RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
CCSER1-207ENST00000508550 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
CCSER1-207ENST00000508550 SENP3Q9H4L4 574 aaPredicted RBP24.17■■□□□ 1.46
CCSER1-207ENST00000508550 PHF23Q9BUL5 403 aaPredicted RBP23.89■■□□□ 1.41
CCSER1-207ENST00000508550 FOXD1Q16676 465 aa22.52■■□□□ 1.2
CCSER1-207ENST00000508550 PLPPR3Q6T4P5 718 aa21.67■■□□□ 1.06
CCSER1-207ENST00000508550 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
CCSER1-207ENST00000508550 ADRA2BP18089 450 aa21.06■□□□□ 0.96
CCSER1-207ENST00000508550 MSH5O43196 834 aa21.03■□□□□ 0.96
CCSER1-207ENST00000508550 PIAS4Q8N2W9 510 aaPredicted RBP21.01■□□□□ 0.95
CCSER1-207ENST00000508550 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
CCSER1-207ENST00000508550 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
CCSER1-207ENST00000508550 SCAF1Q9H7N4 1312 aaKnown RBP19.3■□□□□ 0.68
CCSER1-207ENST00000508550 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
CCSER1-207ENST00000508550 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
CCSER1-207ENST00000508550 CNKSR2Q8WXI2 1034 aa18.63■□□□□ 0.57
CCSER1-207ENST00000508550 HOXD11P31277 338 aaPredicted RBP18.57■□□□□ 0.56
CCSER1-207ENST00000508550 RNF216Q9NWF9 866 aaPredicted RBP18.46■□□□□ 0.55
CCSER1-207ENST00000508550 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
CCSER1-207ENST00000508550 DCAF8L1A6NGE4 600 aa18.27■□□□□ 0.52
CCSER1-207ENST00000508550 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
CCSER1-207ENST00000508550 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
CCSER1-207ENST00000508550 DNAJC5BQ9UF47 199 aa17.99■□□□□ 0.47
CCSER1-207ENST00000508550 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
CCSER1-207ENST00000508550 CACNB1Q02641 598 aaPredicted RBP17.92■□□□□ 0.46
CCSER1-207ENST00000508550 KCNA4P22459 653 aa17.79■□□□□ 0.44
CCSER1-207ENST00000508550 C1QBPQ07021 282 aaKnown RBP17.72■□□□□ 0.43
CCSER1-207ENST00000508550 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
CCSER1-207ENST00000508550 U3KPZ7 1027 aaPredicted RBP17.29■□□□□ 0.36
CCSER1-207ENST00000508550 SLC4A2P04920 1241 aa17.23■□□□□ 0.35
CCSER1-207ENST00000508550 SPINK5Q9NQ38 1064 aaPredicted RBP16.97■□□□□ 0.31
CCSER1-207ENST00000508550 CAPN15O75808 1086 aa16.9■□□□□ 0.3
CCSER1-207ENST00000508550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
CCSER1-207ENST00000508550 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
CCSER1-207ENST00000508550 DSG3P32926 999 aa16.85■□□□□ 0.29
CCSER1-207ENST00000508550 APLP2Q06481 763 aa16.82■□□□□ 0.28
CCSER1-207ENST00000508550 SLC4A1APQ9BWU0 796 aaKnown RBP16.8■□□□□ 0.28
CCSER1-207ENST00000508550 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
CCSER1-207ENST00000508550 ZNF219Q9P2Y4 722 aaPredicted RBP16.69■□□□□ 0.26
CCSER1-207ENST00000508550 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
CCSER1-207ENST00000508550 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
CCSER1-207ENST00000508550 FOXD4L1Q9NU39 408 aa16.56■□□□□ 0.24
CCSER1-207ENST00000508550 ABCB7O75027 752 aa16.51■□□□□ 0.23
CCSER1-207ENST00000508550 ZBTB22O15209 634 aa16.37■□□□□ 0.21
CCSER1-207ENST00000508550 POLA2Q14181 598 aa16.29■□□□□ 0.2
CCSER1-207ENST00000508550 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
CCSER1-207ENST00000508550 ATXN8OSP0DMR3 200 aa16.12■□□□□ 0.17
CCSER1-207ENST00000508550 RBM42Q9BTD8 480 aaKnown RBP16.06■□□□□ 0.16
CCSER1-207ENST00000508550 ZBTB12Q9Y330 459 aaPredicted RBP15.99■□□□□ 0.15
CCSER1-207ENST00000508550 POTEHQ6S545 545 aa15.92■□□□□ 0.14
CCSER1-207ENST00000508550 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
CCSER1-207ENST00000508550 AKT1S1Q96B36 256 aa15.75■□□□□ 0.11
CCSER1-207ENST00000508550 CSRNP3Q8WYN3 585 aa15.74■□□□□ 0.11
CCSER1-207ENST00000508550 OSCARQ8IYS5 282 aa15.72■□□□□ 0.11
CCSER1-207ENST00000508550 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
CCSER1-207ENST00000508550 FBLN2P98095 1184 aa15.62■□□□□ 0.09
CCSER1-207ENST00000508550 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
CCSER1-207ENST00000508550 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
CCSER1-207ENST00000508550 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
CCSER1-207ENST00000508550 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
CCSER1-207ENST00000508550 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
CCSER1-207ENST00000508550 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
CCSER1-207ENST00000508550 PITPNM1O00562 1244 aa15.39■□□□□ 0.05
CCSER1-207ENST00000508550 SSUH2Q9Y2M2 353 aa15.34■□□□□ 0.05
CCSER1-207ENST00000508550 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
CCSER1-207ENST00000508550 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
CCSER1-207ENST00000508550 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCSER1-207ENST00000508550 ZCCHC6Q5VYS8 1495 aaKnown RBP15.27■□□□□ 0.03
CCSER1-207ENST00000508550 SPDYE1Q8NFV5 336 aaPredicted RBP15.2■□□□□ 0.02
CCSER1-207ENST00000508550 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
CCSER1-207ENST00000508550 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
CCSER1-207ENST00000508550 MYO15BQ96JP2 1530 aa15.08■□□□□ 0.01
CCSER1-207ENST00000508550 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
CCSER1-207ENST00000508550 SP7Q8TDD2 431 aaPredicted RBP14.99□□□□□ -0.01
CCSER1-207ENST00000508550 HAX1O00165 279 aa14.97□□□□□ -0.01
CCSER1-207ENST00000508550 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
CCSER1-207ENST00000508550 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
CCSER1-207ENST00000508550 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
CCSER1-207ENST00000508550 EVX2Q03828 476 aa14.83□□□□□ -0.04
CCSER1-207ENST00000508550 NACADO15069 1562 aa14.81□□□□□ -0.04
CCSER1-207ENST00000508550 CHADLQ6NUI6 762 aa14.8□□□□□ -0.04
CCSER1-207ENST00000508550 C19orf67A6NJJ6 358 aa14.78□□□□□ -0.04
CCSER1-207ENST00000508550 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
CCSER1-207ENST00000508550 ABCC9O60706 1549 aa14.76□□□□□ -0.05
CCSER1-207ENST00000508550 STAG3Q9UJ98 1225 aa14.74□□□□□ -0.05
CCSER1-207ENST00000508550 FARP1Q9Y4F1 1045 aaPredicted RBP14.66□□□□□ -0.06
CCSER1-207ENST00000508550 PROM2Q8N271 834 aa14.62□□□□□ -0.07
CCSER1-207ENST00000508550 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
CCSER1-207ENST00000508550 CREBZFQ9NS37 354 aa14.61□□□□□ -0.07
CCSER1-207ENST00000508550 GABBR2O75899 941 aa14.51□□□□□ -0.09
CCSER1-207ENST00000508550 CD44P16070 742 aaKnown RBP14.5□□□□□ -0.09
CCSER1-207ENST00000508550 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
CCSER1-207ENST00000508550 MNX1P50219 401 aaPredicted RBP14.41□□□□□ -0.1
CCSER1-207ENST00000508550 CLCN6P51797 869 aa14.41□□□□□ -0.1
CCSER1-207ENST00000508550 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
CCSER1-207ENST00000508550 NPM1P06748 294 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCSER1-207ENST00000508550 SCRIBQ14160 1630 aa14.33□□□□□ -0.12
CCSER1-207ENST00000508550 ZRANB1Q9UGI0 708 aa14.31□□□□□ -0.12
CCSER1-207ENST00000508550 POTEIP0CG38 1075 aa14.22□□□□□ -0.13
CCSER1-207ENST00000508550 PAK3O75914 559 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms