RNA–Protein interactions for RNA: ENST00000494502.6

PDCD10-217, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-217ENST00000494502 CFTRP13569 1480 aa17.17■□□□□ 0.34
PDCD10-217ENST00000494502 URB2Q14146 1524 aaKnown RBP17.13■□□□□ 0.33
PDCD10-217ENST00000494502 GOLGA2Q08379 1002 aa17.13■□□□□ 0.33
PDCD10-217ENST00000494502 TOP2AP11388 1531 aaKnown RBP17.1■□□□□ 0.33
PDCD10-217ENST00000494502 GABBR2O75899 941 aa17.09■□□□□ 0.33
PDCD10-217ENST00000494502 MKRN3Q13064 507 aaKnown RBP17.09■□□□□ 0.33
PDCD10-217ENST00000494502 PRDM2Q13029 1718 aa17.08■□□□□ 0.32
PDCD10-217ENST00000494502 MS4A4AQ96JQ5 239 aa17.08■□□□□ 0.32
PDCD10-217ENST00000494502 TRIM35Q9UPQ4 493 aa17.08■□□□□ 0.32
PDCD10-217ENST00000494502 PPP1R37O75864 691 aa17.07■□□□□ 0.32
PDCD10-217ENST00000494502 ASTLQ6HA08 431 aaPredicted RBP17.05■□□□□ 0.32
PDCD10-217ENST00000494502 ILDR1Q86SU0 546 aaPredicted RBP17.05■□□□□ 0.32
PDCD10-217ENST00000494502 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
PDCD10-217ENST00000494502 ATMINO43313 823 aaPredicted RBP17.04■□□□□ 0.32
PDCD10-217ENST00000494502 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
PDCD10-217ENST00000494502 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
PDCD10-217ENST00000494502 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
PDCD10-217ENST00000494502 ATN1P54259 1190 aaPredicted RBP17.03■□□□□ 0.32
PDCD10-217ENST00000494502 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
PDCD10-217ENST00000494502 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.312e-6■■■□□ 14.8
PDCD10-217ENST00000494502 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.3
PDCD10-217ENST00000494502 IFT140Q96RY7 1462 aa16.93■□□□□ 0.3
PDCD10-217ENST00000494502 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
PDCD10-217ENST00000494502 IER5LQ5T953 404 aa16.91■□□□□ 0.3
PDCD10-217ENST00000494502 EIF4G3O43432 1585 aaKnown RBP16.89■□□□□ 0.3
PDCD10-217ENST00000494502 TOPBP1Q92547 1522 aa16.89■□□□□ 0.29
PDCD10-217ENST00000494502 IRX5P78411 483 aaPredicted RBP16.88■□□□□ 0.29
PDCD10-217ENST00000494502 SP7Q8TDD2 431 aaPredicted RBP16.88■□□□□ 0.29
PDCD10-217ENST00000494502 PDCD7Q8N8D1 485 aaKnown RBP16.87■□□□□ 0.29
PDCD10-217ENST00000494502 DCBLD2Q96PD2 775 aa16.87■□□□□ 0.29
PDCD10-217ENST00000494502 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
PDCD10-217ENST00000494502 BCANQ96GW7 911 aa16.85■□□□□ 0.29
PDCD10-217ENST00000494502 PELP1Q8IZL8 1130 aaKnown RBP16.84■□□□□ 0.29
PDCD10-217ENST00000494502 CHD1O14646 1710 aa16.84■□□□□ 0.29
PDCD10-217ENST00000494502 OCEL1Q9H607 264 aa16.82■□□□□ 0.28
PDCD10-217ENST00000494502 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
PDCD10-217ENST00000494502 DPY19L2Q6NUT2 758 aa16.81■□□□□ 0.28
PDCD10-217ENST00000494502 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
PDCD10-217ENST00000494502 ABCC8Q09428 1581 aa16.79■□□□□ 0.28
PDCD10-217ENST00000494502 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
PDCD10-217ENST00000494502 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
PDCD10-217ENST00000494502 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
PDCD10-217ENST00000494502 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDCD10-217ENST00000494502 PLCG2P16885 1265 aa16.73■□□□□ 0.27
PDCD10-217ENST00000494502 SLC39A7Q92504 469 aa16.73■□□□□ 0.27
PDCD10-217ENST00000494502 CRISPLD2Q9H0B8 497 aa16.73■□□□□ 0.27
PDCD10-217ENST00000494502 WDR70Q9NW82 654 aa16.73■□□□□ 0.27
PDCD10-217ENST00000494502 CYB5RLQ6IPT4 315 aa16.72■□□□□ 0.27
PDCD10-217ENST00000494502 MICALL2Q8IY33 904 aa16.71■□□□□ 0.27
PDCD10-217ENST00000494502 TMEM121BQ9BXQ6 578 aaPredicted RBP16.7■□□□□ 0.26
PDCD10-217ENST00000494502 COLQQ9Y215 455 aaPredicted RBP16.7■□□□□ 0.26
PDCD10-217ENST00000494502 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
PDCD10-217ENST00000494502 C7P10643 843 aa16.69■□□□□ 0.26
PDCD10-217ENST00000494502 PDE4AP27815 886 aa16.69■□□□□ 0.26
PDCD10-217ENST00000494502 MFSD10Q14728 455 aa16.68■□□□□ 0.26
PDCD10-217ENST00000494502 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
PDCD10-217ENST00000494502 BOLA1Q9Y3E2 137 aa16.67■□□□□ 0.26
PDCD10-217ENST00000494502 POTEFA5A3E0 1075 aa16.66■□□□□ 0.26
PDCD10-217ENST00000494502 SEC24BO95487 1268 aa16.65■□□□□ 0.26
PDCD10-217ENST00000494502 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
PDCD10-217ENST00000494502 METRNQ9UJH8 293 aa16.65■□□□□ 0.26
PDCD10-217ENST00000494502 KCNV2Q8TDN2 545 aa16.64■□□□□ 0.25
PDCD10-217ENST00000494502 RAD54L2Q9Y4B4 1467 aa16.62■□□□□ 0.25
PDCD10-217ENST00000494502 CLASP1Q7Z460 1538 aa16.61■□□□□ 0.25
PDCD10-217ENST00000494502 L3MBTL3Q96JM7 780 aaPredicted RBP16.61■□□□□ 0.25
PDCD10-217ENST00000494502 NBR1Q14596 966 aa16.6■□□□□ 0.25
PDCD10-217ENST00000494502 DDX27Q96GQ7 796 aaKnown RBP16.6■□□□□ 0.25
PDCD10-217ENST00000494502 WDR97A6NE52 1622 aa16.59■□□□□ 0.25
PDCD10-217ENST00000494502 GPHNQ9NQX3 736 aaPredicted RBP16.59■□□□□ 0.25
PDCD10-217ENST00000494502 SNAPC4Q5SXM2 1469 aa16.59■□□□□ 0.25
PDCD10-217ENST00000494502 E2F4Q16254 413 aa16.58■□□□□ 0.24
PDCD10-217ENST00000494502 TDRD9Q8NDG6 1382 aaKnown RBP16.57■□□□□ 0.24
PDCD10-217ENST00000494502 SOGA1O94964 1423 aa16.56■□□□□ 0.24
PDCD10-217ENST00000494502 G3V3G9 751 aa16.56■□□□□ 0.24
PDCD10-217ENST00000494502 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
PDCD10-217ENST00000494502 SYNJ1O43426 1573 aa16.55■□□□□ 0.24
PDCD10-217ENST00000494502 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
PDCD10-217ENST00000494502 CAMK2BQ13554 666 aa16.51■□□□□ 0.23
PDCD10-217ENST00000494502 CUX1P39880 1505 aa16.5■□□□□ 0.23
PDCD10-217ENST00000494502 KIF3CO14782 793 aa16.5■□□□□ 0.23
PDCD10-217ENST00000494502 PPP1R15BQ5SWA1 713 aa16.5■□□□□ 0.23
PDCD10-217ENST00000494502 ARHGEF1Q92888 912 aaKnown RBP16.5■□□□□ 0.23
PDCD10-217ENST00000494502 TMC2Q8TDI7 906 aa16.49■□□□□ 0.23
PDCD10-217ENST00000494502 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
PDCD10-217ENST00000494502 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
PDCD10-217ENST00000494502 DSG2Q14126 1118 aa16.47■□□□□ 0.23
PDCD10-217ENST00000494502 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
PDCD10-217ENST00000494502 FOXK1P85037 733 aa16.46■□□□□ 0.23
PDCD10-217ENST00000494502 TMEM92Q6UXU6 159 aa16.46■□□□□ 0.23
PDCD10-217ENST00000494502 C2orf72A6NCS6 295 aa16.45■□□□□ 0.22
PDCD10-217ENST00000494502 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
PDCD10-217ENST00000494502 ARIH1Q9Y4X5 557 aaPredicted RBP16.45■□□□□ 0.22
PDCD10-217ENST00000494502 GAPVD1Q14C86 1478 aa16.41■□□□□ 0.22
PDCD10-217ENST00000494502 ABCA5Q8WWZ7 1642 aa16.39■□□□□ 0.21
PDCD10-217ENST00000494502 C3orf67Q6ZVT6 689 aa16.37■□□□□ 0.21
PDCD10-217ENST00000494502 PLPP6Q8IY26 295 aa16.36■□□□□ 0.21
PDCD10-217ENST00000494502 EMILIN3Q9NT22 766 aa16.35■□□□□ 0.21
PDCD10-217ENST00000494502 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
PDCD10-217ENST00000494502 ERCC6L2Q5T890 1561 aa16.33■□□□□ 0.2
PDCD10-217ENST00000494502 GRIN2AQ12879 1464 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms