RNA–Protein interactions for RNA: ENST00000528380.1

KDM2A-209, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-209ENST00000528380 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
KDM2A-209ENST00000528380 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
KDM2A-209ENST00000528380 L3MBTL3Q96JM7 780 aaPredicted RBP12.58□□□□□ -0.4
KDM2A-209ENST00000528380 WIZO95785 1651 aa12.57□□□□□ -0.4
KDM2A-209ENST00000528380 PDCD7Q8N8D1 485 aaKnown RBP12.57□□□□□ -0.4
KDM2A-209ENST00000528380 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
KDM2A-209ENST00000528380 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
KDM2A-209ENST00000528380 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
KDM2A-209ENST00000528380 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
KDM2A-209ENST00000528380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.411e-6■■□□□ 11.6
KDM2A-209ENST00000528380 RSF1Q96T23 1441 aaPredicted RBP12.51□□□□□ -0.41
KDM2A-209ENST00000528380 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
KDM2A-209ENST00000528380 TOP2AP11388 1531 aaKnown RBP12.49□□□□□ -0.41
KDM2A-209ENST00000528380 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
KDM2A-209ENST00000528380 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.42
KDM2A-209ENST00000528380 CEP164Q9UPV0 1460 aa12.43□□□□□ -0.42
KDM2A-209ENST00000528380 WDR62O43379 1518 aa12.42□□□□□ -0.42
KDM2A-209ENST00000528380 CFTRP13569 1480 aa12.42□□□□□ -0.42
KDM2A-209ENST00000528380 DPY19L2Q6NUT2 758 aa12.4□□□□□ -0.42
KDM2A-209ENST00000528380 FANCD2Q9BXW9 1451 aa12.4□□□□□ -0.43
KDM2A-209ENST00000528380 TRIM41Q8WV44 630 aa12.37□□□□□ -0.43
KDM2A-209ENST00000528380 RNF166Q96A37 237 aaPredicted RBP12.37□□□□□ -0.43
KDM2A-209ENST00000528380 G3V3G9 751 aa12.36□□□□□ -0.43
KDM2A-209ENST00000528380 ZNF710Q8N1W2 664 aa12.35□□□□□ -0.43
KDM2A-209ENST00000528380 HOXB3P14651 431 aaPredicted RBP12.34□□□□□ -0.43
KDM2A-209ENST00000528380 ERBB3P21860 1342 aa12.34□□□□□ -0.43
KDM2A-209ENST00000528380 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
KDM2A-209ENST00000528380 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
KDM2A-209ENST00000528380 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-209ENST00000528380 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
KDM2A-209ENST00000528380 EFCAB3Q8N7B9 438 aa12.3□□□□□ -0.44
KDM2A-209ENST00000528380 BOLA1Q9Y3E2 137 aa12.29□□□□□ -0.44
KDM2A-209ENST00000528380 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
KDM2A-209ENST00000528380 MYT1LQ9UL68 1186 aa12.28□□□□□ -0.44
KDM2A-209ENST00000528380 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
KDM2A-209ENST00000528380 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.45
KDM2A-209ENST00000528380 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
KDM2A-209ENST00000528380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.23□□□□□ -0.45
KDM2A-209ENST00000528380 VARS2Q5ST30 1063 aaKnown RBP12.23□□□□□ -0.45
KDM2A-209ENST00000528380 ZFP91Q96JP5 570 aaPredicted RBP12.23□□□□□ -0.45
KDM2A-209ENST00000528380 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
KDM2A-209ENST00000528380 RIMBP2O15034 1052 aa12.21□□□□□ -0.45
KDM2A-209ENST00000528380 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
KDM2A-209ENST00000528380 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
KDM2A-209ENST00000528380 TOPBP1Q92547 1522 aa12.17□□□□□ -0.46
KDM2A-209ENST00000528380 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
KDM2A-209ENST00000528380 SOX12O15370 315 aa12.14□□□□□ -0.47
KDM2A-209ENST00000528380 ZNF687Q8N1G0 1237 aa12.14□□□□□ -0.47
KDM2A-209ENST00000528380 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
KDM2A-209ENST00000528380 PTGER2P43116 358 aa12.12□□□□□ -0.47
KDM2A-209ENST00000528380 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
KDM2A-209ENST00000528380 ECM2O94769 699 aaPredicted RBP12.1□□□□□ -0.47
KDM2A-209ENST00000528380 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
KDM2A-209ENST00000528380 STK24Q9Y6E0 443 aa12.1□□□□□ -0.47
KDM2A-209ENST00000528380 MS4A4AQ96JQ5 239 aa12.09□□□□□ -0.47
KDM2A-209ENST00000528380 ZSWIM6Q9HCJ5 1215 aa12.09□□□□□ -0.47
KDM2A-209ENST00000528380 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
KDM2A-209ENST00000528380 ZNF608Q9ULD9 1512 aaPredicted RBP12.08□□□□□ -0.48
KDM2A-209ENST00000528380 EIF4G3O43432 1585 aaKnown RBP12.07□□□□□ -0.48
KDM2A-209ENST00000528380 STK25O00506 426 aa12.05□□□□□ -0.48
KDM2A-209ENST00000528380 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
KDM2A-209ENST00000528380 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
KDM2A-209ENST00000528380 ANKRD13DQ6ZTN6 518 aa12.04□□□□□ -0.48
KDM2A-209ENST00000528380 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
KDM2A-209ENST00000528380 NLRP6P59044 892 aa12.03□□□□□ -0.48
KDM2A-209ENST00000528380 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
KDM2A-209ENST00000528380 TMEM92Q6UXU6 159 aa12.03□□□□□ -0.48
KDM2A-209ENST00000528380 SOGA1O94964 1423 aa12□□□□□ -0.49
KDM2A-209ENST00000528380 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■□□□ 11.4
KDM2A-209ENST00000528380 FGD5Q6ZNL6 1462 aa11.98□□□□□ -0.49
KDM2A-209ENST00000528380 RGL2O15211 777 aa11.98□□□□□ -0.49
KDM2A-209ENST00000528380 PKD2Q13563 968 aa11.98□□□□□ -0.49
KDM2A-209ENST00000528380 SUPT5HO00267 1087 aaKnown RBP11.97□□□□□ -0.49
KDM2A-209ENST00000528380 CUX1P39880 1505 aa11.96□□□□□ -0.49
KDM2A-209ENST00000528380 RAD54L2Q9Y4B4 1467 aa11.96□□□□□ -0.49
KDM2A-209ENST00000528380 FBXO22Q8NEZ5 403 aa11.96□□□□□ -0.49
KDM2A-209ENST00000528380 MFRPQ9BY79 579 aa11.95□□□□□ -0.5
KDM2A-209ENST00000528380 CHD1O14646 1710 aa11.94□□□□□ -0.5
KDM2A-209ENST00000528380 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
KDM2A-209ENST00000528380 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
KDM2A-209ENST00000528380 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
KDM2A-209ENST00000528380 ARSIQ5FYB1 569 aa11.93□□□□□ -0.5
KDM2A-209ENST00000528380 TDRD9Q8NDG6 1382 aaKnown RBP11.92□□□□□ -0.5
KDM2A-209ENST00000528380 ARHGEF11O15085 1522 aa11.92□□□□□ -0.5
KDM2A-209ENST00000528380 MAGI1Q96QZ7 1491 aaPredicted RBP11.92□□□□□ -0.5
KDM2A-209ENST00000528380 LSM11P83369 360 aaKnown RBP eCLIP11.92□□□□□ -0.5
KDM2A-209ENST00000528380 GRIN2BQ13224 1484 aa11.91□□□□□ -0.5
KDM2A-209ENST00000528380 PLA2G2EQ9NZK7 142 aa11.91□□□□□ -0.5
KDM2A-209ENST00000528380 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
KDM2A-209ENST00000528380 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
KDM2A-209ENST00000528380 ABCA10Q8WWZ4 1543 aa11.88□□□□□ -0.51
KDM2A-209ENST00000528380 SYNJ2O15056 1496 aa11.87□□□□□ -0.51
KDM2A-209ENST00000528380 GAPVD1Q14C86 1478 aa11.87□□□□□ -0.51
KDM2A-209ENST00000528380 SYNJ1O43426 1573 aa11.87□□□□□ -0.51
KDM2A-209ENST00000528380 CHMP7Q8WUX9 453 aaPredicted RBP11.86□□□□□ -0.51
KDM2A-209ENST00000528380 PBRM1Q86U86 1689 aa11.85□□□□□ -0.51
KDM2A-209ENST00000528380 KHSRPQ92945 711 aaKnown RBP eCLIP11.85□□□□□ -0.51
KDM2A-209ENST00000528380 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
KDM2A-209ENST00000528380 WRNQ14191 1432 aaPredicted RBP eCLIP11.85□□□□□ -0.51
KDM2A-209ENST00000528380 BIVM-ERCC5R4GMW8 1640 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms