RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
NCKAP1-207ENST00000493359 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
NCKAP1-207ENST00000493359 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
NCKAP1-207ENST00000493359 SENP3Q9H4L4 574 aaPredicted RBP17.77■□□□□ 0.44
NCKAP1-207ENST00000493359 FOXD1Q16676 465 aa16.56■□□□□ 0.24
NCKAP1-207ENST00000493359 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
NCKAP1-207ENST00000493359 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
NCKAP1-207ENST00000493359 ADRA2BP18089 450 aa15.81■□□□□ 0.12
NCKAP1-207ENST00000493359 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
NCKAP1-207ENST00000493359 MSH5O43196 834 aa15.29■□□□□ 0.04
NCKAP1-207ENST00000493359 NISCHQ9Y2I1 1504 aa15.12■□□□□ 0.01
NCKAP1-207ENST00000493359 POTEDQ86YR6 584 aa14.66□□□□□ -0.06
NCKAP1-207ENST00000493359 KCNA4P22459 653 aa14.6□□□□□ -0.07
NCKAP1-207ENST00000493359 EHMT2Q96KQ7 1210 aa14.46□□□□□ -0.09
NCKAP1-207ENST00000493359 PPP4R3CPQ6ZMV5 832 aa14.44□□□□□ -0.1
NCKAP1-207ENST00000493359 MAPK8IP2Q13387 824 aaPredicted RBP14.41□□□□□ -0.1
NCKAP1-207ENST00000493359 SCAF1Q9H7N4 1312 aaKnown RBP14.37□□□□□ -0.11
NCKAP1-207ENST00000493359 DMRT2Q9Y5R5 561 aa14.17□□□□□ -0.14
NCKAP1-207ENST00000493359 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
NCKAP1-207ENST00000493359 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
NCKAP1-207ENST00000493359 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
NCKAP1-207ENST00000493359 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
NCKAP1-207ENST00000493359 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
NCKAP1-207ENST00000493359 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
NCKAP1-207ENST00000493359 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
NCKAP1-207ENST00000493359 DCAF8L1A6NGE4 600 aa13.65□□□□□ -0.22
NCKAP1-207ENST00000493359 ZBTB22O15209 634 aa13.41□□□□□ -0.26
NCKAP1-207ENST00000493359 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
NCKAP1-207ENST00000493359 FOXD4L1Q9NU39 408 aa13.27□□□□□ -0.29
NCKAP1-207ENST00000493359 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
NCKAP1-207ENST00000493359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
NCKAP1-207ENST00000493359 RNF39Q9H2S5 420 aa13.1□□□□□ -0.31
NCKAP1-207ENST00000493359 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
NCKAP1-207ENST00000493359 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
NCKAP1-207ENST00000493359 CACNB1Q02641 598 aaPredicted RBP12.92□□□□□ -0.34
NCKAP1-207ENST00000493359 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
NCKAP1-207ENST00000493359 MYCNP04198 464 aaPredicted RBP12.76□□□□□ -0.37
NCKAP1-207ENST00000493359 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
NCKAP1-207ENST00000493359 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
NCKAP1-207ENST00000493359 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
NCKAP1-207ENST00000493359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
NCKAP1-207ENST00000493359 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
NCKAP1-207ENST00000493359 CAPN15O75808 1086 aa12.63□□□□□ -0.39
NCKAP1-207ENST00000493359 AMER1Q5JTC6 1135 aaPredicted RBP12.63□□□□□ -0.39
NCKAP1-207ENST00000493359 SAMD1Q6SPF0 538 aaPredicted RBP12.62□□□□□ -0.39
NCKAP1-207ENST00000493359 FKBP8Q14318 412 aa12.59□□□□□ -0.39
NCKAP1-207ENST00000493359 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
NCKAP1-207ENST00000493359 APLP2Q06481 763 aa12.56□□□□□ -0.4
NCKAP1-207ENST00000493359 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
NCKAP1-207ENST00000493359 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.4
NCKAP1-207ENST00000493359 ABCC9O60706 1549 aa12.51□□□□□ -0.41
NCKAP1-207ENST00000493359 SLC24A1O60721 1099 aa12.49□□□□□ -0.41
NCKAP1-207ENST00000493359 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
NCKAP1-207ENST00000493359 ATF5Q9Y2D1 282 aaPredicted RBP12.48□□□□□ -0.41
NCKAP1-207ENST00000493359 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
NCKAP1-207ENST00000493359 DSG3P32926 999 aa12.42□□□□□ -0.42
NCKAP1-207ENST00000493359 ABCB7O75027 752 aa12.41□□□□□ -0.42
NCKAP1-207ENST00000493359 MYO15BQ96JP2 1530 aa12.38□□□□□ -0.43
NCKAP1-207ENST00000493359 NACADO15069 1562 aa12.34□□□□□ -0.43
NCKAP1-207ENST00000493359 SHROOM4Q9ULL8 1493 aa12.32□□□□□ -0.44
NCKAP1-207ENST00000493359 POLA2Q14181 598 aa12.27□□□□□ -0.45
NCKAP1-207ENST00000493359 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
NCKAP1-207ENST00000493359 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
NCKAP1-207ENST00000493359 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
NCKAP1-207ENST00000493359 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
NCKAP1-207ENST00000493359 SPDYE4A6NLX3 237 aa11.94□□□□□ -0.5
NCKAP1-207ENST00000493359 UNC13AQ9UPW8 1703 aa11.93□□□□□ -0.5
NCKAP1-207ENST00000493359 MKRN4PQ13434 485 aaPredicted RBP11.91□□□□□ -0.5
NCKAP1-207ENST00000493359 FBLN2P98095 1184 aa11.9□□□□□ -0.5
NCKAP1-207ENST00000493359 OSCARQ8IYS5 282 aa11.89□□□□□ -0.51
NCKAP1-207ENST00000493359 SUPT5HO00267 1087 aaKnown RBP11.82□□□□□ -0.52
NCKAP1-207ENST00000493359 BICRAQ9NZM4 1560 aa11.8□□□□□ -0.52
NCKAP1-207ENST00000493359 RBM42Q9BTD8 480 aaKnown RBP11.8□□□□□ -0.52
NCKAP1-207ENST00000493359 VASPP50552 380 aaPredicted RBP11.75□□□□□ -0.53
NCKAP1-207ENST00000493359 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
NCKAP1-207ENST00000493359 PROM2Q8N271 834 aa11.73□□□□□ -0.53
NCKAP1-207ENST00000493359 BAZ1AQ9NRL2 1556 aaPredicted RBP11.72□□□□□ -0.53
NCKAP1-207ENST00000493359 CECR2Q9BXF3 1484 aa11.7□□□□□ -0.54
NCKAP1-207ENST00000493359 RSF1Q96T23 1441 aaPredicted RBP11.69□□□□□ -0.54
NCKAP1-207ENST00000493359 MROH2BQ7Z745 1585 aa11.67□□□□□ -0.54
NCKAP1-207ENST00000493359 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
NCKAP1-207ENST00000493359 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
NCKAP1-207ENST00000493359 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
NCKAP1-207ENST00000493359 SMARCA4P51532 1647 aa11.66□□□□□ -0.54
NCKAP1-207ENST00000493359 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
NCKAP1-207ENST00000493359 ZNF692Q9BU19 519 aaPredicted RBP11.63□□□□□ -0.55
NCKAP1-207ENST00000493359 PLCB2Q00722 1185 aa11.62□□□□□ -0.55
NCKAP1-207ENST00000493359 AKT1S1Q96B36 256 aa11.62□□□□□ -0.55
NCKAP1-207ENST00000493359 WIZO95785 1651 aa11.58□□□□□ -0.56
NCKAP1-207ENST00000493359 SSUH2Q9Y2M2 353 aa11.56□□□□□ -0.56
NCKAP1-207ENST00000493359 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
NCKAP1-207ENST00000493359 HAP1P54257 671 aaPredicted RBP11.52□□□□□ -0.57
NCKAP1-207ENST00000493359 TOP2AP11388 1531 aaKnown RBP11.5□□□□□ -0.57
NCKAP1-207ENST00000493359 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
NCKAP1-207ENST00000493359 KLHL34Q8N239 644 aa11.49□□□□□ -0.57
NCKAP1-207ENST00000493359 SMARCA2P51531 1590 aa11.49□□□□□ -0.57
NCKAP1-207ENST00000493359 PEG3Q9GZU2 1588 aa11.49□□□□□ -0.57
NCKAP1-207ENST00000493359 PKD2Q13563 968 aa11.48□□□□□ -0.57
NCKAP1-207ENST00000493359 PITPNM1O00562 1244 aa11.45□□□□□ -0.58
NCKAP1-207ENST00000493359 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms