RNA–Protein interactions for RNA: ENST00000513588.5

CTNND2-215, Transcript of catenin delta 2, humanhuman

TSL 1 (best)

Gene CTNND2, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-215ENST00000513588 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
CTNND2-215ENST00000513588 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.77
CTNND2-215ENST00000513588 SUPT5HO00267 1087 aaKnown RBP19.71■□□□□ 0.75
CTNND2-215ENST00000513588 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
CTNND2-215ENST00000513588 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
CTNND2-215ENST00000513588 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
CTNND2-215ENST00000513588 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
CTNND2-215ENST00000513588 CCDC180Q9P1Z9 1646 aa18.56■□□□□ 0.56
CTNND2-215ENST00000513588 HRCP23327 699 aa18.48■□□□□ 0.55
CTNND2-215ENST00000513588 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
CTNND2-215ENST00000513588 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
CTNND2-215ENST00000513588 FAM9AQ8IZU1 332 aaPredicted RBP18.32■□□□□ 0.52
CTNND2-215ENST00000513588 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
CTNND2-215ENST00000513588 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
CTNND2-215ENST00000513588 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
CTNND2-215ENST00000513588 TRIM26Q12899 539 aaPredicted RBP18.14■□□□□ 0.49
CTNND2-215ENST00000513588 DCAF1Q9Y4B6 1507 aa18■□□□□ 0.47
CTNND2-215ENST00000513588 ZEB1P37275 1124 aaPredicted RBP17.97■□□□□ 0.47
CTNND2-215ENST00000513588 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
CTNND2-215ENST00000513588 ABCC9O60706 1549 aa17.82■□□□□ 0.44
CTNND2-215ENST00000513588 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
CTNND2-215ENST00000513588 RSF1Q96T23 1441 aaPredicted RBP17.77■□□□□ 0.44
CTNND2-215ENST00000513588 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
CTNND2-215ENST00000513588 UBTFP17480 764 aaKnown RBP17.58■□□□□ 0.4
CTNND2-215ENST00000513588 PELP1Q8IZL8 1130 aaKnown RBP17.53■□□□□ 0.4
CTNND2-215ENST00000513588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.51■□□□□ 0.39
CTNND2-215ENST00000513588 RB1CC1Q8TDY2 1594 aa17.49■□□□□ 0.39
CTNND2-215ENST00000513588 APLP2Q06481 763 aa17.46■□□□□ 0.39
CTNND2-215ENST00000513588 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
CTNND2-215ENST00000513588 NACADO15069 1562 aa17.42■□□□□ 0.38
CTNND2-215ENST00000513588 RANGAP1P46060 587 aaPredicted RBP17.39■□□□□ 0.37
CTNND2-215ENST00000513588 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.37
CTNND2-215ENST00000513588 MROH2BQ7Z745 1585 aa17.33■□□□□ 0.37
CTNND2-215ENST00000513588 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTNND2-215ENST00000513588 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
CTNND2-215ENST00000513588 DIEXFQ68CQ4 756 aaKnown RBP17.23■□□□□ 0.35
CTNND2-215ENST00000513588 HNRNPUL2Q1KMD3 747 aaKnown RBP17.21■□□□□ 0.35
CTNND2-215ENST00000513588 WIZO95785 1651 aa17.18■□□□□ 0.34
CTNND2-215ENST00000513588 BAZ1AQ9NRL2 1556 aaPredicted RBP17.18■□□□□ 0.34
CTNND2-215ENST00000513588 YTHDC1Q96MU7 727 aaKnown RBP17.13■□□□□ 0.33
CTNND2-215ENST00000513588 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
CTNND2-215ENST00000513588 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
CTNND2-215ENST00000513588 ABCC8Q09428 1581 aa17.02■□□□□ 0.32
CTNND2-215ENST00000513588 ACIN1Q9UKV3 1341 aaKnown RBP17.02■□□□□ 0.32
CTNND2-215ENST00000513588 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
CTNND2-215ENST00000513588 MYT1Q01538 1121 aa17■□□□□ 0.31
CTNND2-215ENST00000513588 SOGA1O94964 1423 aa17■□□□□ 0.31
CTNND2-215ENST00000513588 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
CTNND2-215ENST00000513588 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
CTNND2-215ENST00000513588 EEA1Q15075 1411 aa16.98■□□□□ 0.31
CTNND2-215ENST00000513588 GTF3C3Q9Y5Q9 886 aa16.97■□□□□ 0.31
CTNND2-215ENST00000513588 TOP2AP11388 1531 aaKnown RBP16.94■□□□□ 0.3
CTNND2-215ENST00000513588 NEUROD1Q13562 356 aa16.93■□□□□ 0.3
CTNND2-215ENST00000513588 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
CTNND2-215ENST00000513588 GOLGA3Q08378 1498 aa16.91■□□□□ 0.3
CTNND2-215ENST00000513588 ITGAEP38570 1179 aa16.87■□□□□ 0.29
CTNND2-215ENST00000513588 CLIP1P30622 1438 aa16.85■□□□□ 0.29
CTNND2-215ENST00000513588 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
CTNND2-215ENST00000513588 ATP1B4Q9UN42 357 aaPredicted RBP16.84■□□□□ 0.29
CTNND2-215ENST00000513588 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
CTNND2-215ENST00000513588 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
CTNND2-215ENST00000513588 SMARCA2P51531 1590 aa16.78■□□□□ 0.28
CTNND2-215ENST00000513588 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
CTNND2-215ENST00000513588 MIER1Q8N108 512 aa16.68■□□□□ 0.26
CTNND2-215ENST00000513588 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
CTNND2-215ENST00000513588 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
CTNND2-215ENST00000513588 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
CTNND2-215ENST00000513588 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
CTNND2-215ENST00000513588 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
CTNND2-215ENST00000513588 P3H3Q8IVL6 736 aa16.5■□□□□ 0.23
CTNND2-215ENST00000513588 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
CTNND2-215ENST00000513588 KANK4Q5T7N3 995 aaPredicted RBP16.45■□□□□ 0.22
CTNND2-215ENST00000513588 SYNJ1O43426 1573 aa16.45■□□□□ 0.22
CTNND2-215ENST00000513588 CLSPNQ9HAW4 1339 aa16.43■□□□□ 0.22
CTNND2-215ENST00000513588 NEFLP07196 543 aa16.42■□□□□ 0.22
CTNND2-215ENST00000513588 KIF21BO75037 1637 aa16.4■□□□□ 0.22
CTNND2-215ENST00000513588 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
CTNND2-215ENST00000513588 BICRAQ9NZM4 1560 aa16.36■□□□□ 0.21
CTNND2-215ENST00000513588 CCNB3Q8WWL7 1395 aa16.35■□□□□ 0.21
CTNND2-215ENST00000513588 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
CTNND2-215ENST00000513588 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
CTNND2-215ENST00000513588 CUX2O14529 1486 aa16.29■□□□□ 0.2
CTNND2-215ENST00000513588 BCANQ96GW7 911 aa16.28■□□□□ 0.2
CTNND2-215ENST00000513588 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
CTNND2-215ENST00000513588 ANP32CO43423 234 aa16.25■□□□□ 0.19
CTNND2-215ENST00000513588 CARMIL1Q5VZK9 1371 aa16.24■□□□□ 0.19
CTNND2-215ENST00000513588 TOP2BQ02880 1626 aa16.22■□□□□ 0.19
CTNND2-215ENST00000513588 SIN3AQ96ST3 1273 aa16.21■□□□□ 0.18
CTNND2-215ENST00000513588 HIRIP3Q9BW71 556 aaPredicted RBP16.2■□□□□ 0.18
CTNND2-215ENST00000513588 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
CTNND2-215ENST00000513588 RAB3GAP2Q9H2M9 1393 aa16.19■□□□□ 0.18
CTNND2-215ENST00000513588 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
CTNND2-215ENST00000513588 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
CTNND2-215ENST00000513588 ERICH3Q5RHP9 1530 aa16.18■□□□□ 0.18
CTNND2-215ENST00000513588 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
CTNND2-215ENST00000513588 NCAPD3P42695 1498 aa16.16■□□□□ 0.18
CTNND2-215ENST00000513588 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
CTNND2-215ENST00000513588 SETD5Q9C0A6 1442 aa16.14■□□□□ 0.17
CTNND2-215ENST00000513588 MTUS2Q5JR59 1369 aa16.14■□□□□ 0.17
CTNND2-215ENST00000513588 SUPT16HQ9Y5B9 1047 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms