RNA–Protein interactions for RNA: ENST00000507469.5

SMG7-212, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-212ENST00000507469 NAIPQ13075 1403 aa15.68■□□□□ 0.1
SMG7-212ENST00000507469 CUL7Q14999 1698 aa15.68■□□□□ 0.1
SMG7-212ENST00000507469 WDR43Q15061 677 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMG7-212ENST00000507469 CANXP27824 592 aaKnown RBP15.65■□□□□ 0.1
SMG7-212ENST00000507469 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
SMG7-212ENST00000507469 HNRNPMP52272 730 aaKnown RBP eCLIP15.64■□□□□ 0.092e-6■□□□□ 8.9
SMG7-212ENST00000507469 ZBTB47Q9UFB7 747 aaPredicted RBP15.64■□□□□ 0.09
SMG7-212ENST00000507469 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
SMG7-212ENST00000507469 CCDC7Q96M83 1385 aa15.63■□□□□ 0.09
SMG7-212ENST00000507469 SUPT6HQ7KZ85 1726 aaKnown RBP15.63■□□□□ 0.09
SMG7-212ENST00000507469 NBR1Q14596 966 aa15.62■□□□□ 0.09
SMG7-212ENST00000507469 MIA2Q96PC5 1412 aa15.61■□□□□ 0.09
SMG7-212ENST00000507469 CC2D1BQ5T0F9 858 aaKnown RBP15.61■□□□□ 0.09
SMG7-212ENST00000507469 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
SMG7-212ENST00000507469 LAMC3Q9Y6N6 1575 aa15.6■□□□□ 0.09
SMG7-212ENST00000507469 URB2Q14146 1524 aaKnown RBP15.6■□□□□ 0.09
SMG7-212ENST00000507469 ROCK2O75116 1388 aaKnown RBP15.6■□□□□ 0.09
SMG7-212ENST00000507469 KIF7Q2M1P5 1343 aa15.59■□□□□ 0.09
SMG7-212ENST00000507469 KNSTRNQ9Y448 316 aa15.59■□□□□ 0.09
SMG7-212ENST00000507469 USP47Q96K76 1375 aa15.59■□□□□ 0.09
SMG7-212ENST00000507469 ZBED9Q6R2W3 1325 aa15.58■□□□□ 0.08
SMG7-212ENST00000507469 DNAJC5BQ9UF47 199 aa15.58■□□□□ 0.08
SMG7-212ENST00000507469 HECW1Q76N89 1606 aa15.58■□□□□ 0.08
SMG7-212ENST00000507469 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
SMG7-212ENST00000507469 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.57■□□□□ 0.08
SMG7-212ENST00000507469 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
SMG7-212ENST00000507469 NUDCQ9Y266 331 aa15.57■□□□□ 0.08
SMG7-212ENST00000507469 RALBP1Q15311 655 aa15.56■□□□□ 0.08
SMG7-212ENST00000507469 TMF1P82094 1093 aa15.56■□□□□ 0.08
SMG7-212ENST00000507469 ST20-MTHFSA0A0A6YYL1 179 aa15.56■□□□□ 0.08
SMG7-212ENST00000507469 CDCA8Q53HL2 280 aa15.56■□□□□ 0.08
SMG7-212ENST00000507469 NBPF8Q3BBV2 869 aa15.55■□□□□ 0.08
SMG7-212ENST00000507469 CDK13Q14004 1512 aaKnown RBP15.55■□□□□ 0.08
SMG7-212ENST00000507469 PTPRKQ15262 1439 aa15.55■□□□□ 0.08
SMG7-212ENST00000507469 PTPN23Q9H3S7 1636 aa15.55■□□□□ 0.08
SMG7-212ENST00000507469 KTN1Q86UP2 1357 aaKnown RBP15.54■□□□□ 0.08
SMG7-212ENST00000507469 MRC2Q9UBG0 1479 aa15.54■□□□□ 0.08
SMG7-212ENST00000507469 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMG7-212ENST00000507469 RSPH4AQ5TD94 716 aa15.53■□□□□ 0.08
SMG7-212ENST00000507469 DAPK1P53355 1430 aa15.51■□□□□ 0.07
SMG7-212ENST00000507469 IQGAP2Q13576 1575 aa15.51■□□□□ 0.07
SMG7-212ENST00000507469 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
SMG7-212ENST00000507469 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
SMG7-212ENST00000507469 KIF15Q9NS87 1388 aa15.5■□□□□ 0.07
SMG7-212ENST00000507469 NOP58Q9Y2X3 529 aaKnown RBP15.49■□□□□ 0.07
SMG7-212ENST00000507469 IFT140Q96RY7 1462 aa15.49■□□□□ 0.07
SMG7-212ENST00000507469 PRG4Q92954 1404 aaPredicted RBP15.49■□□□□ 0.07
SMG7-212ENST00000507469 CCDC184Q52MB2 194 aa15.48■□□□□ 0.07
SMG7-212ENST00000507469 PTPRGP23470 1445 aa15.48■□□□□ 0.07
SMG7-212ENST00000507469 NLRP13Q86W25 1043 aa15.48■□□□□ 0.07
SMG7-212ENST00000507469 RCAN3Q9UKA8 241 aa15.48■□□□□ 0.07
SMG7-212ENST00000507469 SNAPC4Q5SXM2 1469 aa15.47■□□□□ 0.07
SMG7-212ENST00000507469 ROCK1Q13464 1354 aa15.47■□□□□ 0.07
SMG7-212ENST00000507469 MYBBP1AQ9BQG0 1328 aaKnown RBP15.47■□□□□ 0.07
SMG7-212ENST00000507469 TROQ12816 1431 aaPredicted RBP15.47■□□□□ 0.07
SMG7-212ENST00000507469 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
SMG7-212ENST00000507469 KIAA0586Q9BVV6 1533 aa15.46■□□□□ 0.07
SMG7-212ENST00000507469 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.06
SMG7-212ENST00000507469 CTTNBP2Q8WZ74 1663 aa15.45■□□□□ 0.06
SMG7-212ENST00000507469 ARID4BQ4LE39 1312 aaPredicted RBP15.45■□□□□ 0.06
SMG7-212ENST00000507469 C11orf95C9JLR9 678 aaPredicted RBP15.45■□□□□ 0.06
SMG7-212ENST00000507469 ANKRD30BQ9BXX2 1392 aa15.45■□□□□ 0.06
SMG7-212ENST00000507469 KIAA1107Q9UPP5 1409 aa15.43■□□□□ 0.06
SMG7-212ENST00000507469 THOC2Q8NI27 1593 aaKnown RBP15.43■□□□□ 0.06
SMG7-212ENST00000507469 ABCC5O15440 1437 aa15.43■□□□□ 0.06
SMG7-212ENST00000507469 UGGT2Q9NYU1 1516 aa15.42■□□□□ 0.06
SMG7-212ENST00000507469 NEFMP07197 916 aa15.41■□□□□ 0.06
SMG7-212ENST00000507469 KANK1Q14678 1352 aa15.4■□□□□ 0.06
SMG7-212ENST00000507469 FANCIQ9NVI1 1328 aa15.39■□□□□ 0.05
SMG7-212ENST00000507469 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
SMG7-212ENST00000507469 AKNAQ7Z591 1439 aa15.39■□□□□ 0.05
SMG7-212ENST00000507469 PANK3Q9H999 370 aa15.38■□□□□ 0.05
SMG7-212ENST00000507469 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
SMG7-212ENST00000507469 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
SMG7-212ENST00000507469 SLC24A1O60721 1099 aa15.36■□□□□ 0.05
SMG7-212ENST00000507469 STAG3Q9UJ98 1225 aa15.36■□□□□ 0.05
SMG7-212ENST00000507469 RPRD2Q5VT52 1461 aaKnown RBP15.36■□□□□ 0.05
SMG7-212ENST00000507469 NCOA1Q15788 1441 aa15.35■□□□□ 0.05
SMG7-212ENST00000507469 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
SMG7-212ENST00000507469 SENP3Q9H4L4 574 aaPredicted RBP15.35■□□□□ 0.05
SMG7-212ENST00000507469 SPAG9O60271 1321 aaKnown RBP15.35■□□□□ 0.05
SMG7-212ENST00000507469 UPF2Q9HAU5 1272 aaKnown RBP15.35■□□□□ 0.05
SMG7-212ENST00000507469 ZNF608Q9ULD9 1512 aaPredicted RBP15.34■□□□□ 0.05
SMG7-212ENST00000507469 CAMSAP2Q08AD1 1489 aa15.34■□□□□ 0.05
SMG7-212ENST00000507469 PLB1Q6P1J6 1458 aa15.34■□□□□ 0.05
SMG7-212ENST00000507469 TCERG1O14776 1098 aaKnown RBP15.34■□□□□ 0.05
SMG7-212ENST00000507469 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
SMG7-212ENST00000507469 RRP1P56182 461 aaKnown RBP15.33■□□□□ 0.04
SMG7-212ENST00000507469 GRIN2AQ12879 1464 aa15.33■□□□□ 0.04
SMG7-212ENST00000507469 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.04
SMG7-212ENST00000507469 CFAP53Q96M91 514 aa15.32■□□□□ 0.04
SMG7-212ENST00000507469 RGS3P49796 1198 aa15.32■□□□□ 0.04
SMG7-212ENST00000507469 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
SMG7-212ENST00000507469 KIF3BO15066 747 aa15.31■□□□□ 0.04
SMG7-212ENST00000507469 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
SMG7-212ENST00000507469 SYNJ2O15056 1496 aa15.31■□□□□ 0.04
SMG7-212ENST00000507469 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
SMG7-212ENST00000507469 PNISRQ8TF01 805 aaKnown RBP15.31■□□□□ 0.04
SMG7-212ENST00000507469 IPO9Q96P70 1041 aaKnown RBP15.3■□□□□ 0.04
SMG7-212ENST00000507469 BCL11AQ9H165 835 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms