RNA–Protein interactions for RNA: ENST00000482657.1

LCNL1-204, Transcript of lipocalin like 1, humanhuman

TSL 2

Gene LCNL1, Length 3,706 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCNL1-204ENST00000482657 PRKRIP1Q9H875 184 aaPredicted RBP20.73■□□□□ 0.91
LCNL1-204ENST00000482657 FANCIQ9NVI1 1328 aa20.71■□□□□ 0.91
LCNL1-204ENST00000482657 EFCAB5A4FU69 1503 aa20.71■□□□□ 0.91
LCNL1-204ENST00000482657 URB2Q14146 1524 aaKnown RBP20.7■□□□□ 0.9
LCNL1-204ENST00000482657 DCAF11Q8TEB1 546 aa20.69■□□□□ 0.9
LCNL1-204ENST00000482657 CDK13Q14004 1512 aaKnown RBP20.67■□□□□ 0.9
LCNL1-204ENST00000482657 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
LCNL1-204ENST00000482657 KIF7Q2M1P5 1343 aa20.62■□□□□ 0.89
LCNL1-204ENST00000482657 HNRNPMP52272 730 aaKnown RBP eCLIP20.62■□□□□ 0.89
LCNL1-204ENST00000482657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.62■□□□□ 0.89
LCNL1-204ENST00000482657 NUP155O75694 1391 aa20.6■□□□□ 0.89
LCNL1-204ENST00000482657 CCDC7Q96M83 1385 aa20.6■□□□□ 0.89
LCNL1-204ENST00000482657 RTN4Q9NQC3 1192 aaKnown RBP20.6■□□□□ 0.89
LCNL1-204ENST00000482657 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.89
LCNL1-204ENST00000482657 ERCC6Q03468 1493 aa20.58■□□□□ 0.89
LCNL1-204ENST00000482657 ERICH6BQ5W0A0 696 aa20.57■□□□□ 0.88
LCNL1-204ENST00000482657 JPH4Q96JJ6 628 aa20.57■□□□□ 0.88
LCNL1-204ENST00000482657 PTPN23Q9H3S7 1636 aa20.57■□□□□ 0.88
LCNL1-204ENST00000482657 PAK3O75914 559 aaPredicted RBP20.56■□□□□ 0.88
LCNL1-204ENST00000482657 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
LCNL1-204ENST00000482657 CC2D1BQ5T0F9 858 aaKnown RBP20.55■□□□□ 0.88
LCNL1-204ENST00000482657 SNAPC4Q5SXM2 1469 aa20.55■□□□□ 0.88
LCNL1-204ENST00000482657 ST20-MTHFSA0A0A6YYL1 179 aa20.54■□□□□ 0.88
LCNL1-204ENST00000482657 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
LCNL1-204ENST00000482657 SUPT6HQ7KZ85 1726 aaKnown RBP20.53■□□□□ 0.88
LCNL1-204ENST00000482657 EPRSP07814 1512 aaKnown RBP20.53■□□□□ 0.88
LCNL1-204ENST00000482657 ZBED9Q6R2W3 1325 aa20.53■□□□□ 0.88
LCNL1-204ENST00000482657 CFAP43Q8NDM7 1665 aa20.53■□□□□ 0.88
LCNL1-204ENST00000482657 CUL7Q14999 1698 aa20.53■□□□□ 0.88
LCNL1-204ENST00000482657 CNTLNQ9NXG0 1405 aa20.52■□□□□ 0.88
LCNL1-204ENST00000482657 PRG4Q92954 1404 aaPredicted RBP20.51■□□□□ 0.87
LCNL1-204ENST00000482657 USP47Q96K76 1375 aa20.5■□□□□ 0.87
LCNL1-204ENST00000482657 GRIN2BQ13224 1484 aa20.49■□□□□ 0.87
LCNL1-204ENST00000482657 SENP3Q9H4L4 574 aaPredicted RBP20.49■□□□□ 0.87
LCNL1-204ENST00000482657 ANKRD30AQ9BXX3 1397 aa20.47■□□□□ 0.87
LCNL1-204ENST00000482657 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
LCNL1-204ENST00000482657 AKNAQ7Z591 1439 aa20.45■□□□□ 0.86
LCNL1-204ENST00000482657 IPO9Q96P70 1041 aaKnown RBP20.44■□□□□ 0.86
LCNL1-204ENST00000482657 ZNF608Q9ULD9 1512 aaPredicted RBP20.43■□□□□ 0.86
LCNL1-204ENST00000482657 NEFMP07197 916 aa20.43■□□□□ 0.86
LCNL1-204ENST00000482657 DAPK1P53355 1430 aa20.43■□□□□ 0.86
LCNL1-204ENST00000482657 CTTNBP2Q8WZ74 1663 aa20.43■□□□□ 0.86
LCNL1-204ENST00000482657 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
LCNL1-204ENST00000482657 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
LCNL1-204ENST00000482657 LAMC3Q9Y6N6 1575 aa20.41■□□□□ 0.86
LCNL1-204ENST00000482657 CHGAP10645 457 aaKnown RBP20.41■□□□□ 0.86
LCNL1-204ENST00000482657 ROCK2O75116 1388 aaKnown RBP20.4■□□□□ 0.86
LCNL1-204ENST00000482657 ABCC5O15440 1437 aa20.39■□□□□ 0.86
LCNL1-204ENST00000482657 IQGAP2Q13576 1575 aa20.39■□□□□ 0.85
LCNL1-204ENST00000482657 MIA2Q96PC5 1412 aa20.39■□□□□ 0.85
LCNL1-204ENST00000482657 MAGI3Q5TCQ9 1506 aa20.39■□□□□ 0.85
LCNL1-204ENST00000482657 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
LCNL1-204ENST00000482657 HECW1Q76N89 1606 aa20.38■□□□□ 0.85
LCNL1-204ENST00000482657 UGGT2Q9NYU1 1516 aa20.37■□□□□ 0.85
LCNL1-204ENST00000482657 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
LCNL1-204ENST00000482657 EXOC6Q8TAG9 804 aa20.35■□□□□ 0.85
LCNL1-204ENST00000482657 ANKRD50Q9ULJ7 1429 aa20.34■□□□□ 0.85
LCNL1-204ENST00000482657 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
LCNL1-204ENST00000482657 PLIN1O60240 522 aa20.31■□□□□ 0.84
LCNL1-204ENST00000482657 WDR43Q15061 677 aaKnown RBP eCLIP20.31■□□□□ 0.84
LCNL1-204ENST00000482657 RCAN3Q9UKA8 241 aa20.3■□□□□ 0.84
LCNL1-204ENST00000482657 NCOA1Q15788 1441 aa20.3■□□□□ 0.84
LCNL1-204ENST00000482657 KDM6BO15054 1643 aa20.3■□□□□ 0.84
LCNL1-204ENST00000482657 EIF5BO60841 1220 aaKnown RBP20.3■□□□□ 0.84
LCNL1-204ENST00000482657 MRC2Q9UBG0 1479 aa20.29■□□□□ 0.84
LCNL1-204ENST00000482657 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
LCNL1-204ENST00000482657 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.84
LCNL1-204ENST00000482657 RPRD2Q5VT52 1461 aaKnown RBP20.26■□□□□ 0.83
LCNL1-204ENST00000482657 KNSTRNQ9Y448 316 aa20.26■□□□□ 0.83
LCNL1-204ENST00000482657 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
LCNL1-204ENST00000482657 PANK3Q9H999 370 aa20.24■□□□□ 0.83
LCNL1-204ENST00000482657 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
LCNL1-204ENST00000482657 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
LCNL1-204ENST00000482657 KTN1Q86UP2 1357 aaKnown RBP20.24■□□□□ 0.83
LCNL1-204ENST00000482657 CDCA7LQ96GN5 454 aa20.24■□□□□ 0.83
LCNL1-204ENST00000482657 PDE4AP27815 886 aa20.23■□□□□ 0.83
LCNL1-204ENST00000482657 CANXP27824 592 aaKnown RBP20.23■□□□□ 0.83
LCNL1-204ENST00000482657 TNNT2P45379 298 aaPredicted RBP20.23■□□□□ 0.83
LCNL1-204ENST00000482657 KIF21AQ7Z4S6 1674 aa20.23■□□□□ 0.83
LCNL1-204ENST00000482657 SLC4A3P48751 1232 aa20.23■□□□□ 0.83
LCNL1-204ENST00000482657 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.23■□□□□ 0.83
LCNL1-204ENST00000482657 SAMD9Q5K651 1589 aa20.22■□□□□ 0.83
LCNL1-204ENST00000482657 ROCK1Q13464 1354 aa20.22■□□□□ 0.83
LCNL1-204ENST00000482657 MYBBP1AQ9BQG0 1328 aaKnown RBP20.22■□□□□ 0.83
LCNL1-204ENST00000482657 RALBP1Q15311 655 aa20.22■□□□□ 0.83
LCNL1-204ENST00000482657 RRP1P56182 461 aaKnown RBP20.22■□□□□ 0.83
LCNL1-204ENST00000482657 TMF1P82094 1093 aa20.22■□□□□ 0.83
LCNL1-204ENST00000482657 NLRP13Q86W25 1043 aa20.22■□□□□ 0.83
LCNL1-204ENST00000482657 ABCA5Q8WWZ7 1642 aa20.21■□□□□ 0.83
LCNL1-204ENST00000482657 RGS3P49796 1198 aa20.21■□□□□ 0.83
LCNL1-204ENST00000482657 NEUROD2Q15784 382 aa20.21■□□□□ 0.83
LCNL1-204ENST00000482657 NUP153P49790 1475 aaKnown RBP20.21■□□□□ 0.83
LCNL1-204ENST00000482657 PTPRGP23470 1445 aa20.21■□□□□ 0.83
LCNL1-204ENST00000482657 CAMSAP2Q08AD1 1489 aa20.21■□□□□ 0.83
LCNL1-204ENST00000482657 SKAP1Q86WV1 359 aa20.2■□□□□ 0.83
LCNL1-204ENST00000482657 IL27Q8NEV9 243 aa20.2■□□□□ 0.83
LCNL1-204ENST00000482657 CCDC144AA2RUR9 1427 aa20.19■□□□□ 0.82
LCNL1-204ENST00000482657 TCERG1O14776 1098 aaKnown RBP20.19■□□□□ 0.82
LCNL1-204ENST00000482657 ARXQ96QS3 562 aa20.19■□□□□ 0.82
LCNL1-204ENST00000482657 IFT140Q96RY7 1462 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms