RNA–Protein interactions for RNA: ENST00000490166.1

RPN1-205, Transcript of ribophorin I, humanhuman

TSL 3

Gene RPN1, Length 573 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-205ENST00000490166 OCEL1Q9H607 264 aa6.99□□□□□ -1.29
RPN1-205ENST00000490166 IRX5P78411 483 aaPredicted RBP6.98□□□□□ -1.29
RPN1-205ENST00000490166 POTEFA5A3E0 1075 aa6.97□□□□□ -1.29
RPN1-205ENST00000490166 STK25O00506 426 aa6.97□□□□□ -1.29
RPN1-205ENST00000490166 BCL11BQ9C0K0 894 aaPredicted RBP6.97□□□□□ -1.29
RPN1-205ENST00000490166 COLQQ9Y215 455 aaPredicted RBP6.97□□□□□ -1.29
RPN1-205ENST00000490166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.96□□□□□ -1.3
RPN1-205ENST00000490166 STK24Q9Y6E0 443 aa6.96□□□□□ -1.3
RPN1-205ENST00000490166 SOX12O15370 315 aa6.95□□□□□ -1.3
RPN1-205ENST00000490166 EFCAB3Q8N7B9 438 aa6.95□□□□□ -1.3
RPN1-205ENST00000490166 IFT140Q96RY7 1462 aa6.95□□□□□ -1.3
RPN1-205ENST00000490166 POTEB2H3BUK9 544 aa6.94□□□□□ -1.3
RPN1-205ENST00000490166 MAMSTRQ6ZN01 415 aa6.94□□□□□ -1.3
RPN1-205ENST00000490166 ILDR1Q86SU0 546 aaPredicted RBP6.94□□□□□ -1.3
RPN1-205ENST00000490166 TOPBP1Q92547 1522 aa6.94□□□□□ -1.3
RPN1-205ENST00000490166 PRDM2Q13029 1718 aa6.93□□□□□ -1.3
RPN1-205ENST00000490166 ZNF608Q9ULD9 1512 aaPredicted RBP6.93□□□□□ -1.3
RPN1-205ENST00000490166 EIF4G3O43432 1585 aaKnown RBP6.92□□□□□ -1.3
RPN1-205ENST00000490166 DNMBPQ6XZF7 1577 aa6.92□□□□□ -1.3
RPN1-205ENST00000490166 HS6ST3Q8IZP7 471 aa6.92□□□□□ -1.3
RPN1-205ENST00000490166 CHGAP10645 457 aaKnown RBP6.91□□□□□ -1.3
RPN1-205ENST00000490166 PDCD7Q8N8D1 485 aaKnown RBP6.91□□□□□ -1.3
RPN1-205ENST00000490166 L3MBTL3Q96JM7 780 aaPredicted RBP6.91□□□□□ -1.3
RPN1-205ENST00000490166 NLRP6P59044 892 aa6.9□□□□□ -1.3
RPN1-205ENST00000490166 PLCB2Q00722 1185 aa6.9□□□□□ -1.3
RPN1-205ENST00000490166 SCUBE2Q9NQ36 999 aa6.9□□□□□ -1.3
RPN1-205ENST00000490166 ABCC8Q09428 1581 aa6.9□□□□□ -1.31
RPN1-205ENST00000490166 POTEJP0CG39 1038 aa6.89□□□□□ -1.31
RPN1-205ENST00000490166 AQRO60306 1485 aaKnown RBP eCLIP6.89□□□□□ -1.311e-7■■□□□ 13.6
RPN1-205ENST00000490166 RAD54L2Q9Y4B4 1467 aa6.88□□□□□ -1.31
RPN1-205ENST00000490166 TDRD9Q8NDG6 1382 aaKnown RBP6.88□□□□□ -1.31
RPN1-205ENST00000490166 BBXQ8WY36 941 aaPredicted RBP6.88□□□□□ -1.31
RPN1-205ENST00000490166 OTUD5Q96G74 571 aa6.88□□□□□ -1.31
RPN1-205ENST00000490166 PHF8Q9UPP1 1060 aa6.88□□□□□ -1.31
RPN1-205ENST00000490166 POLA1P09884 1462 aaPredicted RBP6.87□□□□□ -1.31
RPN1-205ENST00000490166 FGD5Q6ZNL6 1462 aa6.87□□□□□ -1.31
RPN1-205ENST00000490166 SOGA1O94964 1423 aa6.87□□□□□ -1.31
RPN1-205ENST00000490166 G3V3G9 751 aa6.87□□□□□ -1.31
RPN1-205ENST00000490166 CHMP7Q8WUX9 453 aaPredicted RBP6.87□□□□□ -1.31
RPN1-205ENST00000490166 SNAPC4Q5SXM2 1469 aa6.86□□□□□ -1.31
RPN1-205ENST00000490166 CYB5RLQ6IPT4 315 aa6.86□□□□□ -1.31
RPN1-205ENST00000490166 DPY19L2Q6NUT2 758 aa6.86□□□□□ -1.31
RPN1-205ENST00000490166 FBXO22Q8NEZ5 403 aa6.85□□□□□ -1.31
RPN1-205ENST00000490166 MFRPQ9BY79 579 aa6.85□□□□□ -1.31
RPN1-205ENST00000490166 BOLA1Q9Y3E2 137 aa6.85□□□□□ -1.31
RPN1-205ENST00000490166 RIMBP3CA6NJZ7 1639 aa6.84□□□□□ -1.31
RPN1-205ENST00000490166 RIMBP3BA6NNM3 1639 aa6.84□□□□□ -1.31
RPN1-205ENST00000490166 RIMBP3Q9UFD9 1639 aa6.84□□□□□ -1.31
RPN1-205ENST00000490166 RYDENQ9NUL5 291 aaKnown RBP6.84□□□□□ -1.31
RPN1-205ENST00000490166 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.84□□□□□ -1.31
RPN1-205ENST00000490166 CHD1O14646 1710 aa6.84□□□□□ -1.31
RPN1-205ENST00000490166 ARHGEF11O15085 1522 aa6.83□□□□□ -1.32
RPN1-205ENST00000490166 C3orf67Q6ZVT6 689 aa6.83□□□□□ -1.32
RPN1-205ENST00000490166 MS4A4AQ96JQ5 239 aa6.83□□□□□ -1.32
RPN1-205ENST00000490166 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.83□□□□□ -1.32
RPN1-205ENST00000490166 CUX1P39880 1505 aa6.81□□□□□ -1.32
RPN1-205ENST00000490166 TTBK1Q5TCY1 1321 aaPredicted RBP6.81□□□□□ -1.32
RPN1-205ENST00000490166 TARBP1Q13395 1621 aaKnown RBP6.81□□□□□ -1.32
RPN1-205ENST00000490166 TMEM121BQ9BXQ6 578 aaPredicted RBP6.81□□□□□ -1.32
RPN1-205ENST00000490166 GRIN2BQ13224 1484 aa6.8□□□□□ -1.32
RPN1-205ENST00000490166 SYNJ1O43426 1573 aa6.8□□□□□ -1.32
RPN1-205ENST00000490166 SLAIN1Q8ND83 568 aa6.8□□□□□ -1.32
RPN1-205ENST00000490166 MICALL2Q8IY33 904 aa6.79□□□□□ -1.32
RPN1-205ENST00000490166 GAPVD1Q14C86 1478 aa6.79□□□□□ -1.32
RPN1-205ENST00000490166 NKX1-1Q15270 411 aaPredicted RBP6.78□□□□□ -1.32
RPN1-205ENST00000490166 PBRM1Q86U86 1689 aa6.77□□□□□ -1.32
RPN1-205ENST00000490166 WRNQ14191 1432 aaPredicted RBP eCLIP6.77□□□□□ -1.33
RPN1-205ENST00000490166 SYNJ2O15056 1496 aa6.77□□□□□ -1.33
RPN1-205ENST00000490166 MAGI1Q96QZ7 1491 aaPredicted RBP6.77□□□□□ -1.33
RPN1-205ENST00000490166 ARAP1Q96P48 1450 aa6.75□□□□□ -1.33
RPN1-205ENST00000490166 SPRYD3Q8NCJ5 442 aa6.75□□□□□ -1.33
RPN1-205ENST00000490166 PAXIP1Q6ZW49 1069 aaPredicted RBP6.74□□□□□ -1.33
RPN1-205ENST00000490166 WDR97A6NE52 1622 aa6.73□□□□□ -1.33
RPN1-205ENST00000490166 SNPHO15079 494 aa6.73□□□□□ -1.33
RPN1-205ENST00000490166 GTPBP6O43824 516 aaPredicted RBP6.73□□□□□ -1.33
RPN1-205ENST00000490166 PPP1R37O75864 691 aa6.73□□□□□ -1.33
RPN1-205ENST00000490166 HAP1P54257 671 aaPredicted RBP6.73□□□□□ -1.33
RPN1-205ENST00000490166 ABCA10Q8WWZ4 1543 aa6.72□□□□□ -1.33
RPN1-205ENST00000490166 ADAMTS12P58397 1594 aa6.72□□□□□ -1.33
RPN1-205ENST00000490166 ABCA5Q8WWZ7 1642 aa6.72□□□□□ -1.33
RPN1-205ENST00000490166 VSIG10Q8N0Z9 540 aa6.71□□□□□ -1.34
RPN1-205ENST00000490166 CFAP44Q96MT7 982 aa6.71□□□□□ -1.34
RPN1-205ENST00000490166 GRIN2AQ12879 1464 aa6.71□□□□□ -1.34
RPN1-205ENST00000490166 CLASP1Q7Z460 1538 aa6.71□□□□□ -1.34
RPN1-205ENST00000490166 TOP2BQ02880 1626 aa6.7□□□□□ -1.34
RPN1-205ENST00000490166 BIVM-ERCC5R4GMW8 1640 aa6.68□□□□□ -1.34
RPN1-205ENST00000490166 FHAD1B1AJZ9 1412 aa6.68□□□□□ -1.34
RPN1-205ENST00000490166 TMEM92Q6UXU6 159 aa6.68□□□□□ -1.34
RPN1-205ENST00000490166 TMC2Q8TDI7 906 aa6.68□□□□□ -1.34
RPN1-205ENST00000490166 FAM163AQ96GL9 167 aaPredicted RBP6.68□□□□□ -1.34
RPN1-205ENST00000490166 CEP170Q5SW79 1584 aa6.67□□□□□ -1.34
RPN1-205ENST00000490166 KIF3CO14782 793 aa6.66□□□□□ -1.34
RPN1-205ENST00000490166 KIF27Q86VH2 1401 aa6.66□□□□□ -1.34
RPN1-205ENST00000490166 PRG4Q92954 1404 aaPredicted RBP6.66□□□□□ -1.34
RPN1-205ENST00000490166 ERCC6L2Q5T890 1561 aa6.65□□□□□ -1.34
RPN1-205ENST00000490166 C2orf72A6NCS6 295 aa6.65□□□□□ -1.34
RPN1-205ENST00000490166 DOK7Q18PE1 504 aa6.65□□□□□ -1.34
RPN1-205ENST00000490166 RIMBP2O15034 1052 aa6.64□□□□□ -1.35
RPN1-205ENST00000490166 RANGAP1P46060 587 aaPredicted RBP6.64□□□□□ -1.35
RPN1-205ENST00000490166 GPHNQ9NQX3 736 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms