RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-208ENST00000472749 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
ZIC4-208ENST00000472749 NCOA2Q15596 1464 aa13.12□□□□□ -0.31
ZIC4-208ENST00000472749 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
ZIC4-208ENST00000472749 ABCA10Q8WWZ4 1543 aa13.12□□□□□ -0.31
ZIC4-208ENST00000472749 WASHC2AQ641Q2 1341 aa13.11□□□□□ -0.31
ZIC4-208ENST00000472749 PRDM2Q13029 1718 aa13.11□□□□□ -0.31
ZIC4-208ENST00000472749 HFM1A2PYH4 1435 aa13.11□□□□□ -0.31
ZIC4-208ENST00000472749 NAIPQ13075 1403 aa13.11□□□□□ -0.31
ZIC4-208ENST00000472749 AQRO60306 1485 aaKnown RBP eCLIP13.11□□□□□ -0.31
ZIC4-208ENST00000472749 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
ZIC4-208ENST00000472749 RGL3Q3MIN7 710 aa13.1□□□□□ -0.31
ZIC4-208ENST00000472749 CCDC184Q52MB2 194 aa13.1□□□□□ -0.31
ZIC4-208ENST00000472749 MYOM3Q5VTT5 1437 aa13.1□□□□□ -0.31
ZIC4-208ENST00000472749 CFAP43Q8NDM7 1665 aa13.1□□□□□ -0.31
ZIC4-208ENST00000472749 CFDP1Q9UEE9 299 aaPredicted RBP13.09□□□□□ -0.31
ZIC4-208ENST00000472749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.09□□□□□ -0.31
ZIC4-208ENST00000472749 DNMBPQ6XZF7 1577 aa13.08□□□□□ -0.31
ZIC4-208ENST00000472749 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.32
ZIC4-208ENST00000472749 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
ZIC4-208ENST00000472749 C11orf95C9JLR9 678 aaPredicted RBP13.05□□□□□ -0.32
ZIC4-208ENST00000472749 RSPH6AQ9H0K4 717 aa13.05□□□□□ -0.32
ZIC4-208ENST00000472749 SNAPC4Q5SXM2 1469 aa13.05□□□□□ -0.32
ZIC4-208ENST00000472749 TMC1Q8TDI8 760 aa13.03□□□□□ -0.32
ZIC4-208ENST00000472749 PTPN23Q9H3S7 1636 aa13.03□□□□□ -0.32
ZIC4-208ENST00000472749 SENP3Q9H4L4 574 aaPredicted RBP13.03□□□□□ -0.32
ZIC4-208ENST00000472749 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.32
ZIC4-208ENST00000472749 PDS5BQ9NTI5 1447 aa13.02□□□□□ -0.33
ZIC4-208ENST00000472749 PKD2Q13563 968 aa13□□□□□ -0.33
ZIC4-208ENST00000472749 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
ZIC4-208ENST00000472749 NBPF8Q3BBV2 869 aa13□□□□□ -0.33
ZIC4-208ENST00000472749 CUL7Q14999 1698 aa12.98□□□□□ -0.33
ZIC4-208ENST00000472749 TSPY4P0CV99 314 aa12.98□□□□□ -0.33
ZIC4-208ENST00000472749 TSPY10P0CW01 314 aa12.98□□□□□ -0.33
ZIC4-208ENST00000472749 CARD11Q9BXL7 1154 aa12.98□□□□□ -0.33
ZIC4-208ENST00000472749 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
ZIC4-208ENST00000472749 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
ZIC4-208ENST00000472749 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
ZIC4-208ENST00000472749 GSE1Q14687 1217 aa12.96□□□□□ -0.33
ZIC4-208ENST00000472749 PLEKHD1A6NEE1 506 aa12.96□□□□□ -0.34
ZIC4-208ENST00000472749 CDK13Q14004 1512 aaKnown RBP12.96□□□□□ -0.34
ZIC4-208ENST00000472749 SUPT6HQ7KZ85 1726 aaKnown RBP12.95□□□□□ -0.34
ZIC4-208ENST00000472749 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
ZIC4-208ENST00000472749 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
ZIC4-208ENST00000472749 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
ZIC4-208ENST00000472749 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
ZIC4-208ENST00000472749 HSP90AA2PQ14568 343 aaPredicted RBP12.93□□□□□ -0.34
ZIC4-208ENST00000472749 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
ZIC4-208ENST00000472749 FRAT1Q92837 279 aaPredicted RBP12.92□□□□□ -0.34
ZIC4-208ENST00000472749 NAP1L5Q96NT1 182 aaPredicted RBP12.92□□□□□ -0.34
ZIC4-208ENST00000472749 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
ZIC4-208ENST00000472749 WASHC2CQ9Y4E1 1318 aa12.92□□□□□ -0.34
ZIC4-208ENST00000472749 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
ZIC4-208ENST00000472749 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
ZIC4-208ENST00000472749 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
ZIC4-208ENST00000472749 UGGT2Q9NYU1 1516 aa12.91□□□□□ -0.34
ZIC4-208ENST00000472749 CC2D1BQ5T0F9 858 aaKnown RBP12.91□□□□□ -0.34
ZIC4-208ENST00000472749 KDM6BO15054 1643 aa12.9□□□□□ -0.34
ZIC4-208ENST00000472749 LRRIQ1Q96JM4 1722 aa12.89□□□□□ -0.35
ZIC4-208ENST00000472749 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
ZIC4-208ENST00000472749 DENND4BO75064 1496 aaPredicted RBP12.89□□□□□ -0.35
ZIC4-208ENST00000472749 KDM5BQ9UGL1 1544 aa12.89□□□□□ -0.35
ZIC4-208ENST00000472749 ARXQ96QS3 562 aa12.89□□□□□ -0.35
ZIC4-208ENST00000472749 SAMD9Q5K651 1589 aa12.89□□□□□ -0.35
ZIC4-208ENST00000472749 NUP155O75694 1391 aa12.87□□□□□ -0.35
ZIC4-208ENST00000472749 RBM10P98175 930 aaKnown RBP12.87□□□□□ -0.35
ZIC4-208ENST00000472749 ANKRD30BQ9BXX2 1392 aa12.87□□□□□ -0.35
ZIC4-208ENST00000472749 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
ZIC4-208ENST00000472749 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
ZIC4-208ENST00000472749 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
ZIC4-208ENST00000472749 JPH4Q96JJ6 628 aa12.85□□□□□ -0.35
ZIC4-208ENST00000472749 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
ZIC4-208ENST00000472749 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
ZIC4-208ENST00000472749 ABCA5Q8WWZ7 1642 aa12.84□□□□□ -0.35
ZIC4-208ENST00000472749 NCOA1Q15788 1441 aa12.84□□□□□ -0.35
ZIC4-208ENST00000472749 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
ZIC4-208ENST00000472749 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
ZIC4-208ENST00000472749 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
ZIC4-208ENST00000472749 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
ZIC4-208ENST00000472749 DAPK1P53355 1430 aa12.83□□□□□ -0.35
ZIC4-208ENST00000472749 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.36
ZIC4-208ENST00000472749 ABCC5O15440 1437 aa12.83□□□□□ -0.36
ZIC4-208ENST00000472749 PDE4CQ08493 712 aa12.82□□□□□ -0.36
ZIC4-208ENST00000472749 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
ZIC4-208ENST00000472749 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
ZIC4-208ENST00000472749 TCOF1Q13428 1488 aaKnown RBP12.81□□□□□ -0.36
ZIC4-208ENST00000472749 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
ZIC4-208ENST00000472749 PRG4Q92954 1404 aaPredicted RBP12.81□□□□□ -0.36
ZIC4-208ENST00000472749 NFKBIBQ15653 356 aa12.81□□□□□ -0.36
ZIC4-208ENST00000472749 USP47Q96K76 1375 aa12.81□□□□□ -0.36
ZIC4-208ENST00000472749 RPRD2Q5VT52 1461 aaKnown RBP12.8□□□□□ -0.36
ZIC4-208ENST00000472749 ARHGEF11O15085 1522 aa12.79□□□□□ -0.36
ZIC4-208ENST00000472749 ZNF608Q9ULD9 1512 aaPredicted RBP12.78□□□□□ -0.36
ZIC4-208ENST00000472749 PLIN1O60240 522 aa12.77□□□□□ -0.36
ZIC4-208ENST00000472749 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
ZIC4-208ENST00000472749 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
ZIC4-208ENST00000472749 ROCK1Q13464 1354 aa12.76□□□□□ -0.37
ZIC4-208ENST00000472749 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
ZIC4-208ENST00000472749 FGD1P98174 961 aa12.75□□□□□ -0.37
ZIC4-208ENST00000472749 AAMPQ13685 434 aa12.75□□□□□ -0.37
ZIC4-208ENST00000472749 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms