RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 POTEB3A0JP26 581 aa9.63□□□□□ -0.87
COPS3-208ENST00000486032 POTEBQ6S5H4 581 aa9.63□□□□□ -0.87
COPS3-208ENST00000486032 IFNL1Q8IU54 200 aa9.63□□□□□ -0.87
COPS3-208ENST00000486032 AQRO60306 1485 aaKnown RBP eCLIP9.61□□□□□ -0.873e-7■■■■■ 36.6
COPS3-208ENST00000486032 IFT140Q96RY7 1462 aa9.61□□□□□ -0.87
COPS3-208ENST00000486032 WDR97A6NE52 1622 aa9.61□□□□□ -0.87
COPS3-208ENST00000486032 BIVM-ERCC5R4GMW8 1640 aa9.59□□□□□ -0.87
COPS3-208ENST00000486032 MIER1Q8N108 512 aa9.58□□□□□ -0.88
COPS3-208ENST00000486032 DNAJC5Q9H3Z4 198 aa9.58□□□□□ -0.88
COPS3-208ENST00000486032 TDRD9Q8NDG6 1382 aaKnown RBP9.58□□□□□ -0.88
COPS3-208ENST00000486032 SOGA1O94964 1423 aa9.57□□□□□ -0.88
COPS3-208ENST00000486032 TOP2BQ02880 1626 aa9.56□□□□□ -0.88
COPS3-208ENST00000486032 RNF166Q96A37 237 aaPredicted RBP9.56□□□□□ -0.88
COPS3-208ENST00000486032 WRNQ14191 1432 aaPredicted RBP eCLIP9.56□□□□□ -0.88
COPS3-208ENST00000486032 CHD1O14646 1710 aa9.53□□□□□ -0.88
COPS3-208ENST00000486032 ABCA5Q8WWZ7 1642 aa9.53□□□□□ -0.88
COPS3-208ENST00000486032 C3orf67Q6ZVT6 689 aa9.53□□□□□ -0.88
COPS3-208ENST00000486032 PBRM1Q86U86 1689 aa9.52□□□□□ -0.89
COPS3-208ENST00000486032 PROM2Q8N271 834 aa9.52□□□□□ -0.89
COPS3-208ENST00000486032 SNAPC4Q5SXM2 1469 aa9.52□□□□□ -0.89
COPS3-208ENST00000486032 TRIM41Q8WV44 630 aa9.51□□□□□ -0.89
COPS3-208ENST00000486032 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
COPS3-208ENST00000486032 GAPVD1Q14C86 1478 aa9.47□□□□□ -0.89
COPS3-208ENST00000486032 L3MBTL3Q96JM7 780 aaPredicted RBP9.46□□□□□ -0.9
COPS3-208ENST00000486032 MYT1LQ9UL68 1186 aa9.45□□□□□ -0.9
COPS3-208ENST00000486032 GRIN2BQ13224 1484 aa9.45□□□□□ -0.9
COPS3-208ENST00000486032 ADAMTS12P58397 1594 aa9.44□□□□□ -0.9
COPS3-208ENST00000486032 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
COPS3-208ENST00000486032 NUBP1P53384 320 aa9.43□□□□□ -0.9
COPS3-208ENST00000486032 FAM212AQ96EL1 285 aa9.42□□□□□ -0.9
COPS3-208ENST00000486032 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
COPS3-208ENST00000486032 PLCD3Q8N3E9 789 aa9.41□□□□□ -0.9
COPS3-208ENST00000486032 PDCD7Q8N8D1 485 aaKnown RBP9.41□□□□□ -0.9
COPS3-208ENST00000486032 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
COPS3-208ENST00000486032 RIMBP3CA6NJZ7 1639 aa9.41□□□□□ -0.9
COPS3-208ENST00000486032 RIMBP3BA6NNM3 1639 aa9.41□□□□□ -0.9
COPS3-208ENST00000486032 RIMBP3Q9UFD9 1639 aa9.41□□□□□ -0.9
COPS3-208ENST00000486032 MAGI1Q96QZ7 1491 aaPredicted RBP9.4□□□□□ -0.9
COPS3-208ENST00000486032 SYNJ2O15056 1496 aa9.4□□□□□ -0.91
COPS3-208ENST00000486032 CEP170Q5SW79 1584 aa9.39□□□□□ -0.91
COPS3-208ENST00000486032 FAM9AQ8IZU1 332 aaPredicted RBP9.39□□□□□ -0.91
COPS3-208ENST00000486032 CSRNP3Q8WYN3 585 aa9.39□□□□□ -0.91
COPS3-208ENST00000486032 ERCC6L2Q5T890 1561 aa9.38□□□□□ -0.91
COPS3-208ENST00000486032 ERBB3P21860 1342 aa9.38□□□□□ -0.91
COPS3-208ENST00000486032 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
COPS3-208ENST00000486032 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
COPS3-208ENST00000486032 ERICH3Q5RHP9 1530 aa9.36□□□□□ -0.91
COPS3-208ENST00000486032 HOXB1P14653 301 aaPredicted RBP9.35□□□□□ -0.91
COPS3-208ENST00000486032 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
COPS3-208ENST00000486032 IGF1RP08069 1367 aa9.34□□□□□ -0.91
COPS3-208ENST00000486032 ARAP1Q96P48 1450 aa9.34□□□□□ -0.91
COPS3-208ENST00000486032 FHAD1B1AJZ9 1412 aa9.33□□□□□ -0.92
COPS3-208ENST00000486032 KIF27Q86VH2 1401 aa9.33□□□□□ -0.92
COPS3-208ENST00000486032 GOLGA2Q08379 1002 aa9.33□□□□□ -0.92
COPS3-208ENST00000486032 MKRN3Q13064 507 aaKnown RBP9.33□□□□□ -0.92
COPS3-208ENST00000486032 CHMP7Q8WUX9 453 aaPredicted RBP9.33□□□□□ -0.92
COPS3-208ENST00000486032 NUP160Q12769 1436 aa9.32□□□□□ -0.92
COPS3-208ENST00000486032 HOXB3P14651 431 aaPredicted RBP9.32□□□□□ -0.92
COPS3-208ENST00000486032 PTGER2P43116 358 aa9.32□□□□□ -0.92
COPS3-208ENST00000486032 EHMT2Q96KQ7 1210 aa9.32□□□□□ -0.92
COPS3-208ENST00000486032 PCDHB8Q9UN66 801 aa9.31□□□□□ -0.92
COPS3-208ENST00000486032 PYGBP11216 843 aa9.29□□□□□ -0.92
COPS3-208ENST00000486032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.29□□□□□ -0.92
COPS3-208ENST00000486032 CUL7Q14999 1698 aa9.29□□□□□ -0.92
COPS3-208ENST00000486032 SHROOM2Q13796 1616 aa9.28□□□□□ -0.92
COPS3-208ENST00000486032 DOK7Q18PE1 504 aa9.27□□□□□ -0.93
COPS3-208ENST00000486032 VARS2Q5ST30 1063 aaKnown RBP9.27□□□□□ -0.93
COPS3-208ENST00000486032 CARMIL1Q5VZK9 1371 aa9.25□□□□□ -0.93
COPS3-208ENST00000486032 EEA1Q15075 1411 aa9.24□□□□□ -0.93
COPS3-208ENST00000486032 DCAF8Q5TAQ9 597 aa9.24□□□□□ -0.93
COPS3-208ENST00000486032 CYB5RLQ6IPT4 315 aa9.24□□□□□ -0.93
COPS3-208ENST00000486032 ZNF687Q8N1G0 1237 aa9.24□□□□□ -0.93
COPS3-208ENST00000486032 G3V3G9 751 aa9.23□□□□□ -0.93
COPS3-208ENST00000486032 RIMBP2O15034 1052 aa9.21□□□□□ -0.94
COPS3-208ENST00000486032 PRG4Q92954 1404 aaPredicted RBP9.21□□□□□ -0.94
COPS3-208ENST00000486032 PRXQ9BXM0 1461 aa9.21□□□□□ -0.94
COPS3-208ENST00000486032 PLA2G2EQ9NZK7 142 aa9.2□□□□□ -0.94
COPS3-208ENST00000486032 RAPGEF2Q9Y4G8 1499 aa9.2□□□□□ -0.94
COPS3-208ENST00000486032 KIAA0586Q9BVV6 1533 aa9.19□□□□□ -0.94
COPS3-208ENST00000486032 RANGAP1P46060 587 aaPredicted RBP9.18□□□□□ -0.94
COPS3-208ENST00000486032 IQGAP2Q13576 1575 aa9.17□□□□□ -0.94
COPS3-208ENST00000486032 UBTFP17480 764 aaKnown RBP9.17□□□□□ -0.94
COPS3-208ENST00000486032 JPH4Q96JJ6 628 aa9.17□□□□□ -0.94
COPS3-208ENST00000486032 BOLA1Q9Y3E2 137 aa9.17□□□□□ -0.94
COPS3-208ENST00000486032 CTTNBP2Q8WZ74 1663 aa9.16□□□□□ -0.94
COPS3-208ENST00000486032 DISP1Q96F81 1524 aa9.16□□□□□ -0.94
COPS3-208ENST00000486032 DPY19L2Q6NUT2 758 aa9.16□□□□□ -0.94
COPS3-208ENST00000486032 ANKRD13DQ6ZTN6 518 aa9.16□□□□□ -0.94
COPS3-208ENST00000486032 ZNF467Q7Z7K2 595 aaPredicted RBP9.16□□□□□ -0.94
COPS3-208ENST00000486032 ILDR1Q86SU0 546 aaPredicted RBP9.16□□□□□ -0.94
COPS3-208ENST00000486032 LOC105371045A0A1W2PR82 267 aa9.15□□□□□ -0.94
COPS3-208ENST00000486032 KIF21BO75037 1637 aa9.13□□□□□ -0.95
COPS3-208ENST00000486032 ADCY10Q96PN6 1610 aa9.13□□□□□ -0.95
COPS3-208ENST00000486032 TTBK1Q5TCY1 1321 aaPredicted RBP9.13□□□□□ -0.95
COPS3-208ENST00000486032 ZSWIM6Q9HCJ5 1215 aa9.13□□□□□ -0.95
COPS3-208ENST00000486032 GOLGA3Q08378 1498 aa9.13□□□□□ -0.95
COPS3-208ENST00000486032 KIAA0556O60303 1618 aa9.13□□□□□ -0.95
COPS3-208ENST00000486032 UGGT2Q9NYU1 1516 aa9.12□□□□□ -0.95
COPS3-208ENST00000486032 PSEN1P49768 467 aa9.1□□□□□ -0.95
COPS3-208ENST00000486032 P3H3Q8IVL6 736 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms