RNA–Protein interactions for RNA: ENST00000476589.1

NLGN3-204, Transcript of neuroligin 3, humanhuman

TSL 1 (best)

Gene NLGN3, Length 3,153 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3-204ENST00000476589 NISCHQ9Y2I1 1504 aa26.72■■□□□ 1.87
NLGN3-204ENST00000476589 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
NLGN3-204ENST00000476589 SUPT5HO00267 1087 aaKnown RBP23.66■■□□□ 1.38
NLGN3-204ENST00000476589 HRCP23327 699 aa23.43■■□□□ 1.34
NLGN3-204ENST00000476589 PCGF6Q9BYE7 350 aa23.19■■□□□ 1.3
NLGN3-204ENST00000476589 MYO15BQ96JP2 1530 aa23.08■■□□□ 1.28
NLGN3-204ENST00000476589 PPARGC1BQ86YN6 1023 aaKnown RBP23.06■■□□□ 1.28
NLGN3-204ENST00000476589 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
NLGN3-204ENST00000476589 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.24
NLGN3-204ENST00000476589 ZCCHC6Q5VYS8 1495 aaKnown RBP22.67■■□□□ 1.22
NLGN3-204ENST00000476589 LOC105371045A0A1W2PR82 267 aa22.58■■□□□ 1.21
NLGN3-204ENST00000476589 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
NLGN3-204ENST00000476589 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.18
NLGN3-204ENST00000476589 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
NLGN3-204ENST00000476589 CCDC180Q9P1Z9 1646 aa22.17■■□□□ 1.14
NLGN3-204ENST00000476589 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
NLGN3-204ENST00000476589 SCAF1Q9H7N4 1312 aaKnown RBP22.06■■□□□ 1.12
NLGN3-204ENST00000476589 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
NLGN3-204ENST00000476589 FAM9AQ8IZU1 332 aaPredicted RBP21.93■■□□□ 1.1
NLGN3-204ENST00000476589 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
NLGN3-204ENST00000476589 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
NLGN3-204ENST00000476589 NEUROD1Q13562 356 aa21.57■■□□□ 1.04
NLGN3-204ENST00000476589 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.57■■□□□ 1.04
NLGN3-204ENST00000476589 CCER1Q8TC90 406 aaPredicted RBP21.55■■□□□ 1.04
NLGN3-204ENST00000476589 ABCC9O60706 1549 aa21.5■■□□□ 1.03
NLGN3-204ENST00000476589 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
NLGN3-204ENST00000476589 GTF3C3Q9Y5Q9 886 aa21.47■■□□□ 1.03
NLGN3-204ENST00000476589 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
NLGN3-204ENST00000476589 DIEXFQ68CQ4 756 aaKnown RBP21.4■■□□□ 1.02
NLGN3-204ENST00000476589 RB1CC1Q8TDY2 1594 aa21.38■■□□□ 1.01
NLGN3-204ENST00000476589 TTBK1Q5TCY1 1321 aaPredicted RBP21.36■■□□□ 1.01
NLGN3-204ENST00000476589 SCRIBQ14160 1630 aa21.31■■□□□ 1
NLGN3-204ENST00000476589 MYT1Q01538 1121 aa21.28■■□□□ 1
NLGN3-204ENST00000476589 YTHDC1Q96MU7 727 aaKnown RBP21.17■□□□□ 0.98
NLGN3-204ENST00000476589 ZNF316A6NFI3 1004 aaPredicted RBP21■□□□□ 0.95
NLGN3-204ENST00000476589 CECR2Q9BXF3 1484 aa20.98■□□□□ 0.95
NLGN3-204ENST00000476589 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
NLGN3-204ENST00000476589 MIER1Q8N108 512 aa20.86■□□□□ 0.93
NLGN3-204ENST00000476589 CEP162Q5TB80 1403 aa20.83■□□□□ 0.92
NLGN3-204ENST00000476589 UBTFP17480 764 aaKnown RBP20.82■□□□□ 0.92
NLGN3-204ENST00000476589 WIZO95785 1651 aa20.82■□□□□ 0.92
NLGN3-204ENST00000476589 WRNQ14191 1432 aaPredicted RBP eCLIP20.78■□□□□ 0.92
NLGN3-204ENST00000476589 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
NLGN3-204ENST00000476589 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
NLGN3-204ENST00000476589 ABCC8Q09428 1581 aa20.7■□□□□ 0.9
NLGN3-204ENST00000476589 SOGA1O94964 1423 aa20.66■□□□□ 0.9
NLGN3-204ENST00000476589 TNIKQ9UKE5 1360 aa20.65■□□□□ 0.9
NLGN3-204ENST00000476589 CSRNP3Q8WYN3 585 aa20.62■□□□□ 0.89
NLGN3-204ENST00000476589 BAZ1AQ9NRL2 1556 aaPredicted RBP20.59■□□□□ 0.89
NLGN3-204ENST00000476589 EIF4G1Q04637 1599 aaKnown RBP20.57■□□□□ 0.88
NLGN3-204ENST00000476589 RANGAP1P46060 587 aaPredicted RBP20.54■□□□□ 0.88
NLGN3-204ENST00000476589 RUSC2Q8N2Y8 1516 aa20.52■□□□□ 0.88
NLGN3-204ENST00000476589 NACADO15069 1562 aa20.5■□□□□ 0.87
NLGN3-204ENST00000476589 APLP2Q06481 763 aa20.48■□□□□ 0.87
NLGN3-204ENST00000476589 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
NLGN3-204ENST00000476589 SUPT16HQ9Y5B9 1047 aaKnown RBP20.43■□□□□ 0.86
NLGN3-204ENST00000476589 EEA1Q15075 1411 aa20.42■□□□□ 0.86
NLGN3-204ENST00000476589 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
NLGN3-204ENST00000476589 CLIP1P30622 1438 aa20.33■□□□□ 0.84
NLGN3-204ENST00000476589 SMARCA2P51531 1590 aa20.32■□□□□ 0.84
NLGN3-204ENST00000476589 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
NLGN3-204ENST00000476589 TSHZ2Q9NRE2 1034 aa20.28■□□□□ 0.84
NLGN3-204ENST00000476589 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
NLGN3-204ENST00000476589 VPS8Q8N3P4 1428 aa20.23■□□□□ 0.83
NLGN3-204ENST00000476589 ANP32EQ9BTT0 268 aa20.22■□□□□ 0.83
NLGN3-204ENST00000476589 BCANQ96GW7 911 aa20.21■□□□□ 0.83
NLGN3-204ENST00000476589 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
NLGN3-204ENST00000476589 DHX57Q6P158 1386 aaKnown RBP20.16■□□□□ 0.82
NLGN3-204ENST00000476589 KCNH8Q96L42 1107 aa20.1■□□□□ 0.81
NLGN3-204ENST00000476589 PABPN1Q86U42 306 aaKnown RBP eCLIP20.1■□□□□ 0.81
NLGN3-204ENST00000476589 ITGAEP38570 1179 aa20.08■□□□□ 0.81
NLGN3-204ENST00000476589 RAPGEF2Q9Y4G8 1499 aa20.08■□□□□ 0.8
NLGN3-204ENST00000476589 KIF21BO75037 1637 aa20.06■□□□□ 0.8
NLGN3-204ENST00000476589 BCL11AQ9H165 835 aa20.05■□□□□ 0.8
NLGN3-204ENST00000476589 FKBP8Q14318 412 aa20.03■□□□□ 0.8
NLGN3-204ENST00000476589 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
NLGN3-204ENST00000476589 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
NLGN3-204ENST00000476589 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
NLGN3-204ENST00000476589 NEFLP07196 543 aa19.93■□□□□ 0.78
NLGN3-204ENST00000476589 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
NLGN3-204ENST00000476589 RBM19Q9Y4C8 960 aaKnown RBP19.85■□□□□ 0.77
NLGN3-204ENST00000476589 TRIM52Q96A61 297 aa19.83■□□□□ 0.76
NLGN3-204ENST00000476589 CCNB3Q8WWL7 1395 aa19.81■□□□□ 0.76
NLGN3-204ENST00000476589 ARAP1Q96P48 1450 aa19.81■□□□□ 0.76
NLGN3-204ENST00000476589 HIRIP3Q9BW71 556 aaPredicted RBP19.79■□□□□ 0.76
NLGN3-204ENST00000476589 RRBP1Q9P2E9 1410 aaKnown RBP19.78■□□□□ 0.76
NLGN3-204ENST00000476589 RAB3GAP2Q9H2M9 1393 aa19.76■□□□□ 0.75
NLGN3-204ENST00000476589 SIN3AQ96ST3 1273 aa19.75■□□□□ 0.75
NLGN3-204ENST00000476589 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
NLGN3-204ENST00000476589 ANP32CO43423 234 aa19.69■□□□□ 0.74
NLGN3-204ENST00000476589 FAM50AQ14320 339 aaKnown RBP19.67■□□□□ 0.74
NLGN3-204ENST00000476589 CUX2O14529 1486 aa19.67■□□□□ 0.74
NLGN3-204ENST00000476589 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
NLGN3-204ENST00000476589 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
NLGN3-204ENST00000476589 ERICH6Q7L0X2 663 aa19.65■□□□□ 0.74
NLGN3-204ENST00000476589 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
NLGN3-204ENST00000476589 WDR97A6NE52 1622 aa19.63■□□□□ 0.73
NLGN3-204ENST00000476589 ERICH3Q5RHP9 1530 aa19.63■□□□□ 0.73
NLGN3-204ENST00000476589 PPP1R15AO75807 674 aaPredicted RBP19.63■□□□□ 0.73
NLGN3-204ENST00000476589 ATAD2BQ9ULI0 1458 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms