RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 CHRM1P11229 460 aaPredicted RBP10.69□□□□□ -0.7
NCKAP1-207ENST00000493359 STK24Q9Y6E0 443 aa10.69□□□□□ -0.7
NCKAP1-207ENST00000493359 TNIKQ9UKE5 1360 aa10.68□□□□□ -0.7
NCKAP1-207ENST00000493359 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
NCKAP1-207ENST00000493359 RYDENQ9NUL5 291 aaKnown RBP10.68□□□□□ -0.7
NCKAP1-207ENST00000493359 PRXQ9BXM0 1461 aa10.67□□□□□ -0.7
NCKAP1-207ENST00000493359 BCL11BQ9C0K0 894 aaPredicted RBP10.66□□□□□ -0.7
NCKAP1-207ENST00000493359 RAPGEF2Q9Y4G8 1499 aa10.66□□□□□ -0.7
NCKAP1-207ENST00000493359 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
NCKAP1-207ENST00000493359 ABCA5Q8WWZ7 1642 aa10.66□□□□□ -0.7
NCKAP1-207ENST00000493359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.65□□□□□ -0.7
NCKAP1-207ENST00000493359 ZFP91Q96JP5 570 aaPredicted RBP10.65□□□□□ -0.7
NCKAP1-207ENST00000493359 PHF12Q96QT6 1004 aa10.65□□□□□ -0.7
NCKAP1-207ENST00000493359 IFT140Q96RY7 1462 aa10.65□□□□□ -0.7
NCKAP1-207ENST00000493359 CUL7Q14999 1698 aa10.65□□□□□ -0.7
NCKAP1-207ENST00000493359 PYGBP11216 843 aa10.64□□□□□ -0.71
NCKAP1-207ENST00000493359 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
NCKAP1-207ENST00000493359 CEP162Q5TB80 1403 aa10.64□□□□□ -0.71
NCKAP1-207ENST00000493359 GAPVD1Q14C86 1478 aa10.63□□□□□ -0.71
NCKAP1-207ENST00000493359 SGIP1Q9BQI5 828 aa10.63□□□□□ -0.71
NCKAP1-207ENST00000493359 IGF1RP08069 1367 aa10.62□□□□□ -0.71
NCKAP1-207ENST00000493359 GABBR2O75899 941 aa10.61□□□□□ -0.71
NCKAP1-207ENST00000493359 CARMIL1Q5VZK9 1371 aa10.61□□□□□ -0.71
NCKAP1-207ENST00000493359 TDRD9Q8NDG6 1382 aaKnown RBP10.61□□□□□ -0.71
NCKAP1-207ENST00000493359 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
NCKAP1-207ENST00000493359 CCDC61Q9Y6R9 512 aa10.6□□□□□ -0.71
NCKAP1-207ENST00000493359 CLIP1P30622 1438 aa10.57□□□□□ -0.72
NCKAP1-207ENST00000493359 EIF4G3O43432 1585 aaKnown RBP10.56□□□□□ -0.72
NCKAP1-207ENST00000493359 GRIN2BQ13224 1484 aa10.56□□□□□ -0.72
NCKAP1-207ENST00000493359 ADAMTS12P58397 1594 aa10.54□□□□□ -0.72
NCKAP1-207ENST00000493359 AQRO60306 1485 aaKnown RBP eCLIP10.54□□□□□ -0.72
NCKAP1-207ENST00000493359 ZNF608Q9ULD9 1512 aaPredicted RBP10.53□□□□□ -0.72
NCKAP1-207ENST00000493359 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
NCKAP1-207ENST00000493359 FHAD1B1AJZ9 1412 aa10.52□□□□□ -0.73
NCKAP1-207ENST00000493359 P3H3Q8IVL6 736 aa10.52□□□□□ -0.73
NCKAP1-207ENST00000493359 CTTNBP2Q8WZ74 1663 aa10.52□□□□□ -0.73
NCKAP1-207ENST00000493359 RANGAP1P46060 587 aaPredicted RBP10.51□□□□□ -0.73
NCKAP1-207ENST00000493359 ZNF467Q7Z7K2 595 aaPredicted RBP10.51□□□□□ -0.73
NCKAP1-207ENST00000493359 WDR70Q9NW82 654 aa10.51□□□□□ -0.73
NCKAP1-207ENST00000493359 KIF12Q96FN5 646 aa10.5□□□□□ -0.73
NCKAP1-207ENST00000493359 MS4A3Q96HJ5 214 aa10.5□□□□□ -0.73
NCKAP1-207ENST00000493359 SNAPC4Q5SXM2 1469 aa10.49□□□□□ -0.73
NCKAP1-207ENST00000493359 MAP3K13O43283 966 aa10.49□□□□□ -0.73
NCKAP1-207ENST00000493359 VPS8Q8N3P4 1428 aa10.48□□□□□ -0.73
NCKAP1-207ENST00000493359 MAGI1Q96QZ7 1491 aaPredicted RBP10.48□□□□□ -0.73
NCKAP1-207ENST00000493359 CLCN6P51797 869 aa10.46□□□□□ -0.73
NCKAP1-207ENST00000493359 EFCAB5A4FU69 1503 aa10.46□□□□□ -0.74
NCKAP1-207ENST00000493359 ARAP1Q96P48 1450 aa10.45□□□□□ -0.74
NCKAP1-207ENST00000493359 ARHGAP35Q9NRY4 1499 aa10.44□□□□□ -0.74
NCKAP1-207ENST00000493359 PDAP1Q13442 181 aaKnown RBP10.44□□□□□ -0.74
NCKAP1-207ENST00000493359 PCDHB13Q9Y5F0 798 aa10.44□□□□□ -0.74
NCKAP1-207ENST00000493359 SYNJ2O15056 1496 aa10.43□□□□□ -0.74
NCKAP1-207ENST00000493359 GRIN2AQ12879 1464 aa10.43□□□□□ -0.74
NCKAP1-207ENST00000493359 TRPC6Q9Y210 931 aa10.42□□□□□ -0.74
NCKAP1-207ENST00000493359 IQGAP2Q13576 1575 aa10.42□□□□□ -0.74
NCKAP1-207ENST00000493359 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
NCKAP1-207ENST00000493359 POTEIP0CG38 1075 aa10.4□□□□□ -0.74
NCKAP1-207ENST00000493359 IFNL1Q8IU54 200 aa10.4□□□□□ -0.74
NCKAP1-207ENST00000493359 PCDHB8Q9UN66 801 aa10.4□□□□□ -0.74
NCKAP1-207ENST00000493359 CHMP7Q8WUX9 453 aaPredicted RBP10.39□□□□□ -0.75
NCKAP1-207ENST00000493359 TRIM26Q12899 539 aaPredicted RBP10.38□□□□□ -0.75
NCKAP1-207ENST00000493359 SAMD9Q5K651 1589 aa10.38□□□□□ -0.75
NCKAP1-207ENST00000493359 PSEN1P49768 467 aa10.37□□□□□ -0.75
NCKAP1-207ENST00000493359 CADPS2Q86UW7 1296 aa10.37□□□□□ -0.75
NCKAP1-207ENST00000493359 KIAA0586Q9BVV6 1533 aa10.37□□□□□ -0.75
NCKAP1-207ENST00000493359 FHOD3Q2V2M9 1422 aa10.36□□□□□ -0.75
NCKAP1-207ENST00000493359 KCNV2Q8TDN2 545 aa10.36□□□□□ -0.75
NCKAP1-207ENST00000493359 FMN1Q68DA7 1419 aa10.35□□□□□ -0.75
NCKAP1-207ENST00000493359 TULP1O00294 542 aaPredicted RBP10.35□□□□□ -0.75
NCKAP1-207ENST00000493359 CEP170Q5SW79 1584 aa10.35□□□□□ -0.75
NCKAP1-207ENST00000493359 UGGT2Q9NYU1 1516 aa10.34□□□□□ -0.75
NCKAP1-207ENST00000493359 PPARGC1BQ86YN6 1023 aaKnown RBP10.34□□□□□ -0.75
NCKAP1-207ENST00000493359 PCGF6Q9BYE7 350 aa10.34□□□□□ -0.75
NCKAP1-207ENST00000493359 PCF11O94913 1555 aaKnown RBP10.34□□□□□ -0.75
NCKAP1-207ENST00000493359 NUP160Q12769 1436 aa10.33□□□□□ -0.76
NCKAP1-207ENST00000493359 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
NCKAP1-207ENST00000493359 FYCO1Q9BQS8 1478 aa10.33□□□□□ -0.76
NCKAP1-207ENST00000493359 LMOD2Q6P5Q4 547 aa10.32□□□□□ -0.76
NCKAP1-207ENST00000493359 MFRPQ9BY79 579 aa10.32□□□□□ -0.76
NCKAP1-207ENST00000493359 BMP2KQ9NSY1 1161 aaPredicted RBP10.32□□□□□ -0.76
NCKAP1-207ENST00000493359 CHD1O14646 1710 aa10.32□□□□□ -0.76
NCKAP1-207ENST00000493359 TTBK1Q5TCY1 1321 aaPredicted RBP10.32□□□□□ -0.76
NCKAP1-207ENST00000493359 KIAA0556O60303 1618 aa10.3□□□□□ -0.76
NCKAP1-207ENST00000493359 ATMINO43313 823 aaPredicted RBP10.3□□□□□ -0.76
NCKAP1-207ENST00000493359 CFAP43Q8NDM7 1665 aa10.3□□□□□ -0.76
NCKAP1-207ENST00000493359 CASKIN1Q8WXD9 1431 aa10.3□□□□□ -0.76
NCKAP1-207ENST00000493359 TIAM1Q13009 1591 aa10.3□□□□□ -0.76
NCKAP1-207ENST00000493359 MAP3K1Q13233 1512 aa10.29□□□□□ -0.76
NCKAP1-207ENST00000493359 ASTLQ6HA08 431 aaPredicted RBP10.29□□□□□ -0.76
NCKAP1-207ENST00000493359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.29□□□□□ -0.76
NCKAP1-207ENST00000493359 PELP1Q8IZL8 1130 aaKnown RBP10.29□□□□□ -0.76
NCKAP1-207ENST00000493359 CARMIL2Q6F5E8 1435 aa10.28□□□□□ -0.76
NCKAP1-207ENST00000493359 TTLL13PA6NNM8 815 aa10.28□□□□□ -0.76
NCKAP1-207ENST00000493359 TIE1P35590 1138 aa10.28□□□□□ -0.76
NCKAP1-207ENST00000493359 ATN1P54259 1190 aaPredicted RBP10.28□□□□□ -0.76
NCKAP1-207ENST00000493359 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
NCKAP1-207ENST00000493359 ATP1B4Q9UN42 357 aaPredicted RBP10.28□□□□□ -0.76
NCKAP1-207ENST00000493359 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
NCKAP1-207ENST00000493359 NLRP6P59044 892 aa10.27□□□□□ -0.77
NCKAP1-207ENST00000493359 TMEM106CQ9BVX2 250 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms