RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 TTLL13PA6NNM8 815 aa13.43□□□□□ -0.26
NECTIN3-209ENST00000488016 C7P10643 843 aa13.43□□□□□ -0.26
NECTIN3-209ENST00000488016 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
NECTIN3-209ENST00000488016 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
NECTIN3-209ENST00000488016 GAPVD1Q14C86 1478 aa13.42□□□□□ -0.26
NECTIN3-209ENST00000488016 CHD1O14646 1710 aa13.42□□□□□ -0.26
NECTIN3-209ENST00000488016 CHRM1P11229 460 aaPredicted RBP13.4□□□□□ -0.26
NECTIN3-209ENST00000488016 ZNF467Q7Z7K2 595 aaPredicted RBP13.39□□□□□ -0.27
NECTIN3-209ENST00000488016 TMEM106CQ9BVX2 250 aa13.39□□□□□ -0.27
NECTIN3-209ENST00000488016 PCDHB8Q9UN66 801 aa13.39□□□□□ -0.27
NECTIN3-209ENST00000488016 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
NECTIN3-209ENST00000488016 TRIM35Q9UPQ4 493 aa13.35□□□□□ -0.27
NECTIN3-209ENST00000488016 MAGI1Q96QZ7 1491 aaPredicted RBP13.34□□□□□ -0.27
NECTIN3-209ENST00000488016 ARAP1Q96P48 1450 aa13.33□□□□□ -0.28
NECTIN3-209ENST00000488016 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
NECTIN3-209ENST00000488016 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
NECTIN3-209ENST00000488016 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
NECTIN3-209ENST00000488016 SEC24BO95487 1268 aa13.29□□□□□ -0.28
NECTIN3-209ENST00000488016 IER5LQ5T953 404 aa13.29□□□□□ -0.28
NECTIN3-209ENST00000488016 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
NECTIN3-209ENST00000488016 ERICH3Q5RHP9 1530 aa13.27□□□□□ -0.29
NECTIN3-209ENST00000488016 POTEB2H3BUK9 544 aa13.26□□□□□ -0.29
NECTIN3-209ENST00000488016 KIF27Q86VH2 1401 aa13.26□□□□□ -0.29
NECTIN3-209ENST00000488016 GRIN2AQ12879 1464 aa13.25□□□□□ -0.29
NECTIN3-209ENST00000488016 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
NECTIN3-209ENST00000488016 FHAD1B1AJZ9 1412 aa13.24□□□□□ -0.29
NECTIN3-209ENST00000488016 PSEN1P49768 467 aa13.24□□□□□ -0.29
NECTIN3-209ENST00000488016 IGF1RP08069 1367 aa13.23□□□□□ -0.29
NECTIN3-209ENST00000488016 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
NECTIN3-209ENST00000488016 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
NECTIN3-209ENST00000488016 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
NECTIN3-209ENST00000488016 POTEFA5A3E0 1075 aa13.19□□□□□ -0.3
NECTIN3-209ENST00000488016 PLCG2P16885 1265 aa13.19□□□□□ -0.3
NECTIN3-209ENST00000488016 MAMSTRQ6ZN01 415 aa13.19□□□□□ -0.3
NECTIN3-209ENST00000488016 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
NECTIN3-209ENST00000488016 NUP160Q12769 1436 aa13.18□□□□□ -0.3
NECTIN3-209ENST00000488016 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
NECTIN3-209ENST00000488016 CUL7Q14999 1698 aa13.16□□□□□ -0.3
NECTIN3-209ENST00000488016 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
NECTIN3-209ENST00000488016 MKRN3Q13064 507 aaKnown RBP13.15□□□□□ -0.3
NECTIN3-209ENST00000488016 CARMIL1Q5VZK9 1371 aa13.15□□□□□ -0.3
NECTIN3-209ENST00000488016 SCUBE2Q9NQ36 999 aa13.14□□□□□ -0.31
NECTIN3-209ENST00000488016 IRX5P78411 483 aaPredicted RBP13.13□□□□□ -0.31
NECTIN3-209ENST00000488016 POTEJP0CG39 1038 aa13.12□□□□□ -0.31
NECTIN3-209ENST00000488016 RIOK3O14730 519 aaKnown RBP13.11□□□□□ -0.31
NECTIN3-209ENST00000488016 FAM9AQ8IZU1 332 aaPredicted RBP13.11□□□□□ -0.31
NECTIN3-209ENST00000488016 OCEL1Q9H607 264 aa13.11□□□□□ -0.31
NECTIN3-209ENST00000488016 ILDR1Q86SU0 546 aaPredicted RBP13.1□□□□□ -0.31
NECTIN3-209ENST00000488016 CABP2Q9NPB3 220 aa13.09□□□□□ -0.31
NECTIN3-209ENST00000488016 SHROOM2Q13796 1616 aa13.08□□□□□ -0.32
NECTIN3-209ENST00000488016 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
NECTIN3-209ENST00000488016 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
NECTIN3-209ENST00000488016 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
NECTIN3-209ENST00000488016 RNF25Q96BH1 459 aaPredicted RBP13.05□□□□□ -0.32
NECTIN3-209ENST00000488016 PRG4Q92954 1404 aaPredicted RBP13.05□□□□□ -0.32
NECTIN3-209ENST00000488016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.04□□□□□ -0.32
NECTIN3-209ENST00000488016 TAOK2Q9UL54 1235 aa13.04□□□□□ -0.32
NECTIN3-209ENST00000488016 PRXQ9BXM0 1461 aa13.04□□□□□ -0.32
NECTIN3-209ENST00000488016 JPH4Q96JJ6 628 aa13.03□□□□□ -0.32
NECTIN3-209ENST00000488016 KIAA0586Q9BVV6 1533 aa13.03□□□□□ -0.32
NECTIN3-209ENST00000488016 IQGAP2Q13576 1575 aa12.99□□□□□ -0.33
NECTIN3-209ENST00000488016 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
NECTIN3-209ENST00000488016 PKD2Q13563 968 aa12.99□□□□□ -0.33
NECTIN3-209ENST00000488016 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
NECTIN3-209ENST00000488016 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
NECTIN3-209ENST00000488016 PDCD7Q8N8D1 485 aaKnown RBP12.98□□□□□ -0.33
NECTIN3-209ENST00000488016 EEA1Q15075 1411 aa12.96□□□□□ -0.34
NECTIN3-209ENST00000488016 CTTNBP2Q8WZ74 1663 aa12.96□□□□□ -0.34
NECTIN3-209ENST00000488016 L3MBTL3Q96JM7 780 aaPredicted RBP12.95□□□□□ -0.34
NECTIN3-209ENST00000488016 EFCAB3Q8N7B9 438 aa12.94□□□□□ -0.34
NECTIN3-209ENST00000488016 DISP1Q96F81 1524 aa12.93□□□□□ -0.34
NECTIN3-209ENST00000488016 SLAIN1Q8ND83 568 aa12.92□□□□□ -0.34
NECTIN3-209ENST00000488016 G3V3G9 751 aa12.91□□□□□ -0.34
NECTIN3-209ENST00000488016 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
NECTIN3-209ENST00000488016 UGGT2Q9NYU1 1516 aa12.91□□□□□ -0.34
NECTIN3-209ENST00000488016 RGL2O15211 777 aa12.9□□□□□ -0.34
NECTIN3-209ENST00000488016 BCL11BQ9C0K0 894 aaPredicted RBP12.9□□□□□ -0.34
NECTIN3-209ENST00000488016 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
NECTIN3-209ENST00000488016 KIAA0556O60303 1618 aa12.9□□□□□ -0.34
NECTIN3-209ENST00000488016 KIF21BO75037 1637 aa12.9□□□□□ -0.34
NECTIN3-209ENST00000488016 C3orf67Q6ZVT6 689 aa12.89□□□□□ -0.35
NECTIN3-209ENST00000488016 KDM4FA0A1W2PPD8 638 aa12.88□□□□□ -0.35
NECTIN3-209ENST00000488016 STK24Q9Y6E0 443 aa12.88□□□□□ -0.35
NECTIN3-209ENST00000488016 STK25O00506 426 aa12.87□□□□□ -0.35
NECTIN3-209ENST00000488016 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
NECTIN3-209ENST00000488016 SOX12O15370 315 aa12.86□□□□□ -0.35
NECTIN3-209ENST00000488016 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
NECTIN3-209ENST00000488016 PTPRGP23470 1445 aa12.86□□□□□ -0.35
NECTIN3-209ENST00000488016 CARMIL2Q6F5E8 1435 aa12.86□□□□□ -0.35
NECTIN3-209ENST00000488016 TNIKQ9UKE5 1360 aa12.85□□□□□ -0.35
NECTIN3-209ENST00000488016 DPY19L2Q6NUT2 758 aa12.84□□□□□ -0.35
NECTIN3-209ENST00000488016 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
NECTIN3-209ENST00000488016 GOLGA3Q08378 1498 aa12.83□□□□□ -0.36
NECTIN3-209ENST00000488016 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
NECTIN3-209ENST00000488016 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
NECTIN3-209ENST00000488016 KIF13AQ9H1H9 1805 aa12.8□□□□□ -0.36
NECTIN3-209ENST00000488016 SAMD9Q5K651 1589 aa12.8□□□□□ -0.36
NECTIN3-209ENST00000488016 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
NECTIN3-209ENST00000488016 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
NECTIN3-209ENST00000488016 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms