RNA–Protein interactions for RNA: ENST00000528380.1

KDM2A-209, Transcript of lysine demethylase 2A, humanhuman

TSL 3

Gene KDM2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-209ENST00000528380 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
KDM2A-209ENST00000528380 CHIC1Q5VXU3 224 aa26.42■■□□□ 1.82
KDM2A-209ENST00000528380 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
KDM2A-209ENST00000528380 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
KDM2A-209ENST00000528380 FOXD1Q16676 465 aa22.63■■□□□ 1.21
KDM2A-209ENST00000528380 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
KDM2A-209ENST00000528380 MSH5O43196 834 aa21.46■■□□□ 1.03
KDM2A-209ENST00000528380 PIAS4Q8N2W9 510 aaPredicted RBP21.02■□□□□ 0.96
KDM2A-209ENST00000528380 PLPPR3Q6T4P5 718 aa20.66■□□□□ 0.9
KDM2A-209ENST00000528380 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
KDM2A-209ENST00000528380 ADRA2BP18089 450 aa20.57■□□□□ 0.88
KDM2A-209ENST00000528380 MAPK8IP2Q13387 824 aaPredicted RBP19.08■□□□□ 0.64
KDM2A-209ENST00000528380 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
KDM2A-209ENST00000528380 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
KDM2A-209ENST00000528380 CACNB1Q02641 598 aaPredicted RBP18.83■□□□□ 0.6
KDM2A-209ENST00000528380 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
KDM2A-209ENST00000528380 RNF39Q9H2S5 420 aa18.22■□□□□ 0.51
KDM2A-209ENST00000528380 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
KDM2A-209ENST00000528380 PPP4R3CPQ6ZMV5 832 aa18.01■□□□□ 0.47
KDM2A-209ENST00000528380 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
KDM2A-209ENST00000528380 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
KDM2A-209ENST00000528380 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
KDM2A-209ENST00000528380 DNAJC5BQ9UF47 199 aa17.62■□□□□ 0.41
KDM2A-209ENST00000528380 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
KDM2A-209ENST00000528380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
KDM2A-209ENST00000528380 POTEHQ6S545 545 aa17.15■□□□□ 0.34
KDM2A-209ENST00000528380 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
KDM2A-209ENST00000528380 CAPN15O75808 1086 aa16.85■□□□□ 0.29
KDM2A-209ENST00000528380 DSG3P32926 999 aa16.85■□□□□ 0.29
KDM2A-209ENST00000528380 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
KDM2A-209ENST00000528380 SPINK5Q9NQ38 1064 aaPredicted RBP16.8■□□□□ 0.28
KDM2A-209ENST00000528380 KCNA4P22459 653 aa16.78■□□□□ 0.28
KDM2A-209ENST00000528380 NISCHQ9Y2I1 1504 aa16.57■□□□□ 0.24
KDM2A-209ENST00000528380 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
KDM2A-209ENST00000528380 ABCB7O75027 752 aa16.38■□□□□ 0.21
KDM2A-209ENST00000528380 APLP2Q06481 763 aa16.35■□□□□ 0.21
KDM2A-209ENST00000528380 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
KDM2A-209ENST00000528380 SLC4A2P04920 1241 aa16.27■□□□□ 0.2
KDM2A-209ENST00000528380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
KDM2A-209ENST00000528380 HNRNPUL2Q1KMD3 747 aaKnown RBP16.18■□□□□ 0.18
KDM2A-209ENST00000528380 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
KDM2A-209ENST00000528380 SAMD1Q6SPF0 538 aaPredicted RBP16.04■□□□□ 0.16
KDM2A-209ENST00000528380 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
KDM2A-209ENST00000528380 SLC4A1APQ9BWU0 796 aaKnown RBP15.86■□□□□ 0.13
KDM2A-209ENST00000528380 POLA2Q14181 598 aa15.81■□□□□ 0.12
KDM2A-209ENST00000528380 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
KDM2A-209ENST00000528380 MYCNP04198 464 aaPredicted RBP15.76■□□□□ 0.11
KDM2A-209ENST00000528380 AKT1S1Q96B36 256 aa15.61■□□□□ 0.09
KDM2A-209ENST00000528380 FOXD4L1Q9NU39 408 aa15.61■□□□□ 0.09
KDM2A-209ENST00000528380 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
KDM2A-209ENST00000528380 REM2Q8IYK8 340 aaPredicted RBP15.46■□□□□ 0.07
KDM2A-209ENST00000528380 ATF5Q9Y2D1 282 aaPredicted RBP15.44■□□□□ 0.06
KDM2A-209ENST00000528380 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
KDM2A-209ENST00000528380 HAX1O00165 279 aa15.43■□□□□ 0.06
KDM2A-209ENST00000528380 ZBTB22O15209 634 aa15.39■□□□□ 0.05
KDM2A-209ENST00000528380 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
KDM2A-209ENST00000528380 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
KDM2A-209ENST00000528380 FXR2P51116 673 aaKnown RBP eCLIP15.28■□□□□ 0.04
KDM2A-209ENST00000528380 EVX2Q03828 476 aa15.13■□□□□ 0.01
KDM2A-209ENST00000528380 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
KDM2A-209ENST00000528380 PRKAR2AP13861 404 aaKnown RBP14.91□□□□□ -0.02
KDM2A-209ENST00000528380 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
KDM2A-209ENST00000528380 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
KDM2A-209ENST00000528380 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
KDM2A-209ENST00000528380 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
KDM2A-209ENST00000528380 FBLN2P98095 1184 aa14.86□□□□□ -0.03
KDM2A-209ENST00000528380 CLEC11AQ9Y240 323 aa14.85□□□□□ -0.03
KDM2A-209ENST00000528380 C19orf67A6NJJ6 358 aa14.82□□□□□ -0.04
KDM2A-209ENST00000528380 SPDYE1Q8NFV5 336 aaPredicted RBP14.81□□□□□ -0.04
KDM2A-209ENST00000528380 LHX8Q68G74 356 aa14.8□□□□□ -0.04
KDM2A-209ENST00000528380 GABBR2O75899 941 aa14.78□□□□□ -0.04
KDM2A-209ENST00000528380 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
KDM2A-209ENST00000528380 ABCC9O60706 1549 aa14.71□□□□□ -0.05
KDM2A-209ENST00000528380 MKRN4PQ13434 485 aaPredicted RBP14.69□□□□□ -0.06
KDM2A-209ENST00000528380 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
KDM2A-209ENST00000528380 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
KDM2A-209ENST00000528380 CHADLQ6NUI6 762 aa14.6□□□□□ -0.07
KDM2A-209ENST00000528380 SSUH2Q9Y2M2 353 aa14.6□□□□□ -0.07
KDM2A-209ENST00000528380 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
KDM2A-209ENST00000528380 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
KDM2A-209ENST00000528380 PLSCR2Q9NRY7 297 aa14.42□□□□□ -0.1
KDM2A-209ENST00000528380 CD44P16070 742 aaKnown RBP14.4□□□□□ -0.1
KDM2A-209ENST00000528380 PABPN1Q86U42 306 aaKnown RBP eCLIP14.39□□□□□ -0.11
KDM2A-209ENST00000528380 CLCN6P51797 869 aa14.34□□□□□ -0.11
KDM2A-209ENST00000528380 FARP1Q9Y4F1 1045 aaPredicted RBP14.32□□□□□ -0.12
KDM2A-209ENST00000528380 DCBLD2Q96PD2 775 aa14.28□□□□□ -0.12
KDM2A-209ENST00000528380 ZNF579Q8NAF0 562 aaKnown RBP14.13□□□□□ -0.15
KDM2A-209ENST00000528380 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
KDM2A-209ENST00000528380 ZRANB1Q9UGI0 708 aa14.11□□□□□ -0.15
KDM2A-209ENST00000528380 SPDYE4A6NLX3 237 aa14.07□□□□□ -0.16
KDM2A-209ENST00000528380 NACADO15069 1562 aa14.05□□□□□ -0.16
KDM2A-209ENST00000528380 OTUD5Q96G74 571 aa14.04□□□□□ -0.16
KDM2A-209ENST00000528380 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
KDM2A-209ENST00000528380 POTEMA6NI47 508 aa13.96□□□□□ -0.17
KDM2A-209ENST00000528380 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
KDM2A-209ENST00000528380 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
KDM2A-209ENST00000528380 STAG3Q9UJ98 1225 aa13.93□□□□□ -0.18
KDM2A-209ENST00000528380 MYO15BQ96JP2 1530 aa13.92□□□□□ -0.18
KDM2A-209ENST00000528380 POTEGQ6S5H5 508 aa13.9□□□□□ -0.18
KDM2A-209ENST00000528380 PAK3O75914 559 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms