RNA–Protein interactions for RNA: ENST00000485607.1

CLRN1-206, Transcript of clarin 1, humanhuman

TSL 1 (best)

Gene CLRN1, Length 704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-206ENST00000485607 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
CLRN1-206ENST00000485607 ABCC8Q09428 1581 aa13.58□□□□□ -0.23
CLRN1-206ENST00000485607 ST18O60284 1047 aa13.58□□□□□ -0.24
CLRN1-206ENST00000485607 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
CLRN1-206ENST00000485607 EIF4G3O43432 1585 aaKnown RBP13.58□□□□□ -0.24
CLRN1-206ENST00000485607 MKRN3Q13064 507 aaKnown RBP13.57□□□□□ -0.24
CLRN1-206ENST00000485607 TARBP1Q13395 1621 aaKnown RBP13.56□□□□□ -0.24
CLRN1-206ENST00000485607 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-206ENST00000485607 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLRN1-206ENST00000485607 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
CLRN1-206ENST00000485607 SNPHO15079 494 aa13.51□□□□□ -0.25
CLRN1-206ENST00000485607 PSEN1P49768 467 aa13.49□□□□□ -0.25
CLRN1-206ENST00000485607 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
CLRN1-206ENST00000485607 RIMBP3CA6NJZ7 1639 aa13.49□□□□□ -0.25
CLRN1-206ENST00000485607 RIMBP3BA6NNM3 1639 aa13.49□□□□□ -0.25
CLRN1-206ENST00000485607 RIMBP3Q9UFD9 1639 aa13.49□□□□□ -0.25
CLRN1-206ENST00000485607 CHRM1P11229 460 aaPredicted RBP13.48□□□□□ -0.25
CLRN1-206ENST00000485607 C3orf67Q6ZVT6 689 aa13.48□□□□□ -0.25
CLRN1-206ENST00000485607 CUX1P39880 1505 aa13.48□□□□□ -0.25
CLRN1-206ENST00000485607 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLRN1-206ENST00000485607 FGD5Q6ZNL6 1462 aa13.47□□□□□ -0.25
CLRN1-206ENST00000485607 TDRD9Q8NDG6 1382 aaKnown RBP13.46□□□□□ -0.25
CLRN1-206ENST00000485607 L3MBTL3Q96JM7 780 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-206ENST00000485607 SOGA1O94964 1423 aa13.46□□□□□ -0.26
CLRN1-206ENST00000485607 ARHGEF11O15085 1522 aa13.45□□□□□ -0.26
CLRN1-206ENST00000485607 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
CLRN1-206ENST00000485607 CHD1O14646 1710 aa13.44□□□□□ -0.26
CLRN1-206ENST00000485607 SUPT5HO00267 1087 aaKnown RBP13.44□□□□□ -0.26
CLRN1-206ENST00000485607 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
CLRN1-206ENST00000485607 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
CLRN1-206ENST00000485607 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
CLRN1-206ENST00000485607 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
CLRN1-206ENST00000485607 SNAPC4Q5SXM2 1469 aa13.4□□□□□ -0.26
CLRN1-206ENST00000485607 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
CLRN1-206ENST00000485607 G3V3G9 751 aa13.36□□□□□ -0.27
CLRN1-206ENST00000485607 CABP2Q9NPB3 220 aa13.36□□□□□ -0.27
CLRN1-206ENST00000485607 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
CLRN1-206ENST00000485607 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
CLRN1-206ENST00000485607 ARAP1Q96P48 1450 aa13.34□□□□□ -0.27
CLRN1-206ENST00000485607 CYB5RLQ6IPT4 315 aa13.33□□□□□ -0.28
CLRN1-206ENST00000485607 MAGI1Q96QZ7 1491 aaPredicted RBP13.33□□□□□ -0.28
CLRN1-206ENST00000485607 CLASP1Q7Z460 1538 aa13.32□□□□□ -0.28
CLRN1-206ENST00000485607 DPY19L2Q6NUT2 758 aa13.31□□□□□ -0.28
CLRN1-206ENST00000485607 GAPVD1Q14C86 1478 aa13.3□□□□□ -0.28
CLRN1-206ENST00000485607 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
CLRN1-206ENST00000485607 SYNJ2O15056 1496 aa13.29□□□□□ -0.28
CLRN1-206ENST00000485607 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
CLRN1-206ENST00000485607 EMP3P54852 163 aa13.29□□□□□ -0.28
CLRN1-206ENST00000485607 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
CLRN1-206ENST00000485607 PBRM1Q86U86 1689 aa13.28□□□□□ -0.28
CLRN1-206ENST00000485607 SYNJ1O43426 1573 aa13.27□□□□□ -0.29
CLRN1-206ENST00000485607 BOLA1Q9Y3E2 137 aa13.24□□□□□ -0.29
CLRN1-206ENST00000485607 TOP2BQ02880 1626 aa13.24□□□□□ -0.29
CLRN1-206ENST00000485607 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
CLRN1-206ENST00000485607 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
CLRN1-206ENST00000485607 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
CLRN1-206ENST00000485607 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
CLRN1-206ENST00000485607 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
CLRN1-206ENST00000485607 ILDR1Q86SU0 546 aaPredicted RBP13.2□□□□□ -0.3
CLRN1-206ENST00000485607 ADAMTS12P58397 1594 aa13.2□□□□□ -0.3
CLRN1-206ENST00000485607 GRIN2AQ12879 1464 aa13.18□□□□□ -0.3
CLRN1-206ENST00000485607 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
CLRN1-206ENST00000485607 CEP170Q5SW79 1584 aa13.15□□□□□ -0.3
CLRN1-206ENST00000485607 ZNF710Q8N1W2 664 aa13.15□□□□□ -0.3
CLRN1-206ENST00000485607 EFCAB3Q8N7B9 438 aa13.15□□□□□ -0.3
CLRN1-206ENST00000485607 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
CLRN1-206ENST00000485607 NUP160Q12769 1436 aa13.14□□□□□ -0.31
CLRN1-206ENST00000485607 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
CLRN1-206ENST00000485607 ERICH3Q5RHP9 1530 aa13.12□□□□□ -0.31
CLRN1-206ENST00000485607 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
CLRN1-206ENST00000485607 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
CLRN1-206ENST00000485607 SHROOM2Q13796 1616 aa13.07□□□□□ -0.32
CLRN1-206ENST00000485607 DOK7Q18PE1 504 aa13.07□□□□□ -0.32
CLRN1-206ENST00000485607 HOXB3P14651 431 aaPredicted RBP13.06□□□□□ -0.32
CLRN1-206ENST00000485607 RIOK3O14730 519 aaKnown RBP13.03□□□□□ -0.32
CLRN1-206ENST00000485607 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
CLRN1-206ENST00000485607 KRTAP3-3Q9BYR6 98 aa13.03□□□□□ -0.32
CLRN1-206ENST00000485607 KRTAP3-2Q9BYR7 98 aa13.03□□□□□ -0.32
CLRN1-206ENST00000485607 ERBB3P21860 1342 aa13.03□□□□□ -0.32
CLRN1-206ENST00000485607 HOXB1P14653 301 aaPredicted RBP13.01□□□□□ -0.33
CLRN1-206ENST00000485607 RUSC2Q8N2Y8 1516 aa13.01□□□□□ -0.33
CLRN1-206ENST00000485607 PRG4Q92954 1404 aaPredicted RBP13□□□□□ -0.33
CLRN1-206ENST00000485607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.99□□□□□ -0.33
CLRN1-206ENST00000485607 SOX12O15370 315 aa12.99□□□□□ -0.33
CLRN1-206ENST00000485607 MICALL2Q8IY33 904 aa12.99□□□□□ -0.33
CLRN1-206ENST00000485607 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
CLRN1-206ENST00000485607 IGF1RP08069 1367 aa12.98□□□□□ -0.33
CLRN1-206ENST00000485607 VGFO15240 615 aaPredicted RBP12.97□□□□□ -0.33
CLRN1-206ENST00000485607 JPH4Q96JJ6 628 aa12.97□□□□□ -0.33
CLRN1-206ENST00000485607 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
CLRN1-206ENST00000485607 PHF8Q9UPP1 1060 aa12.95□□□□□ -0.34
CLRN1-206ENST00000485607 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
CLRN1-206ENST00000485607 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
CLRN1-206ENST00000485607 CUL7Q14999 1698 aa12.92□□□□□ -0.34
CLRN1-206ENST00000485607 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
CLRN1-206ENST00000485607 KIAA0586Q9BVV6 1533 aa12.91□□□□□ -0.34
CLRN1-206ENST00000485607 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
CLRN1-206ENST00000485607 TAOK2Q9UL54 1235 aa12.88□□□□□ -0.35
CLRN1-206ENST00000485607 CARMIL1Q5VZK9 1371 aa12.87□□□□□ -0.35
CLRN1-206ENST00000485607 ADCY10Q96PN6 1610 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms