RNA–Protein interactions for RNA: ENST00000518985.1

PCM1-211, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 382 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-211ENST00000518985 WDR97A6NE52 1622 aa12.16□□□□□ -0.46
PCM1-211ENST00000518985 SYNJ1O43426 1573 aa12.15□□□□□ -0.46
PCM1-211ENST00000518985 SOGA1O94964 1423 aa12.15□□□□□ -0.46
PCM1-211ENST00000518985 BIVM-ERCC5R4GMW8 1640 aa12.14□□□□□ -0.47
PCM1-211ENST00000518985 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.471e-12■■□□□ 12.5
PCM1-211ENST00000518985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.13□□□□□ -0.47
PCM1-211ENST00000518985 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
PCM1-211ENST00000518985 LMOD2Q6P5Q4 547 aa12.12□□□□□ -0.47
PCM1-211ENST00000518985 FBXO22Q8NEZ5 403 aa12.12□□□□□ -0.47
PCM1-211ENST00000518985 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
PCM1-211ENST00000518985 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
PCM1-211ENST00000518985 IFNL1Q8IU54 200 aa12.11□□□□□ -0.47
PCM1-211ENST00000518985 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
PCM1-211ENST00000518985 SOX12O15370 315 aa12.1□□□□□ -0.47
PCM1-211ENST00000518985 NLRP6P59044 892 aa12.1□□□□□ -0.47
PCM1-211ENST00000518985 PPP1R37O75864 691 aa12.09□□□□□ -0.47
PCM1-211ENST00000518985 ARHGEF1Q92888 912 aaKnown RBP12.09□□□□□ -0.47
PCM1-211ENST00000518985 ABCA10Q8WWZ4 1543 aa12.08□□□□□ -0.48
PCM1-211ENST00000518985 EFCAB3Q8N7B9 438 aa12.08□□□□□ -0.48
PCM1-211ENST00000518985 KIF12Q96FN5 646 aa12.08□□□□□ -0.48
PCM1-211ENST00000518985 MAP3K13O43283 966 aa12.07□□□□□ -0.48
PCM1-211ENST00000518985 TMEM132AQ24JP5 1023 aa12.07□□□□□ -0.48
PCM1-211ENST00000518985 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
PCM1-211ENST00000518985 CHD1O14646 1710 aa12.06□□□□□ -0.48
PCM1-211ENST00000518985 CABP2Q9NPB3 220 aa12.06□□□□□ -0.48
PCM1-211ENST00000518985 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
PCM1-211ENST00000518985 GTF3C3Q9Y5Q9 886 aa12.05□□□□□ -0.48
PCM1-211ENST00000518985 TULP1O00294 542 aaPredicted RBP12.04□□□□□ -0.48
PCM1-211ENST00000518985 E2F4Q16254 413 aa12.04□□□□□ -0.48
PCM1-211ENST00000518985 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
PCM1-211ENST00000518985 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.48
PCM1-211ENST00000518985 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
PCM1-211ENST00000518985 GRIN2BQ13224 1484 aa12.02□□□□□ -0.49
PCM1-211ENST00000518985 GAPVD1Q14C86 1478 aa12.02□□□□□ -0.49
PCM1-211ENST00000518985 MAGI1Q96QZ7 1491 aaPredicted RBP11.99□□□□□ -0.49
PCM1-211ENST00000518985 NCKAP5LQ9HCH0 1330 aa11.96□□□□□ -0.49
PCM1-211ENST00000518985 TESPA1A2RU30 521 aaPredicted RBP11.96□□□□□ -0.49
PCM1-211ENST00000518985 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
PCM1-211ENST00000518985 SYNJ2O15056 1496 aa11.95□□□□□ -0.5
PCM1-211ENST00000518985 PIP4P2Q8N4L2 257 aa11.95□□□□□ -0.5
PCM1-211ENST00000518985 MFSD10Q14728 455 aa11.94□□□□□ -0.5
PCM1-211ENST00000518985 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
PCM1-211ENST00000518985 ADAMTS12P58397 1594 aa11.93□□□□□ -0.5
PCM1-211ENST00000518985 SEMA3EO15041 775 aa11.93□□□□□ -0.5
PCM1-211ENST00000518985 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
PCM1-211ENST00000518985 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
PCM1-211ENST00000518985 RIMBP3CA6NJZ7 1639 aa11.93□□□□□ -0.5
PCM1-211ENST00000518985 RIMBP3BA6NNM3 1639 aa11.93□□□□□ -0.5
PCM1-211ENST00000518985 RIMBP3Q9UFD9 1639 aa11.93□□□□□ -0.5
PCM1-211ENST00000518985 PDE4AP27815 886 aa11.92□□□□□ -0.5
PCM1-211ENST00000518985 CHRDL2Q6WN34 429 aa11.92□□□□□ -0.5
PCM1-211ENST00000518985 ERICH3Q5RHP9 1530 aa11.91□□□□□ -0.5
PCM1-211ENST00000518985 CRISPLD2Q9H0B8 497 aa11.91□□□□□ -0.5
PCM1-211ENST00000518985 ARIH1Q9Y4X5 557 aaPredicted RBP11.91□□□□□ -0.5
PCM1-211ENST00000518985 ARHGEF11O15085 1522 aa11.91□□□□□ -0.5
PCM1-211ENST00000518985 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
PCM1-211ENST00000518985 BRPF1P55201 1214 aaPredicted RBP11.89□□□□□ -0.51
PCM1-211ENST00000518985 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
PCM1-211ENST00000518985 GRIN2AQ12879 1464 aa11.89□□□□□ -0.51
PCM1-211ENST00000518985 CHMP7Q8WUX9 453 aaPredicted RBP11.88□□□□□ -0.51
PCM1-211ENST00000518985 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
PCM1-211ENST00000518985 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
PCM1-211ENST00000518985 NUP160Q12769 1436 aa11.86□□□□□ -0.51
PCM1-211ENST00000518985 CD44P16070 742 aaKnown RBP11.86□□□□□ -0.51
PCM1-211ENST00000518985 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
PCM1-211ENST00000518985 IGF1RP08069 1367 aa11.86□□□□□ -0.51
PCM1-211ENST00000518985 DDX27Q96GQ7 796 aaKnown RBP11.85□□□□□ -0.51
PCM1-211ENST00000518985 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
PCM1-211ENST00000518985 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
PCM1-211ENST00000518985 SMYD5Q6GMV2 418 aa11.84□□□□□ -0.51
PCM1-211ENST00000518985 ARAP1Q96P48 1450 aa11.83□□□□□ -0.52
PCM1-211ENST00000518985 TMEM106CQ9BVX2 250 aa11.83□□□□□ -0.52
PCM1-211ENST00000518985 RUSC2Q8N2Y8 1516 aa11.82□□□□□ -0.52
PCM1-211ENST00000518985 KIF27Q86VH2 1401 aa11.82□□□□□ -0.52
PCM1-211ENST00000518985 ERCC6L2Q5T890 1561 aa11.8□□□□□ -0.52
PCM1-211ENST00000518985 SHROOM2Q13796 1616 aa11.8□□□□□ -0.52
PCM1-211ENST00000518985 ZMYND10O75800 440 aa11.8□□□□□ -0.52
PCM1-211ENST00000518985 SLC24A3Q9HC58 644 aa11.8□□□□□ -0.52
PCM1-211ENST00000518985 CUL7Q14999 1698 aa11.78□□□□□ -0.52
PCM1-211ENST00000518985 MKRN3Q13064 507 aaKnown RBP11.78□□□□□ -0.52
PCM1-211ENST00000518985 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
PCM1-211ENST00000518985 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
PCM1-211ENST00000518985 TRPC6Q9Y210 931 aa11.77□□□□□ -0.53
PCM1-211ENST00000518985 MS4A3Q96HJ5 214 aa11.76□□□□□ -0.53
PCM1-211ENST00000518985 CYB5RLQ6IPT4 315 aa11.74□□□□□ -0.53
PCM1-211ENST00000518985 CARMIL1Q5VZK9 1371 aa11.74□□□□□ -0.53
PCM1-211ENST00000518985 TIE1P35590 1138 aa11.72□□□□□ -0.53
PCM1-211ENST00000518985 BARGINQ6ZT62 677 aa11.72□□□□□ -0.53
PCM1-211ENST00000518985 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.53
PCM1-211ENST00000518985 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.53
PCM1-211ENST00000518985 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
PCM1-211ENST00000518985 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
PCM1-211ENST00000518985 C19orf67A6NJJ6 358 aa11.68□□□□□ -0.54
PCM1-211ENST00000518985 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
PCM1-211ENST00000518985 JPH4Q96JJ6 628 aa11.68□□□□□ -0.54
PCM1-211ENST00000518985 PRG4Q92954 1404 aaPredicted RBP11.68□□□□□ -0.54
PCM1-211ENST00000518985 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.67□□□□□ -0.542e-11■■□□□ 14.1
PCM1-211ENST00000518985 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
PCM1-211ENST00000518985 RAPGEF2Q9Y4G8 1499 aa11.66□□□□□ -0.54
PCM1-211ENST00000518985 MLLT3P42568 568 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms