RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 CCDC7Q96M83 1385 aa15.46■□□□□ 0.07
CTNND2-215ENST00000513588 CNTLNQ9NXG0 1405 aa15.45■□□□□ 0.06
CTNND2-215ENST00000513588 RTL5Q5HYW3 569 aaPredicted RBP15.45■□□□□ 0.06
CTNND2-215ENST00000513588 SNAPC4Q5SXM2 1469 aa15.44■□□□□ 0.06
CTNND2-215ENST00000513588 RGL3Q3MIN7 710 aa15.43■□□□□ 0.06
CTNND2-215ENST00000513588 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
CTNND2-215ENST00000513588 CCDC184Q52MB2 194 aa15.42■□□□□ 0.06
CTNND2-215ENST00000513588 MIA2Q96PC5 1412 aa15.42■□□□□ 0.06
CTNND2-215ENST00000513588 KIF7Q2M1P5 1343 aa15.42■□□□□ 0.06
CTNND2-215ENST00000513588 NBPF8Q3BBV2 869 aa15.42■□□□□ 0.06
CTNND2-215ENST00000513588 DCAF11Q8TEB1 546 aa15.42■□□□□ 0.06
CTNND2-215ENST00000513588 EPRSP07814 1512 aaKnown RBP15.41■□□□□ 0.06
CTNND2-215ENST00000513588 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
CTNND2-215ENST00000513588 GRIN2BQ13224 1484 aa15.41■□□□□ 0.06
CTNND2-215ENST00000513588 ZBED9Q6R2W3 1325 aa15.41■□□□□ 0.06
CTNND2-215ENST00000513588 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
CTNND2-215ENST00000513588 CTTNBP2Q8WZ74 1663 aa15.4■□□□□ 0.06
CTNND2-215ENST00000513588 CDK13Q14004 1512 aaKnown RBP15.4■□□□□ 0.06
CTNND2-215ENST00000513588 NUP155O75694 1391 aa15.4■□□□□ 0.06
CTNND2-215ENST00000513588 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
CTNND2-215ENST00000513588 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
CTNND2-215ENST00000513588 C11orf95C9JLR9 678 aaPredicted RBP15.38■□□□□ 0.05
CTNND2-215ENST00000513588 DAXXQ9UER7 740 aaPredicted RBP15.37■□□□□ 0.05
CTNND2-215ENST00000513588 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
CTNND2-215ENST00000513588 USP47Q96K76 1375 aa15.36■□□□□ 0.05
CTNND2-215ENST00000513588 CARMIL2Q6F5E8 1435 aa15.36■□□□□ 0.05
CTNND2-215ENST00000513588 NBR1Q14596 966 aa15.36■□□□□ 0.05
CTNND2-215ENST00000513588 JPH4Q96JJ6 628 aa15.34■□□□□ 0.05
CTNND2-215ENST00000513588 UGGT2Q9NYU1 1516 aa15.34■□□□□ 0.05
CTNND2-215ENST00000513588 IQGAP2Q13576 1575 aa15.34■□□□□ 0.05
CTNND2-215ENST00000513588 NUDCQ9Y266 331 aa15.34■□□□□ 0.05
CTNND2-215ENST00000513588 DAPK1P53355 1430 aa15.34■□□□□ 0.05
CTNND2-215ENST00000513588 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.04
CTNND2-215ENST00000513588 ZBTB47Q9UFB7 747 aaPredicted RBP15.32■□□□□ 0.04
CTNND2-215ENST00000513588 ANKRD30BQ9BXX2 1392 aa15.32■□□□□ 0.04
CTNND2-215ENST00000513588 HNRNPMP52272 730 aaKnown RBP eCLIP15.31■□□□□ 0.04
CTNND2-215ENST00000513588 ST20-MTHFSA0A0A6YYL1 179 aa15.31■□□□□ 0.04
CTNND2-215ENST00000513588 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
CTNND2-215ENST00000513588 ROCK1Q13464 1354 aa15.3■□□□□ 0.04
CTNND2-215ENST00000513588 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
CTNND2-215ENST00000513588 PRG4Q92954 1404 aaPredicted RBP15.29■□□□□ 0.04
CTNND2-215ENST00000513588 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
CTNND2-215ENST00000513588 ABCC5O15440 1437 aa15.28■□□□□ 0.04
CTNND2-215ENST00000513588 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
CTNND2-215ENST00000513588 NCOA1Q15788 1441 aa15.27■□□□□ 0.04
CTNND2-215ENST00000513588 CC2D1BQ5T0F9 858 aaKnown RBP15.27■□□□□ 0.04
CTNND2-215ENST00000513588 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
CTNND2-215ENST00000513588 ANKRD50Q9ULJ7 1429 aa15.26■□□□□ 0.03
CTNND2-215ENST00000513588 RALBP1Q15311 655 aa15.26■□□□□ 0.03
CTNND2-215ENST00000513588 SAMD9Q5K651 1589 aa15.26■□□□□ 0.03
CTNND2-215ENST00000513588 RPRD2Q5VT52 1461 aaKnown RBP15.26■□□□□ 0.03
CTNND2-215ENST00000513588 TCOF1Q13428 1488 aaKnown RBP15.25■□□□□ 0.03
CTNND2-215ENST00000513588 TROQ12816 1431 aaPredicted RBP15.24■□□□□ 0.03
CTNND2-215ENST00000513588 KIAA0586Q9BVV6 1533 aa15.24■□□□□ 0.03
CTNND2-215ENST00000513588 KIF15Q9NS87 1388 aa15.24■□□□□ 0.03
CTNND2-215ENST00000513588 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
CTNND2-215ENST00000513588 KIAA1107Q9UPP5 1409 aa15.23■□□□□ 0.03
CTNND2-215ENST00000513588 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
CTNND2-215ENST00000513588 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
CTNND2-215ENST00000513588 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
CTNND2-215ENST00000513588 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
CTNND2-215ENST00000513588 IFT140Q96RY7 1462 aa15.21■□□□□ 0.03
CTNND2-215ENST00000513588 MYBBP1AQ9BQG0 1328 aaKnown RBP15.21■□□□□ 0.03
CTNND2-215ENST00000513588 ANO8Q9HCE9 1232 aaPredicted RBP15.21■□□□□ 0.03
CTNND2-215ENST00000513588 ARID4BQ4LE39 1312 aaPredicted RBP15.21■□□□□ 0.03
CTNND2-215ENST00000513588 RCAN3Q9UKA8 241 aa15.21■□□□□ 0.03
CTNND2-215ENST00000513588 NLRP13Q86W25 1043 aa15.21■□□□□ 0.02
CTNND2-215ENST00000513588 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
CTNND2-215ENST00000513588 TMF1P82094 1093 aa15.19■□□□□ 0.02
CTNND2-215ENST00000513588 KNSTRNQ9Y448 316 aa15.19■□□□□ 0.02
CTNND2-215ENST00000513588 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
CTNND2-215ENST00000513588 MSH5O43196 834 aa15.18■□□□□ 0.02
CTNND2-215ENST00000513588 CAMSAP2Q08AD1 1489 aa15.16■□□□□ 0.02
CTNND2-215ENST00000513588 PNISRQ8TF01 805 aaKnown RBP15.16■□□□□ 0.02
CTNND2-215ENST00000513588 CCDC144AA2RUR9 1427 aa15.16■□□□□ 0.02
CTNND2-215ENST00000513588 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
CTNND2-215ENST00000513588 PLB1Q6P1J6 1458 aa15.16■□□□□ 0.02
CTNND2-215ENST00000513588 WDR62O43379 1518 aa15.15■□□□□ 0.02
CTNND2-215ENST00000513588 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
CTNND2-215ENST00000513588 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.14■□□□□ 0.01
CTNND2-215ENST00000513588 C9orf84Q5VXU9 1444 aa15.14■□□□□ 0.01
CTNND2-215ENST00000513588 NUP153P49790 1475 aaKnown RBP15.14■□□□□ 0.01
CTNND2-215ENST00000513588 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.13■□□□□ 0.01
CTNND2-215ENST00000513588 SMG6Q86US8 1419 aaKnown RBP15.13■□□□□ 0.01
CTNND2-215ENST00000513588 GRIN2AQ12879 1464 aa15.12■□□□□ 0.01
CTNND2-215ENST00000513588 PTPRGP23470 1445 aa15.12■□□□□ 0.01
CTNND2-215ENST00000513588 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
CTNND2-215ENST00000513588 DEKP35659 375 aaKnown RBP15.12■□□□□ 0.01
CTNND2-215ENST00000513588 RRP1P56182 461 aaKnown RBP15.12■□□□□ 0.01
CTNND2-215ENST00000513588 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
CTNND2-215ENST00000513588 CDCA8Q53HL2 280 aa15.12■□□□□ 0.01
CTNND2-215ENST00000513588 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
CTNND2-215ENST00000513588 KDM6BO15054 1643 aa15.11■□□□□ 0.01
CTNND2-215ENST00000513588 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
CTNND2-215ENST00000513588 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
CTNND2-215ENST00000513588 KIF21AQ7Z4S6 1674 aa15.11■□□□□ 0.01
CTNND2-215ENST00000513588 PANK3Q9H999 370 aa15.1■□□□□ 0.01
CTNND2-215ENST00000513588 GCC2Q8IWJ2 1684 aa15.1■□□□□ 0.01
CTNND2-215ENST00000513588 BRD4O60885 1362 aaPredicted RBP15.1■□□□□ 0.01
CTNND2-215ENST00000513588 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms