RNA–Protein interactions for RNA: ENST00000482071.1

NCK1-208, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-208ENST00000482071 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
NCK1-208ENST00000482071 CHIC1Q5VXU3 224 aa22.04■■□□□ 1.12
NCK1-208ENST00000482071 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
NCK1-208ENST00000482071 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
NCK1-208ENST00000482071 FOXD1Q16676 465 aa18.42■□□□□ 0.54
NCK1-208ENST00000482071 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
NCK1-208ENST00000482071 PPP6R1Q9UPN7 881 aa17.25■□□□□ 0.35
NCK1-208ENST00000482071 MSH5O43196 834 aa17.22■□□□□ 0.35
NCK1-208ENST00000482071 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
NCK1-208ENST00000482071 ADRA2BP18089 450 aa17.16■□□□□ 0.34
NCK1-208ENST00000482071 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
NCK1-208ENST00000482071 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
NCK1-208ENST00000482071 DMRT2Q9Y5R5 561 aa15.7■□□□□ 0.1
NCK1-208ENST00000482071 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
NCK1-208ENST00000482071 PPP4R3CPQ6ZMV5 832 aa15.41■□□□□ 0.06
NCK1-208ENST00000482071 CNKSR2Q8WXI2 1034 aa15.14■□□□□ 0.01
NCK1-208ENST00000482071 HOXD11P31277 338 aaPredicted RBP15.13■□□□□ 0.01
NCK1-208ENST00000482071 RNF216Q9NWF9 866 aaPredicted RBP15□□□□□ -0.01
NCK1-208ENST00000482071 DCAF8L1A6NGE4 600 aa14.94□□□□□ -0.02
NCK1-208ENST00000482071 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
NCK1-208ENST00000482071 CACNB1Q02641 598 aaPredicted RBP14.73□□□□□ -0.05
NCK1-208ENST00000482071 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
NCK1-208ENST00000482071 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
NCK1-208ENST00000482071 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
NCK1-208ENST00000482071 NISCHQ9Y2I1 1504 aa14.64□□□□□ -0.07
NCK1-208ENST00000482071 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
NCK1-208ENST00000482071 KCNA4P22459 653 aa14.36□□□□□ -0.11
NCK1-208ENST00000482071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
NCK1-208ENST00000482071 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
NCK1-208ENST00000482071 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
NCK1-208ENST00000482071 SPINK5Q9NQ38 1064 aaPredicted RBP13.87□□□□□ -0.19
NCK1-208ENST00000482071 CAPN15O75808 1086 aa13.79□□□□□ -0.2
NCK1-208ENST00000482071 DSG3P32926 999 aa13.78□□□□□ -0.2
NCK1-208ENST00000482071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.67□□□□□ -0.22
NCK1-208ENST00000482071 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
NCK1-208ENST00000482071 APLP2Q06481 763 aa13.66□□□□□ -0.22
NCK1-208ENST00000482071 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
NCK1-208ENST00000482071 ZNF219Q9P2Y4 722 aaPredicted RBP13.6□□□□□ -0.23
NCK1-208ENST00000482071 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
NCK1-208ENST00000482071 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
NCK1-208ENST00000482071 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
NCK1-208ENST00000482071 ABCB7O75027 752 aa13.49□□□□□ -0.25
NCK1-208ENST00000482071 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
NCK1-208ENST00000482071 POLA2Q14181 598 aa13.25□□□□□ -0.29
NCK1-208ENST00000482071 ZBTB22O15209 634 aa13.23□□□□□ -0.29
NCK1-208ENST00000482071 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
NCK1-208ENST00000482071 POTEHQ6S545 545 aa13.15□□□□□ -0.3
NCK1-208ENST00000482071 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
NCK1-208ENST00000482071 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
NCK1-208ENST00000482071 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
NCK1-208ENST00000482071 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
NCK1-208ENST00000482071 AKT1S1Q96B36 256 aa12.85□□□□□ -0.35
NCK1-208ENST00000482071 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
NCK1-208ENST00000482071 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
NCK1-208ENST00000482071 REM2Q8IYK8 340 aaPredicted RBP12.72□□□□□ -0.37
NCK1-208ENST00000482071 FBLN2P98095 1184 aa12.66□□□□□ -0.38
NCK1-208ENST00000482071 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
NCK1-208ENST00000482071 CSRNP3Q8WYN3 585 aa12.62□□□□□ -0.39
NCK1-208ENST00000482071 SPDYE2BA6NHP3 402 aa12.61□□□□□ -0.39
NCK1-208ENST00000482071 SPDYE6P0CI01 402 aa12.61□□□□□ -0.39
NCK1-208ENST00000482071 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
NCK1-208ENST00000482071 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
NCK1-208ENST00000482071 PIP4P2Q8N4L2 257 aa12.54□□□□□ -0.4
NCK1-208ENST00000482071 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
NCK1-208ENST00000482071 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
NCK1-208ENST00000482071 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
NCK1-208ENST00000482071 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
NCK1-208ENST00000482071 SPDYE1Q8NFV5 336 aaPredicted RBP12.37□□□□□ -0.43
NCK1-208ENST00000482071 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
NCK1-208ENST00000482071 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
NCK1-208ENST00000482071 ZCCHC6Q5VYS8 1495 aaKnown RBP12.28□□□□□ -0.44
NCK1-208ENST00000482071 HAX1O00165 279 aa12.26□□□□□ -0.45
NCK1-208ENST00000482071 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
NCK1-208ENST00000482071 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
NCK1-208ENST00000482071 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
NCK1-208ENST00000482071 EVX2Q03828 476 aa12.17□□□□□ -0.46
NCK1-208ENST00000482071 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
NCK1-208ENST00000482071 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
NCK1-208ENST00000482071 CHADLQ6NUI6 762 aa12.09□□□□□ -0.47
NCK1-208ENST00000482071 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
NCK1-208ENST00000482071 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
NCK1-208ENST00000482071 ABCC9O60706 1549 aa12□□□□□ -0.49
NCK1-208ENST00000482071 NACADO15069 1562 aa11.95□□□□□ -0.5
NCK1-208ENST00000482071 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
NCK1-208ENST00000482071 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
NCK1-208ENST00000482071 GABBR2O75899 941 aa11.87□□□□□ -0.51
NCK1-208ENST00000482071 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
NCK1-208ENST00000482071 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
NCK1-208ENST00000482071 RB1CC1Q8TDY2 1594 aa11.81□□□□□ -0.52
NCK1-208ENST00000482071 DCAF8L2P0C7V8 631 aa11.81□□□□□ -0.52
NCK1-208ENST00000482071 PROM2Q8N271 834 aa11.8□□□□□ -0.52
NCK1-208ENST00000482071 CLCN6P51797 869 aa11.72□□□□□ -0.53
NCK1-208ENST00000482071 ZNF579Q8NAF0 562 aaKnown RBP11.71□□□□□ -0.53
NCK1-208ENST00000482071 MNX1P50219 401 aaPredicted RBP11.7□□□□□ -0.54
NCK1-208ENST00000482071 ZRANB1Q9UGI0 708 aa11.67□□□□□ -0.54
NCK1-208ENST00000482071 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
NCK1-208ENST00000482071 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
NCK1-208ENST00000482071 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
NCK1-208ENST00000482071 SCRIBQ14160 1630 aa11.63□□□□□ -0.55
NCK1-208ENST00000482071 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms