RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
HMGN1P17-201ENST00000513734 GOLGA2Q08379 1002 aa11.79□□□□□ -0.52
HMGN1P17-201ENST00000513734 PPP1R37O75864 691 aa11.78□□□□□ -0.52
HMGN1P17-201ENST00000513734 CADPS2Q86UW7 1296 aa11.78□□□□□ -0.52
HMGN1P17-201ENST00000513734 NBR1Q14596 966 aa11.75□□□□□ -0.53
HMGN1P17-201ENST00000513734 EVX2Q03828 476 aa11.73□□□□□ -0.53
HMGN1P17-201ENST00000513734 MKRN3Q13064 507 aaKnown RBP11.73□□□□□ -0.53
HMGN1P17-201ENST00000513734 GALR2O43603 387 aaPredicted RBP11.72□□□□□ -0.53
HMGN1P17-201ENST00000513734 TIE1P35590 1138 aa11.72□□□□□ -0.53
HMGN1P17-201ENST00000513734 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
HMGN1P17-201ENST00000513734 WDR70Q9NW82 654 aa11.71□□□□□ -0.53
HMGN1P17-201ENST00000513734 MS4A4AQ96JQ5 239 aa11.7□□□□□ -0.54
HMGN1P17-201ENST00000513734 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
HMGN1P17-201ENST00000513734 PRKCSHP14314 528 aaPredicted RBP11.68□□□□□ -0.54
HMGN1P17-201ENST00000513734 TOPBP1Q92547 1522 aa11.68□□□□□ -0.54
HMGN1P17-201ENST00000513734 ZNF608Q9ULD9 1512 aaPredicted RBP11.66□□□□□ -0.54
HMGN1P17-201ENST00000513734 DNMBPQ6XZF7 1577 aa11.65□□□□□ -0.54
HMGN1P17-201ENST00000513734 CLCN6P51797 869 aa11.64□□□□□ -0.55
HMGN1P17-201ENST00000513734 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
HMGN1P17-201ENST00000513734 EIF4G3O43432 1585 aaKnown RBP11.63□□□□□ -0.55
HMGN1P17-201ENST00000513734 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
HMGN1P17-201ENST00000513734 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
HMGN1P17-201ENST00000513734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.63□□□□□ -0.55
HMGN1P17-201ENST00000513734 TARBP1Q13395 1621 aaKnown RBP11.61□□□□□ -0.55
HMGN1P17-201ENST00000513734 IFT140Q96RY7 1462 aa11.6□□□□□ -0.55
HMGN1P17-201ENST00000513734 KCNV2Q8TDN2 545 aa11.59□□□□□ -0.55
HMGN1P17-201ENST00000513734 CHD1O14646 1710 aa11.59□□□□□ -0.55
HMGN1P17-201ENST00000513734 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
HMGN1P17-201ENST00000513734 ATN1P54259 1190 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P17-201ENST00000513734 ILDR1Q86SU0 546 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P17-201ENST00000513734 NCKAP5LQ9HCH0 1330 aa11.56□□□□□ -0.56
HMGN1P17-201ENST00000513734 CUX1P39880 1505 aa11.55□□□□□ -0.56
HMGN1P17-201ENST00000513734 ABCC8Q09428 1581 aa11.55□□□□□ -0.56
HMGN1P17-201ENST00000513734 PDE4AP27815 886 aa11.55□□□□□ -0.56
HMGN1P17-201ENST00000513734 LARP6Q9BRS8 491 aaKnown RBP11.55□□□□□ -0.56
HMGN1P17-201ENST00000513734 SUPT5HO00267 1087 aaKnown RBP11.54□□□□□ -0.56
HMGN1P17-201ENST00000513734 ATMINO43313 823 aaPredicted RBP11.54□□□□□ -0.56
HMGN1P17-201ENST00000513734 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
HMGN1P17-201ENST00000513734 E2F4Q16254 413 aa11.53□□□□□ -0.56
HMGN1P17-201ENST00000513734 DPY19L2Q6NUT2 758 aa11.53□□□□□ -0.56
HMGN1P17-201ENST00000513734 WDR97A6NE52 1622 aa11.53□□□□□ -0.56
HMGN1P17-201ENST00000513734 AQRO60306 1485 aaKnown RBP eCLIP11.52□□□□□ -0.56
HMGN1P17-201ENST00000513734 FGD5Q6ZNL6 1462 aa11.51□□□□□ -0.57
HMGN1P17-201ENST00000513734 RIMBP3CA6NJZ7 1639 aa11.51□□□□□ -0.57
HMGN1P17-201ENST00000513734 RIMBP3BA6NNM3 1639 aa11.51□□□□□ -0.57
HMGN1P17-201ENST00000513734 RIMBP3Q9UFD9 1639 aa11.51□□□□□ -0.57
HMGN1P17-201ENST00000513734 GABBR2O75899 941 aa11.51□□□□□ -0.57
HMGN1P17-201ENST00000513734 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
HMGN1P17-201ENST00000513734 CRISPLD2Q9H0B8 497 aa11.5□□□□□ -0.57
HMGN1P17-201ENST00000513734 DDX27Q96GQ7 796 aaKnown RBP11.48□□□□□ -0.57
HMGN1P17-201ENST00000513734 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
HMGN1P17-201ENST00000513734 IRX5P78411 483 aaPredicted RBP11.47□□□□□ -0.57
HMGN1P17-201ENST00000513734 MFSD10Q14728 455 aa11.47□□□□□ -0.57
HMGN1P17-201ENST00000513734 PDCD7Q8N8D1 485 aaKnown RBP11.47□□□□□ -0.57
HMGN1P17-201ENST00000513734 ARHGEF1Q92888 912 aaKnown RBP11.47□□□□□ -0.57
HMGN1P17-201ENST00000513734 IER5LQ5T953 404 aa11.46□□□□□ -0.57
HMGN1P17-201ENST00000513734 OCEL1Q9H607 264 aa11.46□□□□□ -0.57
HMGN1P17-201ENST00000513734 SOGA1O94964 1423 aa11.45□□□□□ -0.58
HMGN1P17-201ENST00000513734 TDRD9Q8NDG6 1382 aaKnown RBP11.45□□□□□ -0.58
HMGN1P17-201ENST00000513734 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
HMGN1P17-201ENST00000513734 DCBLD2Q96PD2 775 aa11.44□□□□□ -0.58
HMGN1P17-201ENST00000513734 ARHGEF11O15085 1522 aa11.43□□□□□ -0.58
HMGN1P17-201ENST00000513734 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
HMGN1P17-201ENST00000513734 PLCG2P16885 1265 aa11.42□□□□□ -0.58
HMGN1P17-201ENST00000513734 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
HMGN1P17-201ENST00000513734 GPHNQ9NQX3 736 aaPredicted RBP11.41□□□□□ -0.58
HMGN1P17-201ENST00000513734 ABCA5Q8WWZ7 1642 aa11.41□□□□□ -0.58
HMGN1P17-201ENST00000513734 BIVM-ERCC5R4GMW8 1640 aa11.41□□□□□ -0.58
HMGN1P17-201ENST00000513734 G3V3G9 751 aa11.4□□□□□ -0.58
HMGN1P17-201ENST00000513734 BOLA1Q9Y3E2 137 aa11.4□□□□□ -0.58
HMGN1P17-201ENST00000513734 PPP1R15BQ5SWA1 713 aa11.39□□□□□ -0.59
HMGN1P17-201ENST00000513734 PELP1Q8IZL8 1130 aaKnown RBP11.39□□□□□ -0.59
HMGN1P17-201ENST00000513734 SEC24BO95487 1268 aa11.38□□□□□ -0.59
HMGN1P17-201ENST00000513734 TMC2Q8TDI7 906 aa11.37□□□□□ -0.59
HMGN1P17-201ENST00000513734 TOP2BQ02880 1626 aa11.37□□□□□ -0.59
HMGN1P17-201ENST00000513734 CLASP1Q7Z460 1538 aa11.36□□□□□ -0.59
HMGN1P17-201ENST00000513734 SEMA3EO15041 775 aa11.36□□□□□ -0.59
HMGN1P17-201ENST00000513734 CAMK2BQ13554 666 aa11.36□□□□□ -0.59
HMGN1P17-201ENST00000513734 TMEM121BQ9BXQ6 578 aaPredicted RBP11.36□□□□□ -0.59
HMGN1P17-201ENST00000513734 ABCA10Q8WWZ4 1543 aa11.35□□□□□ -0.59
HMGN1P17-201ENST00000513734 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
HMGN1P17-201ENST00000513734 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGN1P17-201ENST00000513734 COLQQ9Y215 455 aaPredicted RBP11.35□□□□□ -0.59
HMGN1P17-201ENST00000513734 GRIN2BQ13224 1484 aa11.35□□□□□ -0.59
HMGN1P17-201ENST00000513734 GAPVD1Q14C86 1478 aa11.34□□□□□ -0.59
HMGN1P17-201ENST00000513734 ARAP1Q96P48 1450 aa11.34□□□□□ -0.59
HMGN1P17-201ENST00000513734 MAGI1Q96QZ7 1491 aaPredicted RBP11.34□□□□□ -0.59
HMGN1P17-201ENST00000513734 DSG2Q14126 1118 aa11.34□□□□□ -0.59
HMGN1P17-201ENST00000513734 LMOD2Q6P5Q4 547 aa11.34□□□□□ -0.59
HMGN1P17-201ENST00000513734 L3MBTL3Q96JM7 780 aaPredicted RBP11.34□□□□□ -0.59
HMGN1P17-201ENST00000513734 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
HMGN1P17-201ENST00000513734 ARIH1Q9Y4X5 557 aaPredicted RBP11.32□□□□□ -0.6
HMGN1P17-201ENST00000513734 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
HMGN1P17-201ENST00000513734 WRNQ14191 1432 aaPredicted RBP eCLIP11.31□□□□□ -0.6
HMGN1P17-201ENST00000513734 ADAMTS12P58397 1594 aa11.31□□□□□ -0.6
HMGN1P17-201ENST00000513734 SYNJ2O15056 1496 aa11.31□□□□□ -0.6
HMGN1P17-201ENST00000513734 C2orf72A6NCS6 295 aa11.3□□□□□ -0.6
HMGN1P17-201ENST00000513734 C7P10643 843 aa11.3□□□□□ -0.6
HMGN1P17-201ENST00000513734 FOXK1P85037 733 aa11.29□□□□□ -0.6
HMGN1P17-201ENST00000513734 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms