0.03
CLPB-211ENST00000542555 MMRN1Q13201 1228 aa15.2■□□□□ 0.02
CLPB-211ENST00000542555 SPOCK2Q92563 424 aa15.2■□□□□ 0.02
CLPB-211ENST00000542555 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
CLPB-211ENST00000542555 WIZO95785 1651 aa15.16■□□□□ 0.02
CLPB-211ENST00000542555 CFTRP13569 1480 aa15.13■□□□□ 0.01
CLPB-211ENST00000542555 DPY19L2Q6NUT2 758 aa15.11■□□□□ 0.01
CLPB-211ENST00000542555 IFNLR1Q8IU57 520 aaPredicted RBP15.11■□□□□ 0.01
CLPB-211ENST00000542555 FAM205CA6NFA0 338 aa15.1■□□□□ 0.01
CLPB-211ENST00000542555 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
CLPB-211ENST00000542555 BOLA1Q9Y3E2 137 aa15.1■□□□□ 0.01
CLPB-211ENST00000542555 RIMBP3CA6NJZ7 1639 aa15.08■□□□□ 0
CLPB-211ENST00000542555 RIMBP3BA6NNM3 1639 aa15.08■□□□□ 0
CLPB-211ENST00000542555 RIMBP3Q9UFD9 1639 aa15.08■□□□□ 0
CLPB-211ENST00000542555 HS3ST6Q96QI5 342 aa15.07■□□□□ 0
CLPB-211ENST00000542555 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
CLPB-211ENST00000542555 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
CLPB-211ENST00000542555 IFT140Q96RY7 1462 aa15.02■□□□□ -0
CLPB-211ENST00000542555 ZNF710Q8N1W2 664 aa15.02■□□□□ -0
CLPB-211ENST00000542555 ARHGEF11O15085 1522 aa15.02□□□□□ -0.01
CLPB-211ENST00000542555 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
CLPB-211ENST00000542555 POTEB3A0JP26 581 aa14.96□□□□□ -0.01
CLPB-211ENST00000542555 POTEBQ6S5H4 581 aa14.96□□□□□ -0.01
CLPB-211ENST00000542555 DOK7Q18PE1 504 aa14.95□□□□□ -0.02
CLPB-211ENST00000542555 KRTAP3-3Q9BYR6 98 aa14.95□□□□□ -0.02
CLPB-211ENST00000542555 KRTAP3-2Q9BYR7 98 aa14.95□□□□□ -0.02
CLPB-211ENST00000542555 ZNF608Q9ULD9 1512 aaPredicted RBP14.94□□□□□ -0.02
CLPB-211ENST00000542555 RSF1Q96T23 1441 aaPredicted RBP14.93□□□□□ -0.02
CLPB-211ENST00000542555 ABCC8Q09428 1581 aa14.93□□□□□ -0.02
CLPB-211ENST00000542555 HOXB3P14651 431 aaPredicted RBP14.92□□□□□ -0.02
CLPB-211ENST00000542555 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
CLPB-211ENST00000542555 RIMBP2O15034 1052 aa14.91□□□□□ -0.02
CLPB-211ENST00000542555 PRDM2Q13029 1718 aa14.9□□□□□ -0.02
CLPB-211ENST00000542555 ERBB3P21860 1342 aa14.9□□□□□ -0.02
CLPB-211ENST00000542555 HOXB1P14653 301 aaPredicted RBP14.89□□□□□ -0.03
CLPB-211ENST00000542555 TOPBP1Q92547 1522 aa14.88□□□□□ -0.03
CLPB-211ENST00000542555 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
CLPB-211ENST00000542555 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
CLPB-211ENST00000542555 ARAP1Q96P48 1450 aa14.82□□□□□ -0.04
CLPB-211ENST00000542555 AQRO60306 1485 aaKnown RBP eCLIP14.81□□□□□ -0.04
CLPB-211ENST00000542555 DNMBPQ6XZF7 1577 aa14.8□□□□□ -0.04
CLPB-211ENST00000542555 CHD1O14646 1710 aa14.8□□□□□ -0.04
CLPB-211ENST00000542555 SOX12O15370 315 aa14.78□□□□□ -0.04
CLPB-211ENST00000542555 MICALL2Q8IY33 904 aa14.78□□□□□ -0.04
CLPB-211ENST00000542555 RIOK3O14730 519 aaKnown RBP14.77□□□□□ -0.05
CLPB-211ENST00000542555 VARS2Q5ST30 1063 aaKnown RBP14.76□□□□□ -0.05
CLPB-211ENST00000542555 CHMP7Q8WUX9 453 aaPredicted RBP14.76□□□□□ -0.05
CLPB-211ENST00000542555 ZSWIM6Q9HCJ5 1215 aa14.74□□□□□ -0.05
CLPB-211ENST00000542555 VGFO15240 615 aaPredicted RBP14.72□□□□□ -0.05
CLPB-211ENST00000542555 TARBP1Q13395 1621 aaKnown RBP14.72□□□□□ -0.05
CLPB-211ENST00000542555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.71□□□□□ -0.05
CLPB-211ENST00000542555 ZFP91Q96JP5 570 aaPredicted RBP14.71□□□□□ -0.05
CLPB-211ENST00000542555 SOGA1O94964 1423 aa14.71□□□□□ -0.05
CLPB-211ENST00000542555 POLA1P09884 1462 aaPredicted RBP14.69□□□□□ -0.06
CLPB-211ENST00000542555 TMEM92Q6UXU6 159 aa14.69□□□□□ -0.06
CLPB-211ENST00000542555 TDRD9Q8NDG6 1382 aaKnown RBP14.69□□□□□ -0.06
CLPB-211ENST00000542555 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
CLPB-211ENST00000542555 RNF166Q96A37 237 aaPredicted RBP14.67□□□□□ -0.06
CLPB-211ENST00000542555 PHF8Q9UPP1 1060 aa14.67□□□□□ -0.06
CLPB-211ENST00000542555 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
CLPB-211ENST00000542555 RAD54L2Q9Y4B4 1467 aa14.64□□□□□ -0.07
CLPB-211ENST00000542555 ZNF687Q8N1G0 1237 aa14.64□□□□□ -0.07
CLPB-211ENST00000542555 RNF25Q96BH1 459 aaPredicted RBP14.64□□□□□ -0.07
CLPB-211ENST00000542555 MS4A4AQ96JQ5 239 aa14.64□□□□□ -0.07
CLPB-211ENST00000542555 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
CLPB-211ENST00000542555 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
CLPB-211ENST00000542555 GPR153Q6NV75 609 aa14.62□□□□□ -0.07
CLPB-211ENST00000542555 TAOK2Q9UL54 1235 aa14.62□□□□□ -0.07
CLPB-211ENST00000542555 MYT1LQ9UL68 1186 aa14.62□□□□□ -0.07
CLPB-211ENST00000542555 CLASP1Q7Z460 1538 aa14.61□□□□□ -0.07
CLPB-211ENST00000542555 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
CLPB-211ENST00000542555 NLRP6P59044 892 aa14.59□□□□□ -0.07
CLPB-211ENST00000542555 SYNJ2O15056 1496 aa14.58□□□□□ -0.08
CLPB-211ENST00000542555 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
CLPB-211ENST00000542555 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
CLPB-211ENST00000542555 ARSIQ5FYB1 569 aa14.57□□□□□ -0.08
CLPB-211ENST00000542555 PTGER2P43116 358 aa14.53□□□□□ -0.08
CLPB-211ENST00000542555 BCL11BQ9C0K0 894 aaPredicted RBP14.53□□□□□ -0.08
CLPB-211ENST00000542555 ANKRD13DQ6ZTN6 518 aa14.51□□□□□ -0.09
CLPB-211ENST00000542555 STK24Q9Y6E0 443 aa14.51□□□□□ -0.09
CLPB-211ENST00000542555 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
CLPB-211ENST00000542555 FBXO22Q8NEZ5 403 aa14.46□□□□□ -0.09
CLPB-211ENST00000542555 KHSRPQ92945 711 aaKnown RBP eCLIP14.45□□□□□ -0.1
CLPB-211ENST00000542555 CUX1P39880 1505 aa14.45□□□□□ -0.1
CLPB-211ENST00000542555 PBRM1Q86U86 1689 aa14.44□□□□□ -0.1
CLPB-211ENST00000542555 STK25O00506 426 aa14.43□□□□□ -0.1
CLPB-211ENST00000542555 LSM11P83369 360 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLPB-211ENST00000542555 MFRPQ9BY79 579 aa14.39□□□□□ -0.11
CLPB-211ENST00000542555 ABCA10Q8WWZ4 1543 aa14.38□□□□□ -0.11
CLPB-211ENST00000542555 C2orf72A6NCS6 295 aa14.38□□□□□ -0.11
CLPB-211ENST00000542555 GRIN2AQ12879 1464 aa14.38□□□□□ -0.11
CLPB-211ENST00000542555 NUDT7P0C024 238 aa14.36□□□□□ -0.11
CLPB-211ENST00000542555 ECM2O94769 699 aaPredicted RBP14.35□□□□□ -0.11
CLPB-211ENST00000542555 ABCA5Q8WWZ7 1642 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms