RNA–Protein interactions for RNA: ENST00000477282.5

GCOM1-207, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-207ENST00000477282 PLCB2Q00722 1185 aa10.38□□□□□ -0.75
GCOM1-207ENST00000477282 CABP2Q9NPB3 220 aa10.36□□□□□ -0.75
GCOM1-207ENST00000477282 URB2Q14146 1524 aaKnown RBP10.35□□□□□ -0.75
GCOM1-207ENST00000477282 HOMEZQ8IX15 550 aa10.34□□□□□ -0.75
GCOM1-207ENST00000477282 TIMELESSQ9UNS1 1208 aa10.34□□□□□ -0.75
GCOM1-207ENST00000477282 STK25O00506 426 aa10.33□□□□□ -0.76
GCOM1-207ENST00000477282 PLCG2P16885 1265 aa10.33□□□□□ -0.76
GCOM1-207ENST00000477282 RANGAP1P46060 587 aaPredicted RBP10.33□□□□□ -0.76
GCOM1-207ENST00000477282 LHX8Q68G74 356 aa10.33□□□□□ -0.76
GCOM1-207ENST00000477282 SUPT5HO00267 1087 aaKnown RBP10.33□□□□□ -0.76
GCOM1-207ENST00000477282 BCL11BQ9C0K0 894 aaPredicted RBP10.33□□□□□ -0.76
GCOM1-207ENST00000477282 OCEL1Q9H607 264 aa10.32□□□□□ -0.76
GCOM1-207ENST00000477282 STK24Q9Y6E0 443 aa10.32□□□□□ -0.76
GCOM1-207ENST00000477282 IRX5P78411 483 aaPredicted RBP10.31□□□□□ -0.76
GCOM1-207ENST00000477282 PRDM2Q13029 1718 aa10.3□□□□□ -0.76
GCOM1-207ENST00000477282 TPRNQ4KMQ1 711 aa10.29□□□□□ -0.76
GCOM1-207ENST00000477282 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
GCOM1-207ENST00000477282 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
GCOM1-207ENST00000477282 TULP1O00294 542 aaPredicted RBP10.28□□□□□ -0.76
GCOM1-207ENST00000477282 EFCAB3Q8N7B9 438 aa10.28□□□□□ -0.76
GCOM1-207ENST00000477282 POTEFA5A3E0 1075 aa10.27□□□□□ -0.77
GCOM1-207ENST00000477282 SOX12O15370 315 aa10.27□□□□□ -0.77
GCOM1-207ENST00000477282 TTBK1Q5TCY1 1321 aaPredicted RBP10.27□□□□□ -0.77
GCOM1-207ENST00000477282 TOPBP1Q92547 1522 aa10.26□□□□□ -0.77
GCOM1-207ENST00000477282 HAP1P54257 671 aaPredicted RBP10.26□□□□□ -0.77
GCOM1-207ENST00000477282 HS6ST3Q8IZP7 471 aa10.26□□□□□ -0.77
GCOM1-207ENST00000477282 MAMSTRQ6ZN01 415 aa10.25□□□□□ -0.77
GCOM1-207ENST00000477282 CHGAP10645 457 aaKnown RBP10.24□□□□□ -0.77
GCOM1-207ENST00000477282 ABCC8Q09428 1581 aa10.23□□□□□ -0.77
GCOM1-207ENST00000477282 ILDR1Q86SU0 546 aaPredicted RBP10.23□□□□□ -0.77
GCOM1-207ENST00000477282 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
GCOM1-207ENST00000477282 IFT140Q96RY7 1462 aa10.23□□□□□ -0.77
GCOM1-207ENST00000477282 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
GCOM1-207ENST00000477282 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
GCOM1-207ENST00000477282 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.77
GCOM1-207ENST00000477282 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.78
GCOM1-207ENST00000477282 SCUBE2Q9NQ36 999 aa10.21□□□□□ -0.78
GCOM1-207ENST00000477282 NLRP6P59044 892 aa10.2□□□□□ -0.78
GCOM1-207ENST00000477282 G3V3G9 751 aa10.18□□□□□ -0.78
GCOM1-207ENST00000477282 POLA1P09884 1462 aaPredicted RBP10.18□□□□□ -0.78
GCOM1-207ENST00000477282 PHF8Q9UPP1 1060 aa10.17□□□□□ -0.78
GCOM1-207ENST00000477282 AQRO60306 1485 aaKnown RBP eCLIP10.16□□□□□ -0.78
GCOM1-207ENST00000477282 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
GCOM1-207ENST00000477282 RAD54L2Q9Y4B4 1467 aa10.15□□□□□ -0.78
GCOM1-207ENST00000477282 SOGA1O94964 1423 aa10.15□□□□□ -0.78
GCOM1-207ENST00000477282 MYT1Q01538 1121 aa10.15□□□□□ -0.78
GCOM1-207ENST00000477282 GTF3C3Q9Y5Q9 886 aa10.15□□□□□ -0.78
GCOM1-207ENST00000477282 TARBP1Q13395 1621 aaKnown RBP10.14□□□□□ -0.79
GCOM1-207ENST00000477282 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
GCOM1-207ENST00000477282 OTUD5Q96G74 571 aa10.13□□□□□ -0.79
GCOM1-207ENST00000477282 MFRPQ9BY79 579 aa10.13□□□□□ -0.79
GCOM1-207ENST00000477282 TDRD9Q8NDG6 1382 aaKnown RBP10.13□□□□□ -0.79
GCOM1-207ENST00000477282 EIF4G3O43432 1585 aaKnown RBP10.13□□□□□ -0.79
GCOM1-207ENST00000477282 CUX1P39880 1505 aa10.13□□□□□ -0.79
GCOM1-207ENST00000477282 FGD5Q6ZNL6 1462 aa10.13□□□□□ -0.79
GCOM1-207ENST00000477282 RYDENQ9NUL5 291 aaKnown RBP10.12□□□□□ -0.79
GCOM1-207ENST00000477282 BOLA1Q9Y3E2 137 aa10.12□□□□□ -0.79
GCOM1-207ENST00000477282 DPY19L2Q6NUT2 758 aa10.12□□□□□ -0.79
GCOM1-207ENST00000477282 C3orf67Q6ZVT6 689 aa10.12□□□□□ -0.79
GCOM1-207ENST00000477282 FBXO22Q8NEZ5 403 aa10.12□□□□□ -0.79
GCOM1-207ENST00000477282 MS4A4AQ96JQ5 239 aa10.1□□□□□ -0.79
GCOM1-207ENST00000477282 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.1□□□□□ -0.79
GCOM1-207ENST00000477282 TMEM121BQ9BXQ6 578 aaPredicted RBP10.05□□□□□ -0.8
GCOM1-207ENST00000477282 NKX1-1Q15270 411 aaPredicted RBP10.04□□□□□ -0.8
GCOM1-207ENST00000477282 MICALL2Q8IY33 904 aa10.04□□□□□ -0.8
GCOM1-207ENST00000477282 SLAIN1Q8ND83 568 aa10.04□□□□□ -0.8
GCOM1-207ENST00000477282 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
GCOM1-207ENST00000477282 SNAPC4Q5SXM2 1469 aa10.04□□□□□ -0.8
GCOM1-207ENST00000477282 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
GCOM1-207ENST00000477282 WRNQ14191 1432 aaPredicted RBP eCLIP10.02□□□□□ -0.8
GCOM1-207ENST00000477282 GRIN2BQ13224 1484 aa10.02□□□□□ -0.8
GCOM1-207ENST00000477282 CHD1O14646 1710 aa10.02□□□□□ -0.8
GCOM1-207ENST00000477282 WDR97A6NE52 1622 aa10.02□□□□□ -0.81
GCOM1-207ENST00000477282 GAPVD1Q14C86 1478 aa10.01□□□□□ -0.81
GCOM1-207ENST00000477282 RIMBP3CA6NJZ7 1639 aa10□□□□□ -0.81
GCOM1-207ENST00000477282 RIMBP3BA6NNM3 1639 aa10□□□□□ -0.81
GCOM1-207ENST00000477282 RIMBP3Q9UFD9 1639 aa10□□□□□ -0.81
GCOM1-207ENST00000477282 ARHGEF11O15085 1522 aa10□□□□□ -0.81
GCOM1-207ENST00000477282 ABCA10Q8WWZ4 1543 aa10□□□□□ -0.81
GCOM1-207ENST00000477282 MAGI1Q96QZ7 1491 aaPredicted RBP9.99□□□□□ -0.81
GCOM1-207ENST00000477282 CYB5RLQ6IPT4 315 aa9.99□□□□□ -0.81
GCOM1-207ENST00000477282 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
GCOM1-207ENST00000477282 TOP2BQ02880 1626 aa9.98□□□□□ -0.81
GCOM1-207ENST00000477282 SYNJ1O43426 1573 aa9.98□□□□□ -0.81
GCOM1-207ENST00000477282 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
GCOM1-207ENST00000477282 BIVM-ERCC5R4GMW8 1640 aa9.96□□□□□ -0.81
GCOM1-207ENST00000477282 ABCA5Q8WWZ7 1642 aa9.96□□□□□ -0.82
GCOM1-207ENST00000477282 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
GCOM1-207ENST00000477282 PPP1R37O75864 691 aa9.96□□□□□ -0.82
GCOM1-207ENST00000477282 PBRM1Q86U86 1689 aa9.95□□□□□ -0.82
GCOM1-207ENST00000477282 SNPHO15079 494 aa9.95□□□□□ -0.82
GCOM1-207ENST00000477282 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
GCOM1-207ENST00000477282 CLASP1Q7Z460 1538 aa9.91□□□□□ -0.82
GCOM1-207ENST00000477282 ARAP1Q96P48 1450 aa9.91□□□□□ -0.82
GCOM1-207ENST00000477282 SPRYD3Q8NCJ5 442 aa9.91□□□□□ -0.82
GCOM1-207ENST00000477282 GRIN2AQ12879 1464 aa9.89□□□□□ -0.83
GCOM1-207ENST00000477282 TMEM132AQ24JP5 1023 aa9.88□□□□□ -0.83
GCOM1-207ENST00000477282 TMC2Q8TDI7 906 aa9.88□□□□□ -0.83
GCOM1-207ENST00000477282 FHAD1B1AJZ9 1412 aa9.88□□□□□ -0.83
GCOM1-207ENST00000477282 ERICH3Q5RHP9 1530 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms