RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 WRNQ14191 1432 aaPredicted RBP eCLIP10.59□□□□□ -0.71
NCK1-208ENST00000482071 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
NCK1-208ENST00000482071 TOP2BQ02880 1626 aa10.58□□□□□ -0.72
NCK1-208ENST00000482071 SYNJ1O43426 1573 aa10.58□□□□□ -0.72
NCK1-208ENST00000482071 C3orf67Q6ZVT6 689 aa10.56□□□□□ -0.72
NCK1-208ENST00000482071 NESP48681 1621 aa10.55□□□□□ -0.72
NCK1-208ENST00000482071 CUX1P39880 1505 aa10.54□□□□□ -0.72
NCK1-208ENST00000482071 SNPHO15079 494 aa10.54□□□□□ -0.72
NCK1-208ENST00000482071 DPY19L2Q6NUT2 758 aa10.54□□□□□ -0.72
NCK1-208ENST00000482071 TMEM121BQ9BXQ6 578 aaPredicted RBP10.54□□□□□ -0.72
NCK1-208ENST00000482071 FANCD2Q9BXW9 1451 aa10.54□□□□□ -0.72
NCK1-208ENST00000482071 RNF25Q96BH1 459 aaPredicted RBP10.53□□□□□ -0.72
NCK1-208ENST00000482071 CDAN1Q8IWY9 1227 aa10.52□□□□□ -0.73
NCK1-208ENST00000482071 PDS5BQ9NTI5 1447 aa10.5□□□□□ -0.73
NCK1-208ENST00000482071 BOLA1Q9Y3E2 137 aa10.49□□□□□ -0.73
NCK1-208ENST00000482071 KIF21AQ7Z4S6 1674 aa10.48□□□□□ -0.73
NCK1-208ENST00000482071 RIOK3O14730 519 aaKnown RBP10.48□□□□□ -0.73
NCK1-208ENST00000482071 EFCAB3Q8N7B9 438 aa10.48□□□□□ -0.73
NCK1-208ENST00000482071 DNMBPQ6XZF7 1577 aa10.48□□□□□ -0.73
NCK1-208ENST00000482071 EEA1Q15075 1411 aa10.47□□□□□ -0.73
NCK1-208ENST00000482071 CEP164Q9UPV0 1460 aa10.47□□□□□ -0.73
NCK1-208ENST00000482071 TOPBP1Q92547 1522 aa10.44□□□□□ -0.74
NCK1-208ENST00000482071 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
NCK1-208ENST00000482071 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
NCK1-208ENST00000482071 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
NCK1-208ENST00000482071 MARVELD3Q96A59 401 aa10.43□□□□□ -0.74
NCK1-208ENST00000482071 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
NCK1-208ENST00000482071 SOGA1O94964 1423 aa10.42□□□□□ -0.74
NCK1-208ENST00000482071 G3V3G9 751 aa10.42□□□□□ -0.74
NCK1-208ENST00000482071 RUSC2Q8N2Y8 1516 aa10.41□□□□□ -0.74
NCK1-208ENST00000482071 FGD5Q6ZNL6 1462 aa10.4□□□□□ -0.74
NCK1-208ENST00000482071 SOX12O15370 315 aa10.39□□□□□ -0.75
NCK1-208ENST00000482071 MS4A4AQ96JQ5 239 aa10.39□□□□□ -0.75
NCK1-208ENST00000482071 POLA1P09884 1462 aaPredicted RBP10.38□□□□□ -0.75
NCK1-208ENST00000482071 WDR97A6NE52 1622 aa10.38□□□□□ -0.75
NCK1-208ENST00000482071 HOXB3P14651 431 aaPredicted RBP10.38□□□□□ -0.75
NCK1-208ENST00000482071 WDR62O43379 1518 aa10.38□□□□□ -0.75
NCK1-208ENST00000482071 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
NCK1-208ENST00000482071 ABCA10Q8WWZ4 1543 aa10.37□□□□□ -0.75
NCK1-208ENST00000482071 MICALL2Q8IY33 904 aa10.36□□□□□ -0.75
NCK1-208ENST00000482071 THOC2Q8NI27 1593 aaKnown RBP10.35□□□□□ -0.75
NCK1-208ENST00000482071 EMP3P54852 163 aa10.35□□□□□ -0.75
NCK1-208ENST00000482071 KIF21BO75037 1637 aa10.35□□□□□ -0.75
NCK1-208ENST00000482071 TARBP1Q13395 1621 aaKnown RBP10.35□□□□□ -0.75
NCK1-208ENST00000482071 PHF8Q9UPP1 1060 aa10.34□□□□□ -0.75
NCK1-208ENST00000482071 TMEM92Q6UXU6 159 aa10.33□□□□□ -0.76
NCK1-208ENST00000482071 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
NCK1-208ENST00000482071 CUX2O14529 1486 aa10.32□□□□□ -0.76
NCK1-208ENST00000482071 PRXQ9BXM0 1461 aa10.32□□□□□ -0.76
NCK1-208ENST00000482071 LOC105371045A0A1W2PR82 267 aa10.32□□□□□ -0.76
NCK1-208ENST00000482071 POTEB3A0JP26 581 aa10.32□□□□□ -0.76
NCK1-208ENST00000482071 POTEBQ6S5H4 581 aa10.32□□□□□ -0.76
NCK1-208ENST00000482071 HS3ST6Q96QI5 342 aa10.31□□□□□ -0.76
NCK1-208ENST00000482071 ABCA5Q8WWZ7 1642 aa10.3□□□□□ -0.76
NCK1-208ENST00000482071 BCL11BQ9C0K0 894 aaPredicted RBP10.3□□□□□ -0.76
NCK1-208ENST00000482071 TAOK2Q9UL54 1235 aa10.3□□□□□ -0.76
NCK1-208ENST00000482071 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
NCK1-208ENST00000482071 IGF1RP08069 1367 aa10.29□□□□□ -0.76
NCK1-208ENST00000482071 ERICH3Q5RHP9 1530 aa10.29□□□□□ -0.76
NCK1-208ENST00000482071 FBXO22Q8NEZ5 403 aa10.29□□□□□ -0.76
NCK1-208ENST00000482071 FAM205CA6NFA0 338 aa10.28□□□□□ -0.76
NCK1-208ENST00000482071 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
NCK1-208ENST00000482071 DOK7Q18PE1 504 aa10.28□□□□□ -0.76
NCK1-208ENST00000482071 SPNS2Q8IVW8 549 aa10.28□□□□□ -0.76
NCK1-208ENST00000482071 FAM9AQ8IZU1 332 aaPredicted RBP10.28□□□□□ -0.76
NCK1-208ENST00000482071 PKD2Q13563 968 aa10.27□□□□□ -0.77
NCK1-208ENST00000482071 GOLGA3Q08378 1498 aa10.26□□□□□ -0.77
NCK1-208ENST00000482071 ECM2O94769 699 aaPredicted RBP10.26□□□□□ -0.77
NCK1-208ENST00000482071 NLRP6P59044 892 aa10.26□□□□□ -0.77
NCK1-208ENST00000482071 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
NCK1-208ENST00000482071 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
NCK1-208ENST00000482071 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
NCK1-208ENST00000482071 ERCC6Q03468 1493 aa10.25□□□□□ -0.77
NCK1-208ENST00000482071 IFT140Q96RY7 1462 aa10.25□□□□□ -0.77
NCK1-208ENST00000482071 ZNF710Q8N1W2 664 aa10.25□□□□□ -0.77
NCK1-208ENST00000482071 STK24Q9Y6E0 443 aa10.25□□□□□ -0.77
NCK1-208ENST00000482071 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
NCK1-208ENST00000482071 MFRPQ9BY79 579 aa10.24□□□□□ -0.77
NCK1-208ENST00000482071 CUL7Q14999 1698 aa10.23□□□□□ -0.77
NCK1-208ENST00000482071 STK25O00506 426 aa10.23□□□□□ -0.77
NCK1-208ENST00000482071 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
NCK1-208ENST00000482071 RGL2O15211 777 aa10.22□□□□□ -0.77
NCK1-208ENST00000482071 GAPVD1Q14C86 1478 aa10.22□□□□□ -0.77
NCK1-208ENST00000482071 RIMBP2O15034 1052 aa10.21□□□□□ -0.77
NCK1-208ENST00000482071 ZSWIM6Q9HCJ5 1215 aa10.21□□□□□ -0.77
NCK1-208ENST00000482071 PBRM1Q86U86 1689 aa10.2□□□□□ -0.78
NCK1-208ENST00000482071 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
NCK1-208ENST00000482071 TDRD9Q8NDG6 1382 aaKnown RBP10.18□□□□□ -0.78
NCK1-208ENST00000482071 GPR153Q6NV75 609 aa10.17□□□□□ -0.78
NCK1-208ENST00000482071 ZNF608Q9ULD9 1512 aaPredicted RBP10.16□□□□□ -0.78
NCK1-208ENST00000482071 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
NCK1-208ENST00000482071 ERBB3P21860 1342 aa10.15□□□□□ -0.78
NCK1-208ENST00000482071 EIF4G3O43432 1585 aaKnown RBP10.15□□□□□ -0.78
NCK1-208ENST00000482071 KIF3CO14782 793 aa10.14□□□□□ -0.79
NCK1-208ENST00000482071 AQRO60306 1485 aaKnown RBP eCLIP10.14□□□□□ -0.79
NCK1-208ENST00000482071 CEP162Q5TB80 1403 aa10.13□□□□□ -0.79
NCK1-208ENST00000482071 ADAMTS12P58397 1594 aa10.13□□□□□ -0.79
NCK1-208ENST00000482071 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
NCK1-208ENST00000482071 FHAD1B1AJZ9 1412 aa10.12□□□□□ -0.79
NCK1-208ENST00000482071 CTTNBP2Q8WZ74 1663 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms