RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 NRDCO43847 1150 aa7.95□□□□□ -1.14
HNRNPU-208ENST00000475997 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
HNRNPU-208ENST00000475997 CHAF1AQ13111 956 aaPredicted RBP7.94□□□□□ -1.14
HNRNPU-208ENST00000475997 ZRSR1Q15695 479 aaKnown RBP7.94□□□□□ -1.14
HNRNPU-208ENST00000475997 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
HNRNPU-208ENST00000475997 FYCO1Q9BQS8 1478 aa7.94□□□□□ -1.14
HNRNPU-208ENST00000475997 DCAF11Q8TEB1 546 aa7.94□□□□□ -1.14
HNRNPU-208ENST00000475997 NCOA2Q15596 1464 aa7.94□□□□□ -1.14
HNRNPU-208ENST00000475997 L1TD1Q5T7N2 865 aaKnown RBP7.94□□□□□ -1.14
HNRNPU-208ENST00000475997 ZNF644Q9H582 1327 aaPredicted RBP7.93□□□□□ -1.14
HNRNPU-208ENST00000475997 POLA1P09884 1462 aaPredicted RBP7.93□□□□□ -1.14
HNRNPU-208ENST00000475997 RTN4Q9NQC3 1192 aaKnown RBP7.93□□□□□ -1.14
HNRNPU-208ENST00000475997 GOLGA6L6A8MZA4 724 aa7.92□□□□□ -1.14
HNRNPU-208ENST00000475997 MYH16Q9H6N6 1097 aa7.92□□□□□ -1.14
HNRNPU-208ENST00000475997 NOP58Q9Y2X3 529 aaKnown RBP7.92□□□□□ -1.14
HNRNPU-208ENST00000475997 MAPKBP1O60336 1514 aa7.92□□□□□ -1.14
HNRNPU-208ENST00000475997 TOPBP1Q92547 1522 aa7.92□□□□□ -1.14
HNRNPU-208ENST00000475997 PCF11O94913 1555 aaKnown RBP7.91□□□□□ -1.14
HNRNPU-208ENST00000475997 MAP3K1Q13233 1512 aa7.91□□□□□ -1.14
HNRNPU-208ENST00000475997 HFM1A2PYH4 1435 aa7.91□□□□□ -1.14
HNRNPU-208ENST00000475997 TNNT3P45378 269 aaPredicted RBP7.91□□□□□ -1.14
HNRNPU-208ENST00000475997 CCDC184Q52MB2 194 aa7.9□□□□□ -1.14
HNRNPU-208ENST00000475997 NUP155O75694 1391 aa7.9□□□□□ -1.15
HNRNPU-208ENST00000475997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.9□□□□□ -1.15
HNRNPU-208ENST00000475997 NAIPQ13075 1403 aa7.9□□□□□ -1.15
HNRNPU-208ENST00000475997 MSNP26038 577 aaKnown RBP7.89□□□□□ -1.15
HNRNPU-208ENST00000475997 EFCAB5A4FU69 1503 aa7.89□□□□□ -1.15
HNRNPU-208ENST00000475997 DEKP35659 375 aaKnown RBP7.89□□□□□ -1.15
HNRNPU-208ENST00000475997 CCDC7Q96M83 1385 aa7.88□□□□□ -1.15
HNRNPU-208ENST00000475997 NBPF8Q3BBV2 869 aa7.88□□□□□ -1.15
HNRNPU-208ENST00000475997 AQRO60306 1485 aaKnown RBP eCLIP7.88□□□□□ -1.159e-13■■■□□ 18.5
HNRNPU-208ENST00000475997 CC2D2AQ9P2K1 1620 aa7.88□□□□□ -1.15
HNRNPU-208ENST00000475997 CC2D1BQ5T0F9 858 aaKnown RBP7.88□□□□□ -1.15
HNRNPU-208ENST00000475997 KIF7Q2M1P5 1343 aa7.88□□□□□ -1.15
HNRNPU-208ENST00000475997 ABCA10Q8WWZ4 1543 aa7.87□□□□□ -1.15
HNRNPU-208ENST00000475997 WDR43Q15061 677 aaKnown RBP eCLIP7.87□□□□□ -1.152e-6■■□□□ 13.5
HNRNPU-208ENST00000475997 DNAJC5BQ9UF47 199 aa7.87□□□□□ -1.15
HNRNPU-208ENST00000475997 ZBED9Q6R2W3 1325 aa7.87□□□□□ -1.15
HNRNPU-208ENST00000475997 HNRNPMP52272 730 aaKnown RBP eCLIP7.87□□□□□ -1.15
HNRNPU-208ENST00000475997 PNNQ9H307 717 aaKnown RBP7.87□□□□□ -1.15
HNRNPU-208ENST00000475997 NUDCQ9Y266 331 aa7.87□□□□□ -1.15
HNRNPU-208ENST00000475997 ANKRD30AQ9BXX3 1397 aa7.86□□□□□ -1.15
HNRNPU-208ENST00000475997 ST20-MTHFSA0A0A6YYL1 179 aa7.86□□□□□ -1.15
HNRNPU-208ENST00000475997 C11orf95C9JLR9 678 aaPredicted RBP7.86□□□□□ -1.15
HNRNPU-208ENST00000475997 DNMBPQ6XZF7 1577 aa7.86□□□□□ -1.15
HNRNPU-208ENST00000475997 CHGAP10645 457 aaKnown RBP7.86□□□□□ -1.15
HNRNPU-208ENST00000475997 JPH4Q96JJ6 628 aa7.86□□□□□ -1.15
HNRNPU-208ENST00000475997 PTPRKQ15262 1439 aa7.85□□□□□ -1.15
HNRNPU-208ENST00000475997 CNTLNQ9NXG0 1405 aa7.85□□□□□ -1.15
HNRNPU-208ENST00000475997 USP47Q96K76 1375 aa7.84□□□□□ -1.15
HNRNPU-208ENST00000475997 ERCC6Q03468 1493 aa7.84□□□□□ -1.15
HNRNPU-208ENST00000475997 AMER1Q5JTC6 1135 aaPredicted RBP7.84□□□□□ -1.15
HNRNPU-208ENST00000475997 KNSTRNQ9Y448 316 aa7.83□□□□□ -1.16
HNRNPU-208ENST00000475997 PTMSP20962 102 aa7.83□□□□□ -1.16
HNRNPU-208ENST00000475997 CARMIL2Q6F5E8 1435 aa7.83□□□□□ -1.16
HNRNPU-208ENST00000475997 CASC1Q6TDU7 716 aa7.83□□□□□ -1.16
HNRNPU-208ENST00000475997 ROCK2O75116 1388 aaKnown RBP7.82□□□□□ -1.16
HNRNPU-208ENST00000475997 RCAN3Q9UKA8 241 aa7.82□□□□□ -1.16
HNRNPU-208ENST00000475997 LAS1LQ9Y4W2 734 aaKnown RBP7.82□□□□□ -1.16
HNRNPU-208ENST00000475997 RALBP1Q15311 655 aa7.82□□□□□ -1.16
HNRNPU-208ENST00000475997 EHBP1L1Q8N3D4 1523 aa7.82□□□□□ -1.16
HNRNPU-208ENST00000475997 FANCIQ9NVI1 1328 aa7.81□□□□□ -1.16
HNRNPU-208ENST00000475997 TMF1P82094 1093 aa7.81□□□□□ -1.16
HNRNPU-208ENST00000475997 SUPT6HQ7KZ85 1726 aaKnown RBP7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 CDK13Q14004 1512 aaKnown RBP7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 CALRP27797 417 aaKnown RBP7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 PLCB2Q00722 1185 aa7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 KTN1Q86UP2 1357 aaKnown RBP7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 NLRP13Q86W25 1043 aa7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 KIAA2012Q0VF49 1180 aa7.8□□□□□ -1.16
HNRNPU-208ENST00000475997 PTPN23Q9H3S7 1636 aa7.79□□□□□ -1.16
HNRNPU-208ENST00000475997 EPRSP07814 1512 aaKnown RBP7.79□□□□□ -1.16
HNRNPU-208ENST00000475997 USP35Q9P2H5 1018 aa7.79□□□□□ -1.16
HNRNPU-208ENST00000475997 PRDM2Q13029 1718 aa7.79□□□□□ -1.16
HNRNPU-208ENST00000475997 URB2Q14146 1524 aaKnown RBP7.79□□□□□ -1.16
HNRNPU-208ENST00000475997 HSP90AA2PQ14568 343 aaPredicted RBP7.79□□□□□ -1.16
HNRNPU-208ENST00000475997 CUL7Q14999 1698 aa7.78□□□□□ -1.16
HNRNPU-208ENST00000475997 KIF15Q9NS87 1388 aa7.78□□□□□ -1.16
HNRNPU-208ENST00000475997 MYBBP1AQ9BQG0 1328 aaKnown RBP7.78□□□□□ -1.16
HNRNPU-208ENST00000475997 EXOC6Q8TAG9 804 aa7.78□□□□□ -1.16
HNRNPU-208ENST00000475997 ANKRD30BQ9BXX2 1392 aa7.78□□□□□ -1.16
HNRNPU-208ENST00000475997 SENP3Q9H4L4 574 aaPredicted RBP7.78□□□□□ -1.16
HNRNPU-208ENST00000475997 PRG4Q92954 1404 aaPredicted RBP7.77□□□□□ -1.16
HNRNPU-208ENST00000475997 GRIN2BQ13224 1484 aa7.77□□□□□ -1.16
HNRNPU-208ENST00000475997 CDCA8Q53HL2 280 aa7.77□□□□□ -1.17
HNRNPU-208ENST00000475997 ANKRD50Q9ULJ7 1429 aa7.77□□□□□ -1.17
HNRNPU-208ENST00000475997 RGS3P49796 1198 aa7.77□□□□□ -1.17
HNRNPU-208ENST00000475997 DAPK1P53355 1430 aa7.77□□□□□ -1.17
HNRNPU-208ENST00000475997 NEUROD2Q15784 382 aa7.77□□□□□ -1.17
HNRNPU-208ENST00000475997 MSH5O43196 834 aa7.77□□□□□ -1.17
HNRNPU-208ENST00000475997 PLIN1O60240 522 aa7.76□□□□□ -1.17
HNRNPU-208ENST00000475997 HSP90AB1P08238 724 aaKnown RBP7.76□□□□□ -1.17
HNRNPU-208ENST00000475997 IPO9Q96P70 1041 aaKnown RBP7.76□□□□□ -1.17
HNRNPU-208ENST00000475997 CHMP4BQ9H444 224 aaKnown RBP7.76□□□□□ -1.17
HNRNPU-208ENST00000475997 AKNAQ7Z591 1439 aa7.76□□□□□ -1.17
HNRNPU-208ENST00000475997 ARID4BQ4LE39 1312 aaPredicted RBP7.76□□□□□ -1.17
HNRNPU-208ENST00000475997 PANK3Q9H999 370 aa7.76□□□□□ -1.17
HNRNPU-208ENST00000475997 PNISRQ8TF01 805 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms