RNA–Protein interactions for RNA: ENST00000476589.1

NLGN3-204, Transcript of neuroligin 3, humanhuman

TSL 1 (best)

Gene NLGN3, Length 3,153 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3-204ENST00000476589 TMC1Q8TDI8 760 aa18.73■□□□□ 0.59
NLGN3-204ENST00000476589 NEFMP07197 916 aa18.73■□□□□ 0.59
NLGN3-204ENST00000476589 SUPT6HQ7KZ85 1726 aaKnown RBP18.72■□□□□ 0.59
NLGN3-204ENST00000476589 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
NLGN3-204ENST00000476589 KDM6BO15054 1643 aa18.71■□□□□ 0.59
NLGN3-204ENST00000476589 PRDM2Q13029 1718 aa18.71■□□□□ 0.59
NLGN3-204ENST00000476589 EHBP1L1Q8N3D4 1523 aa18.69■□□□□ 0.58
NLGN3-204ENST00000476589 HECW1Q76N89 1606 aa18.69■□□□□ 0.58
NLGN3-204ENST00000476589 RNF123Q5XPI4 1314 aa18.69■□□□□ 0.58
NLGN3-204ENST00000476589 TDRD9Q8NDG6 1382 aaKnown RBP18.69■□□□□ 0.58
NLGN3-204ENST00000476589 CTTNBP2Q8WZ74 1663 aa18.67■□□□□ 0.58
NLGN3-204ENST00000476589 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
NLGN3-204ENST00000476589 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
NLGN3-204ENST00000476589 GRIN2BQ13224 1484 aa18.67■□□□□ 0.58
NLGN3-204ENST00000476589 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
NLGN3-204ENST00000476589 UGGT2Q9NYU1 1516 aa18.66■□□□□ 0.58
NLGN3-204ENST00000476589 ANKRD30BQ9BXX2 1392 aa18.65■□□□□ 0.58
NLGN3-204ENST00000476589 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
NLGN3-204ENST00000476589 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
NLGN3-204ENST00000476589 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
NLGN3-204ENST00000476589 RPRD2Q5VT52 1461 aaKnown RBP18.63■□□□□ 0.57
NLGN3-204ENST00000476589 SPATA31E1Q6ZUB1 1445 aa18.63■□□□□ 0.57
NLGN3-204ENST00000476589 PDE4AP27815 886 aa18.63■□□□□ 0.57
NLGN3-204ENST00000476589 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
NLGN3-204ENST00000476589 MAGI3Q5TCQ9 1506 aa18.62■□□□□ 0.57
NLGN3-204ENST00000476589 GCC2Q8IWJ2 1684 aa18.62■□□□□ 0.57
NLGN3-204ENST00000476589 TCERG1O14776 1098 aaKnown RBP18.62■□□□□ 0.57
NLGN3-204ENST00000476589 RRP1P56182 461 aaKnown RBP18.62■□□□□ 0.57
NLGN3-204ENST00000476589 CUL7Q14999 1698 aa18.61■□□□□ 0.57
NLGN3-204ENST00000476589 USP47Q96K76 1375 aa18.61■□□□□ 0.57
NLGN3-204ENST00000476589 TEX14Q8IWB6 1497 aa18.61■□□□□ 0.57
NLGN3-204ENST00000476589 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
NLGN3-204ENST00000476589 CC2D2AQ9P2K1 1620 aa18.61■□□□□ 0.57
NLGN3-204ENST00000476589 TCOF1Q13428 1488 aaKnown RBP18.59■□□□□ 0.57
NLGN3-204ENST00000476589 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.57
NLGN3-204ENST00000476589 DNMBPQ6XZF7 1577 aa18.58■□□□□ 0.56
NLGN3-204ENST00000476589 PPM1GO15355 546 aaPredicted RBP18.55■□□□□ 0.56
NLGN3-204ENST00000476589 ZNF644Q9H582 1327 aaPredicted RBP18.55■□□□□ 0.56
NLGN3-204ENST00000476589 SAMD9Q5K651 1589 aa18.55■□□□□ 0.56
NLGN3-204ENST00000476589 BACH2Q9BYV9 841 aa18.55■□□□□ 0.56
NLGN3-204ENST00000476589 SKAP1Q86WV1 359 aa18.54■□□□□ 0.56
NLGN3-204ENST00000476589 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
NLGN3-204ENST00000476589 ARHGEF11O15085 1522 aa18.54■□□□□ 0.56
NLGN3-204ENST00000476589 MIA2Q96PC5 1412 aa18.54■□□□□ 0.56
NLGN3-204ENST00000476589 THOC2Q8NI27 1593 aaKnown RBP18.54■□□□□ 0.56
NLGN3-204ENST00000476589 NESP48681 1621 aa18.54■□□□□ 0.56
NLGN3-204ENST00000476589 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
NLGN3-204ENST00000476589 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.56
NLGN3-204ENST00000476589 CDK13Q14004 1512 aaKnown RBP18.52■□□□□ 0.55
NLGN3-204ENST00000476589 CARD11Q9BXL7 1154 aa18.5■□□□□ 0.55
NLGN3-204ENST00000476589 BRPF3Q9ULD4 1205 aa18.5■□□□□ 0.55
NLGN3-204ENST00000476589 KDM2AQ9Y2K7 1162 aa18.5■□□□□ 0.55
NLGN3-204ENST00000476589 PLIN1O60240 522 aa18.5■□□□□ 0.55
NLGN3-204ENST00000476589 DAPK1P53355 1430 aa18.49■□□□□ 0.55
NLGN3-204ENST00000476589 DAXXQ9UER7 740 aaPredicted RBP18.49■□□□□ 0.55
NLGN3-204ENST00000476589 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
NLGN3-204ENST00000476589 SLC4A3P48751 1232 aa18.48■□□□□ 0.55
NLGN3-204ENST00000476589 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
NLGN3-204ENST00000476589 EPRSP07814 1512 aaKnown RBP18.48■□□□□ 0.55
NLGN3-204ENST00000476589 MS4A1P11836 297 aa18.48■□□□□ 0.55
NLGN3-204ENST00000476589 PKD2Q13563 968 aa18.47■□□□□ 0.55
NLGN3-204ENST00000476589 MYBBP1AQ9BQG0 1328 aaKnown RBP18.47■□□□□ 0.55
NLGN3-204ENST00000476589 BCORL1Q5H9F3 1711 aa18.46■□□□□ 0.55
NLGN3-204ENST00000476589 CDCA7LQ96GN5 454 aa18.46■□□□□ 0.55
NLGN3-204ENST00000476589 POLR1AO95602 1720 aaPredicted RBP18.46■□□□□ 0.55
NLGN3-204ENST00000476589 ABCC5O15440 1437 aa18.45■□□□□ 0.54
NLGN3-204ENST00000476589 DDRGK1Q96HY6 314 aa18.45■□□□□ 0.54
NLGN3-204ENST00000476589 ST20-MTHFSA0A0A6YYL1 179 aa18.44■□□□□ 0.54
NLGN3-204ENST00000476589 ROCK2O75116 1388 aaKnown RBP18.44■□□□□ 0.54
NLGN3-204ENST00000476589 ROCK1Q13464 1354 aa18.44■□□□□ 0.54
NLGN3-204ENST00000476589 BRD4O60885 1362 aaPredicted RBP18.43■□□□□ 0.54
NLGN3-204ENST00000476589 WASHC2CQ9Y4E1 1318 aa18.43■□□□□ 0.54
NLGN3-204ENST00000476589 EIF5BO60841 1220 aaKnown RBP18.43■□□□□ 0.54
NLGN3-204ENST00000476589 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
NLGN3-204ENST00000476589 GSE1Q14687 1217 aa18.42■□□□□ 0.54
NLGN3-204ENST00000476589 RALBP1Q15311 655 aa18.42■□□□□ 0.54
NLGN3-204ENST00000476589 ARID4BQ4LE39 1312 aaPredicted RBP18.42■□□□□ 0.54
NLGN3-204ENST00000476589 CRBNQ96SW2 442 aa18.42■□□□□ 0.54
NLGN3-204ENST00000476589 NFKBIBQ15653 356 aa18.41■□□□□ 0.54
NLGN3-204ENST00000476589 CFDP1Q9UEE9 299 aaPredicted RBP18.39■□□□□ 0.53
NLGN3-204ENST00000476589 PZPP20742 1482 aa18.38■□□□□ 0.53
NLGN3-204ENST00000476589 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
NLGN3-204ENST00000476589 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
NLGN3-204ENST00000476589 FRAT1Q92837 279 aaPredicted RBP18.37■□□□□ 0.53
NLGN3-204ENST00000476589 KIAA1107Q9UPP5 1409 aa18.37■□□□□ 0.53
NLGN3-204ENST00000476589 URB2Q14146 1524 aaKnown RBP18.37■□□□□ 0.53
NLGN3-204ENST00000476589 MBD5Q9P267 1494 aa18.35■□□□□ 0.53
NLGN3-204ENST00000476589 DCAF11Q8TEB1 546 aa18.35■□□□□ 0.53
NLGN3-204ENST00000476589 CC2D1BQ5T0F9 858 aaKnown RBP18.34■□□□□ 0.53
NLGN3-204ENST00000476589 KDM5CP41229 1560 aa18.34■□□□□ 0.53
NLGN3-204ENST00000476589 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
NLGN3-204ENST00000476589 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
NLGN3-204ENST00000476589 DNMT1P26358 1616 aaKnown RBP18.32■□□□□ 0.52
NLGN3-204ENST00000476589 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
NLGN3-204ENST00000476589 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
NLGN3-204ENST00000476589 KIF14Q15058 1648 aa18.31■□□□□ 0.52
NLGN3-204ENST00000476589 WDR62O43379 1518 aa18.29■□□□□ 0.52
NLGN3-204ENST00000476589 RGS3P49796 1198 aa18.29■□□□□ 0.52
NLGN3-204ENST00000476589 NUP155O75694 1391 aa18.28■□□□□ 0.52
NLGN3-204ENST00000476589 RALGAPBQ86X10 1494 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms