RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
CCSER1-207ENST00000508550 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
CCSER1-207ENST00000508550 PRDM2Q13029 1718 aa13.07□□□□□ -0.32
CCSER1-207ENST00000508550 BIVM-ERCC5R4GMW8 1640 aa13.06□□□□□ -0.32
CCSER1-207ENST00000508550 SYNJ1O43426 1573 aa13.05□□□□□ -0.32
CCSER1-207ENST00000508550 RNF25Q96BH1 459 aaPredicted RBP13.02□□□□□ -0.33
CCSER1-207ENST00000508550 CUX1P39880 1505 aa13.02□□□□□ -0.33
CCSER1-207ENST00000508550 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
CCSER1-207ENST00000508550 CEP164Q9UPV0 1460 aa13□□□□□ -0.33
CCSER1-207ENST00000508550 DPY19L2Q6NUT2 758 aa13□□□□□ -0.33
CCSER1-207ENST00000508550 SOGA1O94964 1423 aa12.98□□□□□ -0.33
CCSER1-207ENST00000508550 ST18O60284 1047 aa12.98□□□□□ -0.33
CCSER1-207ENST00000508550 KIF27Q86VH2 1401 aa12.97□□□□□ -0.33
CCSER1-207ENST00000508550 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
CCSER1-207ENST00000508550 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
CCSER1-207ENST00000508550 SNPHO15079 494 aa12.96□□□□□ -0.33
CCSER1-207ENST00000508550 EFCAB3Q8N7B9 438 aa12.96□□□□□ -0.33
CCSER1-207ENST00000508550 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
CCSER1-207ENST00000508550 NESP48681 1621 aa12.94□□□□□ -0.34
CCSER1-207ENST00000508550 TNIKQ9UKE5 1360 aa12.94□□□□□ -0.34
CCSER1-207ENST00000508550 LOC105371045A0A1W2PR82 267 aa12.93□□□□□ -0.34
CCSER1-207ENST00000508550 BOLA1Q9Y3E2 137 aa12.93□□□□□ -0.34
CCSER1-207ENST00000508550 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
CCSER1-207ENST00000508550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.92□□□□□ -0.34
CCSER1-207ENST00000508550 ZFP91Q96JP5 570 aaPredicted RBP12.92□□□□□ -0.34
CCSER1-207ENST00000508550 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
CCSER1-207ENST00000508550 TMEM121BQ9BXQ6 578 aaPredicted RBP12.91□□□□□ -0.34
CCSER1-207ENST00000508550 ABCA10Q8WWZ4 1543 aa12.9□□□□□ -0.34
CCSER1-207ENST00000508550 SOX12O15370 315 aa12.9□□□□□ -0.34
CCSER1-207ENST00000508550 GOLGA3Q08378 1498 aa12.9□□□□□ -0.34
CCSER1-207ENST00000508550 FAM9AQ8IZU1 332 aaPredicted RBP12.89□□□□□ -0.35
CCSER1-207ENST00000508550 FGD5Q6ZNL6 1462 aa12.89□□□□□ -0.35
CCSER1-207ENST00000508550 PRXQ9BXM0 1461 aa12.89□□□□□ -0.35
CCSER1-207ENST00000508550 KIF21BO75037 1637 aa12.88□□□□□ -0.35
CCSER1-207ENST00000508550 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
CCSER1-207ENST00000508550 ERICH3Q5RHP9 1530 aa12.87□□□□□ -0.35
CCSER1-207ENST00000508550 MRC2Q9UBG0 1479 aa12.86□□□□□ -0.35
CCSER1-207ENST00000508550 TAOK2Q9UL54 1235 aa12.86□□□□□ -0.35
CCSER1-207ENST00000508550 URB2Q14146 1524 aaKnown RBP12.86□□□□□ -0.35
CCSER1-207ENST00000508550 RUSC2Q8N2Y8 1516 aa12.86□□□□□ -0.35
CCSER1-207ENST00000508550 IGF1RP08069 1367 aa12.85□□□□□ -0.35
CCSER1-207ENST00000508550 G3V3G9 751 aa12.85□□□□□ -0.35
CCSER1-207ENST00000508550 PKD2Q13563 968 aa12.82□□□□□ -0.36
CCSER1-207ENST00000508550 CDAN1Q8IWY9 1227 aa12.82□□□□□ -0.36
CCSER1-207ENST00000508550 CUX2O14529 1486 aa12.82□□□□□ -0.36
CCSER1-207ENST00000508550 MS4A4AQ96JQ5 239 aa12.81□□□□□ -0.36
CCSER1-207ENST00000508550 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
CCSER1-207ENST00000508550 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
CCSER1-207ENST00000508550 WDR62O43379 1518 aa12.79□□□□□ -0.36
CCSER1-207ENST00000508550 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
CCSER1-207ENST00000508550 BCL11BQ9C0K0 894 aaPredicted RBP12.77□□□□□ -0.37
CCSER1-207ENST00000508550 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
CCSER1-207ENST00000508550 IFT140Q96RY7 1462 aa12.77□□□□□ -0.37
CCSER1-207ENST00000508550 UBTFP17480 764 aaKnown RBP12.76□□□□□ -0.37
CCSER1-207ENST00000508550 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
CCSER1-207ENST00000508550 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
CCSER1-207ENST00000508550 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
CCSER1-207ENST00000508550 HOXB3P14651 431 aaPredicted RBP12.74□□□□□ -0.37
CCSER1-207ENST00000508550 FBXO22Q8NEZ5 403 aa12.74□□□□□ -0.37
CCSER1-207ENST00000508550 RAD54L2Q9Y4B4 1467 aa12.73□□□□□ -0.37
CCSER1-207ENST00000508550 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
CCSER1-207ENST00000508550 MARVELD3Q96A59 401 aa12.73□□□□□ -0.37
CCSER1-207ENST00000508550 RGL2O15211 777 aa12.72□□□□□ -0.37
CCSER1-207ENST00000508550 NLRP6P59044 892 aa12.72□□□□□ -0.37
CCSER1-207ENST00000508550 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
CCSER1-207ENST00000508550 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
CCSER1-207ENST00000508550 GAPVD1Q14C86 1478 aa12.71□□□□□ -0.38
CCSER1-207ENST00000508550 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
CCSER1-207ENST00000508550 STK25O00506 426 aa12.69□□□□□ -0.38
CCSER1-207ENST00000508550 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
CCSER1-207ENST00000508550 CUL7Q14999 1698 aa12.68□□□□□ -0.38
CCSER1-207ENST00000508550 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
CCSER1-207ENST00000508550 ABCA5Q8WWZ7 1642 aa12.68□□□□□ -0.38
CCSER1-207ENST00000508550 CLIP1P30622 1438 aa12.66□□□□□ -0.38
CCSER1-207ENST00000508550 EMP3P54852 163 aa12.66□□□□□ -0.38
CCSER1-207ENST00000508550 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
CCSER1-207ENST00000508550 TDRD9Q8NDG6 1382 aaKnown RBP12.65□□□□□ -0.38
CCSER1-207ENST00000508550 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
CCSER1-207ENST00000508550 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
CCSER1-207ENST00000508550 DOK7Q18PE1 504 aa12.64□□□□□ -0.39
CCSER1-207ENST00000508550 HOXB1P14653 301 aaPredicted RBP12.62□□□□□ -0.39
CCSER1-207ENST00000508550 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
CCSER1-207ENST00000508550 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
CCSER1-207ENST00000508550 ZNF710Q8N1W2 664 aa12.59□□□□□ -0.39
CCSER1-207ENST00000508550 HS3ST6Q96QI5 342 aa12.59□□□□□ -0.39
CCSER1-207ENST00000508550 VPS8Q8N3P4 1428 aa12.59□□□□□ -0.39
CCSER1-207ENST00000508550 FAM205CA6NFA0 338 aa12.57□□□□□ -0.4
CCSER1-207ENST00000508550 TRIM26Q12899 539 aaPredicted RBP12.57□□□□□ -0.4
CCSER1-207ENST00000508550 ZSWIM6Q9HCJ5 1215 aa12.57□□□□□ -0.4
CCSER1-207ENST00000508550 MAGI1Q96QZ7 1491 aaPredicted RBP12.57□□□□□ -0.4
CCSER1-207ENST00000508550 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
CCSER1-207ENST00000508550 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
CCSER1-207ENST00000508550 EFCAB5A4FU69 1503 aa12.54□□□□□ -0.4
CCSER1-207ENST00000508550 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
CCSER1-207ENST00000508550 KIF3CO14782 793 aa12.52□□□□□ -0.41
CCSER1-207ENST00000508550 GPR153Q6NV75 609 aa12.52□□□□□ -0.41
CCSER1-207ENST00000508550 KRTAP3-3Q9BYR6 98 aa12.51□□□□□ -0.41
CCSER1-207ENST00000508550 KRTAP3-2Q9BYR7 98 aa12.51□□□□□ -0.41
CCSER1-207ENST00000508550 ARHGAP35Q9NRY4 1499 aa12.51□□□□□ -0.41
CCSER1-207ENST00000508550 ZNF608Q9ULD9 1512 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms