RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 AEBP2Q6ZN18 517 aaPredicted RBP33.61■■■□□ 2.97
CLPB-211ENST00000542555 CHIC1Q5VXU3 224 aa31.71■■■□□ 2.67
CLPB-211ENST00000542555 SENP3Q9H4L4 574 aaPredicted RBP28.86■■■□□ 2.21
CLPB-211ENST00000542555 PHF23Q9BUL5 403 aaPredicted RBP28.41■■■□□ 2.14
CLPB-211ENST00000542555 FOXD1Q16676 465 aa26.86■■□□□ 1.89
CLPB-211ENST00000542555 MSH5O43196 834 aa25.35■■□□□ 1.65
CLPB-211ENST00000542555 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
CLPB-211ENST00000542555 POTEDQ86YR6 584 aa25.16■■□□□ 1.62
CLPB-211ENST00000542555 PIAS4Q8N2W9 510 aaPredicted RBP25.12■■□□□ 1.61
CLPB-211ENST00000542555 PPP6R1Q9UPN7 881 aa24.85■■□□□ 1.57
CLPB-211ENST00000542555 ADRA2BP18089 450 aa24.81■■□□□ 1.56
CLPB-211ENST00000542555 MAPK8IP2Q13387 824 aaPredicted RBP22.86■■□□□ 1.25
CLPB-211ENST00000542555 SCAF1Q9H7N4 1312 aaKnown RBP22.84■■□□□ 1.25
CLPB-211ENST00000542555 DMRT2Q9Y5R5 561 aa22.79■■□□□ 1.24
CLPB-211ENST00000542555 PPP4R3CPQ6ZMV5 832 aa22.09■■□□□ 1.13
CLPB-211ENST00000542555 DCAF8L1A6NGE4 600 aa22.04■■□□□ 1.12
CLPB-211ENST00000542555 CACNB1Q02641 598 aaPredicted RBP21.97■■□□□ 1.11
CLPB-211ENST00000542555 HOXD11P31277 338 aaPredicted RBP21.81■■□□□ 1.08
CLPB-211ENST00000542555 CNKSR2Q8WXI2 1034 aa21.76■■□□□ 1.07
CLPB-211ENST00000542555 RNF216Q9NWF9 866 aaPredicted RBP21.62■■□□□ 1.05
CLPB-211ENST00000542555 RNF39Q9H2S5 420 aa21.53■■□□□ 1.04
CLPB-211ENST00000542555 C1QBPQ07021 282 aaKnown RBP21.26■□□□□ 0.99
CLPB-211ENST00000542555 NCBP3Q53F19 620 aaKnown RBP21.25■□□□□ 0.99
CLPB-211ENST00000542555 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
CLPB-211ENST00000542555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.93■□□□□ 0.94
CLPB-211ENST00000542555 NPM3O75607 178 aaKnown RBP20.81■□□□□ 0.92
CLPB-211ENST00000542555 U3KPZ7 1027 aaPredicted RBP20.31■□□□□ 0.84
CLPB-211ENST00000542555 CAPN15O75808 1086 aa20.23■□□□□ 0.83
CLPB-211ENST00000542555 KCNA4P22459 653 aa20.15■□□□□ 0.82
CLPB-211ENST00000542555 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
CLPB-211ENST00000542555 DSG3P32926 999 aa20.07■□□□□ 0.8
CLPB-211ENST00000542555 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
CLPB-211ENST00000542555 APLP2Q06481 763 aa19.91■□□□□ 0.78
CLPB-211ENST00000542555 SLC4A2P04920 1241 aa19.9■□□□□ 0.78
CLPB-211ENST00000542555 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
CLPB-211ENST00000542555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
CLPB-211ENST00000542555 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
CLPB-211ENST00000542555 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
CLPB-211ENST00000542555 POTEHQ6S545 545 aa19.71■□□□□ 0.75
CLPB-211ENST00000542555 ABCB7O75027 752 aa19.68■□□□□ 0.74
CLPB-211ENST00000542555 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
CLPB-211ENST00000542555 MYCNP04198 464 aaPredicted RBP19.31■□□□□ 0.68
CLPB-211ENST00000542555 RBM42Q9BTD8 480 aaKnown RBP19.26■□□□□ 0.67
CLPB-211ENST00000542555 POLA2Q14181 598 aa19.19■□□□□ 0.66
CLPB-211ENST00000542555 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
CLPB-211ENST00000542555 FOXD4L1Q9NU39 408 aa18.94■□□□□ 0.62
CLPB-211ENST00000542555 CHRDL2Q6WN34 429 aa18.9■□□□□ 0.62
CLPB-211ENST00000542555 ZBTB12Q9Y330 459 aaPredicted RBP18.83■□□□□ 0.6
CLPB-211ENST00000542555 ATF5Q9Y2D1 282 aaPredicted RBP18.79■□□□□ 0.6
CLPB-211ENST00000542555 AKT1S1Q96B36 256 aa18.71■□□□□ 0.59
CLPB-211ENST00000542555 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
CLPB-211ENST00000542555 REM2Q8IYK8 340 aaPredicted RBP18.51■□□□□ 0.55
CLPB-211ENST00000542555 ABCC9O60706 1549 aa18.48■□□□□ 0.55
CLPB-211ENST00000542555 ZBTB22O15209 634 aa18.45■□□□□ 0.54
CLPB-211ENST00000542555 ATXN8OSP0DMR3 200 aa18.39■□□□□ 0.53
CLPB-211ENST00000542555 PIP4P2Q8N4L2 257 aa18.36■□□□□ 0.53
CLPB-211ENST00000542555 SP7Q8TDD2 431 aaPredicted RBP18.33■□□□□ 0.52
CLPB-211ENST00000542555 PITPNM1O00562 1244 aa18.3■□□□□ 0.52
CLPB-211ENST00000542555 FBLN2P98095 1184 aa18.26■□□□□ 0.51
CLPB-211ENST00000542555 HAX1O00165 279 aa18.21■□□□□ 0.51
CLPB-211ENST00000542555 FXR2P51116 673 aaKnown RBP eCLIP18.18■□□□□ 0.5
CLPB-211ENST00000542555 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
CLPB-211ENST00000542555 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
CLPB-211ENST00000542555 SPDYE2Q495Y8 402 aa18.17■□□□□ 0.5
CLPB-211ENST00000542555 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
CLPB-211ENST00000542555 CLEC11AQ9Y240 323 aa17.98■□□□□ 0.47
CLPB-211ENST00000542555 SPDYE1Q8NFV5 336 aaPredicted RBP17.96■□□□□ 0.47
CLPB-211ENST00000542555 ZNF692Q9BU19 519 aaPredicted RBP17.95■□□□□ 0.46
CLPB-211ENST00000542555 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
CLPB-211ENST00000542555 PRKAR2AP13861 404 aaKnown RBP17.88■□□□□ 0.45
CLPB-211ENST00000542555 SSUH2Q9Y2M2 353 aa17.82■□□□□ 0.44
CLPB-211ENST00000542555 EVX2Q03828 476 aa17.79■□□□□ 0.44
CLPB-211ENST00000542555 PABPN1Q86U42 306 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLPB-211ENST00000542555 PRR29P0C7W0 189 aa17.63■□□□□ 0.41
CLPB-211ENST00000542555 C19orf67A6NJJ6 358 aa17.61■□□□□ 0.41
CLPB-211ENST00000542555 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
CLPB-211ENST00000542555 RB1CC1Q8TDY2 1594 aa17.45■□□□□ 0.38
CLPB-211ENST00000542555 GABBR2O75899 941 aa17.45■□□□□ 0.38
CLPB-211ENST00000542555 CSRNP3Q8WYN3 585 aa17.37■□□□□ 0.37
CLPB-211ENST00000542555 CD44P16070 742 aaKnown RBP17.3■□□□□ 0.36
CLPB-211ENST00000542555 FARP1Q9Y4F1 1045 aaPredicted RBP17.3■□□□□ 0.36
CLPB-211ENST00000542555 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
CLPB-211ENST00000542555 NACADO15069 1562 aa17.23■□□□□ 0.35
CLPB-211ENST00000542555 LHX8Q68G74 356 aa17.22■□□□□ 0.35
CLPB-211ENST00000542555 CLCN6P51797 869 aa17.15■□□□□ 0.34
CLPB-211ENST00000542555 STAG3Q9UJ98 1225 aa17.15■□□□□ 0.34
CLPB-211ENST00000542555 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
CLPB-211ENST00000542555 SPDYE4A6NLX3 237 aa17.03■□□□□ 0.32
CLPB-211ENST00000542555 DCBLD2Q96PD2 775 aa17.03■□□□□ 0.32
CLPB-211ENST00000542555 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
CLPB-211ENST00000542555 CREBZFQ9NS37 354 aa17.01■□□□□ 0.31
CLPB-211ENST00000542555 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
CLPB-211ENST00000542555 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
CLPB-211ENST00000542555 PAK3O75914 559 aaPredicted RBP16.91■□□□□ 0.3
CLPB-211ENST00000542555 UNC13AQ9UPW8 1703 aa16.88■□□□□ 0.29
CLPB-211ENST00000542555 NPM1P06748 294 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLPB-211ENST00000542555 MYO15BQ96JP2 1530 aa16.83■□□□□ 0.28
CLPB-211ENST00000542555 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
CLPB-211ENST00000542555 GALR2O43603 387 aaPredicted RBP16.77■□□□□ 0.28
CLPB-211ENST00000542555 PHF12Q96QT6 1004 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms