RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 OCEL1Q9H607 264 aa14.52□□□□□ -0.09
PVT1-213ENST00000522414 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
PVT1-213ENST00000522414 WDR97A6NE52 1622 aa14.5□□□□□ -0.09
PVT1-213ENST00000522414 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
PVT1-213ENST00000522414 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
PVT1-213ENST00000522414 SOGA1O94964 1423 aa14.47□□□□□ -0.09
PVT1-213ENST00000522414 CYB5RLQ6IPT4 315 aa14.44□□□□□ -0.1
PVT1-213ENST00000522414 CUX1P39880 1505 aa14.43□□□□□ -0.1
PVT1-213ENST00000522414 FGD5Q6ZNL6 1462 aa14.4□□□□□ -0.1
PVT1-213ENST00000522414 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
PVT1-213ENST00000522414 RIMBP3CA6NJZ7 1639 aa14.4□□□□□ -0.1
PVT1-213ENST00000522414 RIMBP3BA6NNM3 1639 aa14.4□□□□□ -0.1
PVT1-213ENST00000522414 RIMBP3Q9UFD9 1639 aa14.4□□□□□ -0.1
PVT1-213ENST00000522414 CHD1O14646 1710 aa14.39□□□□□ -0.11
PVT1-213ENST00000522414 FBXO3Q9UK99 471 aa14.39□□□□□ -0.11
PVT1-213ENST00000522414 ARHGEF11O15085 1522 aa14.37□□□□□ -0.11
PVT1-213ENST00000522414 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.37□□□□□ -0.11
PVT1-213ENST00000522414 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
PVT1-213ENST00000522414 VASPP50552 380 aaPredicted RBP14.33□□□□□ -0.12
PVT1-213ENST00000522414 MARVELD3Q96A59 401 aa14.33□□□□□ -0.12
PVT1-213ENST00000522414 TMEM121BQ9BXQ6 578 aaPredicted RBP14.33□□□□□ -0.12
PVT1-213ENST00000522414 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
PVT1-213ENST00000522414 ABCA5Q8WWZ7 1642 aa14.31□□□□□ -0.12
PVT1-213ENST00000522414 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
PVT1-213ENST00000522414 SNAPC4Q5SXM2 1469 aa14.31□□□□□ -0.12
PVT1-213ENST00000522414 ABCA10Q8WWZ4 1543 aa14.31□□□□□ -0.12
PVT1-213ENST00000522414 GSE1Q14687 1217 aa14.3□□□□□ -0.12
PVT1-213ENST00000522414 ZNF467Q7Z7K2 595 aaPredicted RBP14.3□□□□□ -0.12
PVT1-213ENST00000522414 CLASP1Q7Z460 1538 aa14.3□□□□□ -0.12
PVT1-213ENST00000522414 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
PVT1-213ENST00000522414 SNPHO15079 494 aa14.29□□□□□ -0.12
PVT1-213ENST00000522414 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
PVT1-213ENST00000522414 CHRM1P11229 460 aaPredicted RBP14.28□□□□□ -0.12
PVT1-213ENST00000522414 PBRM1Q86U86 1689 aa14.27□□□□□ -0.12
PVT1-213ENST00000522414 SPNS2Q8IVW8 549 aa14.27□□□□□ -0.13
PVT1-213ENST00000522414 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
PVT1-213ENST00000522414 PSEN1P49768 467 aa14.25□□□□□ -0.13
PVT1-213ENST00000522414 MKRN3Q13064 507 aaKnown RBP14.25□□□□□ -0.13
PVT1-213ENST00000522414 MMRN1Q13201 1228 aa14.25□□□□□ -0.13
PVT1-213ENST00000522414 SYNJ2O15056 1496 aa14.25□□□□□ -0.13
PVT1-213ENST00000522414 GAPVD1Q14C86 1478 aa14.25□□□□□ -0.13
PVT1-213ENST00000522414 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
PVT1-213ENST00000522414 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
PVT1-213ENST00000522414 GOLGA2Q08379 1002 aa14.22□□□□□ -0.13
PVT1-213ENST00000522414 C3orf67Q6ZVT6 689 aa14.22□□□□□ -0.13
PVT1-213ENST00000522414 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.22□□□□□ -0.13
PVT1-213ENST00000522414 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
PVT1-213ENST00000522414 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
PVT1-213ENST00000522414 WRNQ14191 1432 aaPredicted RBP eCLIP14.19□□□□□ -0.14
PVT1-213ENST00000522414 POTEB3A0JP26 581 aa14.18□□□□□ -0.14
PVT1-213ENST00000522414 DPY19L2Q6NUT2 758 aa14.18□□□□□ -0.14
PVT1-213ENST00000522414 POTEBQ6S5H4 581 aa14.18□□□□□ -0.14
PVT1-213ENST00000522414 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
PVT1-213ENST00000522414 EMP3P54852 163 aa14.14□□□□□ -0.15
PVT1-213ENST00000522414 ERICH3Q5RHP9 1530 aa14.13□□□□□ -0.15
PVT1-213ENST00000522414 PDAP1Q13442 181 aaKnown RBP14.12□□□□□ -0.15
PVT1-213ENST00000522414 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
PVT1-213ENST00000522414 NUP160Q12769 1436 aa14.11□□□□□ -0.15
PVT1-213ENST00000522414 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
PVT1-213ENST00000522414 KRTAP3-3Q9BYR6 98 aa14.09□□□□□ -0.15
PVT1-213ENST00000522414 KRTAP3-2Q9BYR7 98 aa14.09□□□□□ -0.15
PVT1-213ENST00000522414 SHROOM2Q13796 1616 aa14.08□□□□□ -0.15
PVT1-213ENST00000522414 HS3ST6Q96QI5 342 aa14.08□□□□□ -0.16
PVT1-213ENST00000522414 CABP2Q9NPB3 220 aa14.08□□□□□ -0.16
PVT1-213ENST00000522414 CEP170Q5SW79 1584 aa14.08□□□□□ -0.16
PVT1-213ENST00000522414 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
PVT1-213ENST00000522414 FAM205CA6NFA0 338 aa14.06□□□□□ -0.16
PVT1-213ENST00000522414 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
PVT1-213ENST00000522414 SPOCK2Q92563 424 aa14.04□□□□□ -0.16
PVT1-213ENST00000522414 CIZ1Q9ULV3 898 aaPredicted RBP14.04□□□□□ -0.16
PVT1-213ENST00000522414 HOXB3P14651 431 aaPredicted RBP14.03□□□□□ -0.16
PVT1-213ENST00000522414 JPH4Q96JJ6 628 aa14.02□□□□□ -0.17
PVT1-213ENST00000522414 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.17
PVT1-213ENST00000522414 RUSC2Q8N2Y8 1516 aa13.98□□□□□ -0.17
PVT1-213ENST00000522414 IGF1RP08069 1367 aa13.96□□□□□ -0.17
PVT1-213ENST00000522414 PRG4Q92954 1404 aaPredicted RBP13.96□□□□□ -0.18
PVT1-213ENST00000522414 CUL7Q14999 1698 aa13.95□□□□□ -0.18
PVT1-213ENST00000522414 G3V3G9 751 aa13.91□□□□□ -0.18
PVT1-213ENST00000522414 EFCAB3Q8N7B9 438 aa13.9□□□□□ -0.18
PVT1-213ENST00000522414 KIF27Q86VH2 1401 aa13.9□□□□□ -0.19
PVT1-213ENST00000522414 HOXB1P14653 301 aaPredicted RBP13.89□□□□□ -0.19
PVT1-213ENST00000522414 KIAA0586Q9BVV6 1533 aa13.86□□□□□ -0.19
PVT1-213ENST00000522414 TTBK1Q5TCY1 1321 aaPredicted RBP13.86□□□□□ -0.19
PVT1-213ENST00000522414 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
PVT1-213ENST00000522414 TMEM92Q6UXU6 159 aa13.84□□□□□ -0.19
PVT1-213ENST00000522414 ZNF710Q8N1W2 664 aa13.84□□□□□ -0.19
PVT1-213ENST00000522414 FAM69CQ0P6D2 419 aa13.82□□□□□ -0.2
PVT1-213ENST00000522414 DOK7Q18PE1 504 aa13.82□□□□□ -0.2
PVT1-213ENST00000522414 ERBB3P21860 1342 aa13.8□□□□□ -0.2
PVT1-213ENST00000522414 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
PVT1-213ENST00000522414 KIF13AQ9H1H9 1805 aa13.78□□□□□ -0.2
PVT1-213ENST00000522414 MICALL2Q8IY33 904 aa13.78□□□□□ -0.2
PVT1-213ENST00000522414 ADCY10Q96PN6 1610 aa13.77□□□□□ -0.21
PVT1-213ENST00000522414 PTPRGP23470 1445 aa13.76□□□□□ -0.21
PVT1-213ENST00000522414 MS4A4AQ96JQ5 239 aa13.76□□□□□ -0.21
PVT1-213ENST00000522414 RNF25Q96BH1 459 aaPredicted RBP13.75□□□□□ -0.21
PVT1-213ENST00000522414 VARS2Q5ST30 1063 aaKnown RBP13.74□□□□□ -0.21
PVT1-213ENST00000522414 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
PVT1-213ENST00000522414 ABCC10Q5T3U5 1492 aa13.72□□□□□ -0.21
PVT1-213ENST00000522414 DIP2BQ9P265 1576 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms