RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 MS4A1P11836 297 aa15.96■□□□□ 0.14
SPIDR-217ENST00000522117 PRDM4Q9UKN5 801 aa15.96■□□□□ 0.14
SPIDR-217ENST00000522117 FRAT2O75474 233 aaPredicted RBP15.94■□□□□ 0.14
SPIDR-217ENST00000522117 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
SPIDR-217ENST00000522117 RAD54L2Q9Y4B4 1467 aa15.92■□□□□ 0.14
SPIDR-217ENST00000522117 SLC4A3P48751 1232 aa15.92■□□□□ 0.14
SPIDR-217ENST00000522117 PNNQ9H307 717 aaKnown RBP15.92■□□□□ 0.14
SPIDR-217ENST00000522117 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
SPIDR-217ENST00000522117 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
SPIDR-217ENST00000522117 CLCN1P35523 988 aa15.9■□□□□ 0.14
SPIDR-217ENST00000522117 MRS2Q9HD23 443 aa15.9■□□□□ 0.14
SPIDR-217ENST00000522117 RSPH4AQ5TD94 716 aa15.89■□□□□ 0.13
SPIDR-217ENST00000522117 NCOA2Q15596 1464 aa15.89■□□□□ 0.13
SPIDR-217ENST00000522117 CALD1Q05682 793 aaKnown RBP15.89■□□□□ 0.13
SPIDR-217ENST00000522117 PRKRIP1Q9H875 184 aaPredicted RBP15.88■□□□□ 0.13
SPIDR-217ENST00000522117 CENPJQ9HC77 1338 aaPredicted RBP15.88■□□□□ 0.13
SPIDR-217ENST00000522117 FHAD1B1AJZ9 1412 aa15.88■□□□□ 0.13
SPIDR-217ENST00000522117 URB2Q14146 1524 aaKnown RBP15.88■□□□□ 0.13
SPIDR-217ENST00000522117 CNTLNQ9NXG0 1405 aa15.87■□□□□ 0.13
SPIDR-217ENST00000522117 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
SPIDR-217ENST00000522117 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
SPIDR-217ENST00000522117 TOPBP1Q92547 1522 aa15.85■□□□□ 0.13
SPIDR-217ENST00000522117 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
SPIDR-217ENST00000522117 POGKQ9P215 609 aa15.83■□□□□ 0.12
SPIDR-217ENST00000522117 TONSLQ96HA7 1378 aa15.83■□□□□ 0.12
SPIDR-217ENST00000522117 POLA1P09884 1462 aaPredicted RBP15.82■□□□□ 0.12
SPIDR-217ENST00000522117 RGS3P49796 1198 aa15.82■□□□□ 0.12
SPIDR-217ENST00000522117 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
SPIDR-217ENST00000522117 AMER1Q5JTC6 1135 aaPredicted RBP15.81■□□□□ 0.12
SPIDR-217ENST00000522117 L1TD1Q5T7N2 865 aaKnown RBP15.81■□□□□ 0.12
SPIDR-217ENST00000522117 EXOC6Q8TAG9 804 aa15.81■□□□□ 0.12
SPIDR-217ENST00000522117 PDCL3Q9H2J4 239 aa15.81■□□□□ 0.12
SPIDR-217ENST00000522117 TAOK2Q9UL54 1235 aa15.81■□□□□ 0.12
SPIDR-217ENST00000522117 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
SPIDR-217ENST00000522117 KDM5BQ9UGL1 1544 aa15.8■□□□□ 0.12
SPIDR-217ENST00000522117 IGF1RP08069 1367 aa15.79■□□□□ 0.12
SPIDR-217ENST00000522117 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
SPIDR-217ENST00000522117 NAP1L2Q9ULW6 460 aaPredicted RBP15.78■□□□□ 0.12
SPIDR-217ENST00000522117 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
SPIDR-217ENST00000522117 ZNF326Q5BKZ1 582 aaKnown RBP15.75■□□□□ 0.11
SPIDR-217ENST00000522117 RRP1P56182 461 aaKnown RBP15.74■□□□□ 0.11
SPIDR-217ENST00000522117 SKAP1Q86WV1 359 aa15.74■□□□□ 0.11
SPIDR-217ENST00000522117 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.11
SPIDR-217ENST00000522117 TPM2P07951 284 aa15.71■□□□□ 0.11
SPIDR-217ENST00000522117 CHMP4BQ9H444 224 aaKnown RBP15.71■□□□□ 0.11
SPIDR-217ENST00000522117 ARID4BQ4LE39 1312 aaPredicted RBP15.69■□□□□ 0.1
SPIDR-217ENST00000522117 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
SPIDR-217ENST00000522117 CCDC7Q96M83 1385 aa15.69■□□□□ 0.1
SPIDR-217ENST00000522117 FSD2A1L4K1 749 aa15.68■□□□□ 0.1
SPIDR-217ENST00000522117 PANK2Q9BZ23 570 aa15.68■□□□□ 0.1
SPIDR-217ENST00000522117 NCOA1Q15788 1441 aa15.68■□□□□ 0.1
SPIDR-217ENST00000522117 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
SPIDR-217ENST00000522117 CUL7Q14999 1698 aa15.66■□□□□ 0.1
SPIDR-217ENST00000522117 AQRO60306 1485 aaKnown RBP eCLIP15.66■□□□□ 0.1
SPIDR-217ENST00000522117 MAP3K1Q13233 1512 aa15.66■□□□□ 0.1
SPIDR-217ENST00000522117 CNKSR2Q8WXI2 1034 aa15.65■□□□□ 0.1
SPIDR-217ENST00000522117 ERBB4Q15303 1308 aa15.65■□□□□ 0.1
SPIDR-217ENST00000522117 PHLDB1Q86UU1 1377 aa15.65■□□□□ 0.1
SPIDR-217ENST00000522117 ERCC6Q03468 1493 aa15.64■□□□□ 0.09
SPIDR-217ENST00000522117 SENP3-EIF4A1A0A087X0R7 540 aa15.64■□□□□ 0.09
SPIDR-217ENST00000522117 EIF4G2P78344 907 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■■■□□ 18.8
SPIDR-217ENST00000522117 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
SPIDR-217ENST00000522117 C8orf34Q49A92 452 aa15.63■□□□□ 0.09
SPIDR-217ENST00000522117 GOLGA6L3A6NEY3 463 aa15.62■□□□□ 0.09
SPIDR-217ENST00000522117 ESPNB1AK53 854 aa15.62■□□□□ 0.09
SPIDR-217ENST00000522117 FAM50AQ14320 339 aaKnown RBP15.62■□□□□ 0.09
SPIDR-217ENST00000522117 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-217ENST00000522117 GTF2E1P29083 439 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-217ENST00000522117 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
SPIDR-217ENST00000522117 BBXQ8WY36 941 aaPredicted RBP15.62■□□□□ 0.09
SPIDR-217ENST00000522117 TIAM1Q13009 1591 aa15.61■□□□□ 0.09
SPIDR-217ENST00000522117 MRC2Q9UBG0 1479 aa15.61■□□□□ 0.09
SPIDR-217ENST00000522117 CTTNBP2Q8WZ74 1663 aa15.61■□□□□ 0.09
SPIDR-217ENST00000522117 ABCA5Q8WWZ7 1642 aa15.6■□□□□ 0.09
SPIDR-217ENST00000522117 ARHGAP35Q9NRY4 1499 aa15.6■□□□□ 0.09
SPIDR-217ENST00000522117 FAM161AQ3B820 660 aa15.59■□□□□ 0.09
SPIDR-217ENST00000522117 RCAN3Q9UKA8 241 aa15.59■□□□□ 0.09
SPIDR-217ENST00000522117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.59■□□□□ 0.09
SPIDR-217ENST00000522117 SMAP1Q8IYB5 467 aaPredicted RBP15.58■□□□□ 0.08
SPIDR-217ENST00000522117 ZFP91Q96JP5 570 aaPredicted RBP15.58■□□□□ 0.08
SPIDR-217ENST00000522117 TARBP1Q13395 1621 aaKnown RBP15.57■□□□□ 0.08
SPIDR-217ENST00000522117 GAPVD1Q14C86 1478 aa15.56■□□□□ 0.08
SPIDR-217ENST00000522117 RIPK4P57078 832 aa15.56■□□□□ 0.08
SPIDR-217ENST00000522117 STAC3Q96MF2 364 aa15.56■□□□□ 0.08
SPIDR-217ENST00000522117 LRRC9Q6ZRR7 1453 aa15.56■□□□□ 0.08
SPIDR-217ENST00000522117 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
SPIDR-217ENST00000522117 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
SPIDR-217ENST00000522117 KIAA1211Q6ZU35 1233 aa15.54■□□□□ 0.08
SPIDR-217ENST00000522117 KDM2BQ8NHM5 1336 aa15.54■□□□□ 0.08
SPIDR-217ENST00000522117 DHX29Q7Z478 1369 aaKnown RBP15.54■□□□□ 0.08
SPIDR-217ENST00000522117 IPO4Q8TEX9 1081 aaKnown RBP15.53■□□□□ 0.08
SPIDR-217ENST00000522117 ZHX1Q9UKY1 873 aaPredicted RBP15.53■□□□□ 0.08
SPIDR-217ENST00000522117 KIF7Q2M1P5 1343 aa15.53■□□□□ 0.08
SPIDR-217ENST00000522117 CCDC18Q5T9S5 1454 aa15.53■□□□□ 0.08
SPIDR-217ENST00000522117 CDK11BP21127 795 aaKnown RBP15.53■□□□□ 0.08
SPIDR-217ENST00000522117 KTN1Q86UP2 1357 aaKnown RBP15.52■□□□□ 0.08
SPIDR-217ENST00000522117 MYOM3Q5VTT5 1437 aa15.52■□□□□ 0.08
SPIDR-217ENST00000522117 MRE11P49959 708 aa15.51■□□□□ 0.07
SPIDR-217ENST00000522117 CRBNQ96SW2 442 aa15.51■□□□□ 0.07
SPIDR-217ENST00000522117 ANTXR1Q9H6X2 564 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms