RNA–Protein interactions for RNA: ENST00000472749.6

ZIC4-208, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,550 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-208ENST00000472749 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
ZIC4-208ENST00000472749 SHROOM4Q9ULL8 1493 aa16.9■□□□□ 0.3
ZIC4-208ENST00000472749 DCAF8L2P0C7V8 631 aa16.86■□□□□ 0.29
ZIC4-208ENST00000472749 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
ZIC4-208ENST00000472749 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
ZIC4-208ENST00000472749 HRCP23327 699 aa16.21■□□□□ 0.19
ZIC4-208ENST00000472749 PPARGC1BQ86YN6 1023 aaKnown RBP16.13■□□□□ 0.17
ZIC4-208ENST00000472749 MYT1Q01538 1121 aa15.96■□□□□ 0.15
ZIC4-208ENST00000472749 EHMT2Q96KQ7 1210 aa15.93■□□□□ 0.14
ZIC4-208ENST00000472749 PCGF6Q9BYE7 350 aa15.87■□□□□ 0.13
ZIC4-208ENST00000472749 ZCCHC6Q5VYS8 1495 aaKnown RBP15.79■□□□□ 0.12
ZIC4-208ENST00000472749 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
ZIC4-208ENST00000472749 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
ZIC4-208ENST00000472749 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
ZIC4-208ENST00000472749 MYO15BQ96JP2 1530 aa15.66■□□□□ 0.1
ZIC4-208ENST00000472749 LOC105371045A0A1W2PR82 267 aa15.65■□□□□ 0.1
ZIC4-208ENST00000472749 CCDC180Q9P1Z9 1646 aa15.57■□□□□ 0.08
ZIC4-208ENST00000472749 TTBK1Q5TCY1 1321 aaPredicted RBP15.35■□□□□ 0.05
ZIC4-208ENST00000472749 TRIM41Q8WV44 630 aa15.32■□□□□ 0.04
ZIC4-208ENST00000472749 GTF3C3Q9Y5Q9 886 aa15.22■□□□□ 0.03
ZIC4-208ENST00000472749 NEUROD1Q13562 356 aa15.17■□□□□ 0.02
ZIC4-208ENST00000472749 ACIN1Q9UKV3 1341 aaKnown RBP15.16■□□□□ 0.02
ZIC4-208ENST00000472749 TRIM26Q12899 539 aaPredicted RBP15.15■□□□□ 0.02
ZIC4-208ENST00000472749 DCAF1Q9Y4B6 1507 aa15.11■□□□□ 0.01
ZIC4-208ENST00000472749 BCL11AQ9H165 835 aa15.1■□□□□ 0.01
ZIC4-208ENST00000472749 ABCC9O60706 1549 aa15.02■□□□□ -0
ZIC4-208ENST00000472749 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
ZIC4-208ENST00000472749 CENPBP07199 599 aaPredicted RBP14.99□□□□□ -0.01
ZIC4-208ENST00000472749 RANGAP1P46060 587 aaPredicted RBP14.99□□□□□ -0.01
ZIC4-208ENST00000472749 RSF1Q96T23 1441 aaPredicted RBP14.99□□□□□ -0.01
ZIC4-208ENST00000472749 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
ZIC4-208ENST00000472749 PRKCSHP14314 528 aaPredicted RBP14.93□□□□□ -0.02
ZIC4-208ENST00000472749 CCER1Q8TC90 406 aaPredicted RBP14.86□□□□□ -0.03
ZIC4-208ENST00000472749 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
ZIC4-208ENST00000472749 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
ZIC4-208ENST00000472749 UBTFP17480 764 aaKnown RBP14.8□□□□□ -0.04
ZIC4-208ENST00000472749 YTHDC1Q96MU7 727 aaKnown RBP14.8□□□□□ -0.04
ZIC4-208ENST00000472749 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.04
ZIC4-208ENST00000472749 CECR2Q9BXF3 1484 aa14.77□□□□□ -0.05
ZIC4-208ENST00000472749 DIEXFQ68CQ4 756 aaKnown RBP14.67□□□□□ -0.06
ZIC4-208ENST00000472749 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
ZIC4-208ENST00000472749 ANP32EQ9BTT0 268 aa14.63□□□□□ -0.07
ZIC4-208ENST00000472749 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
ZIC4-208ENST00000472749 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.07
ZIC4-208ENST00000472749 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
ZIC4-208ENST00000472749 WIZO95785 1651 aa14.56□□□□□ -0.08
ZIC4-208ENST00000472749 APLP2Q06481 763 aa14.54□□□□□ -0.08
ZIC4-208ENST00000472749 NACADO15069 1562 aa14.51□□□□□ -0.09
ZIC4-208ENST00000472749 ERICH6Q7L0X2 663 aa14.49□□□□□ -0.09
ZIC4-208ENST00000472749 ABCC8Q09428 1581 aa14.41□□□□□ -0.1
ZIC4-208ENST00000472749 ITGAEP38570 1179 aa14.39□□□□□ -0.11
ZIC4-208ENST00000472749 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
ZIC4-208ENST00000472749 SOGA1O94964 1423 aa14.36□□□□□ -0.11
ZIC4-208ENST00000472749 ATP1B4Q9UN42 357 aaPredicted RBP14.35□□□□□ -0.11
ZIC4-208ENST00000472749 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
ZIC4-208ENST00000472749 CEP162Q5TB80 1403 aa14.32□□□□□ -0.12
ZIC4-208ENST00000472749 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
ZIC4-208ENST00000472749 RUSC2Q8N2Y8 1516 aa14.27□□□□□ -0.13
ZIC4-208ENST00000472749 MIER1Q8N108 512 aa14.23□□□□□ -0.13
ZIC4-208ENST00000472749 TOP2AP11388 1531 aaKnown RBP14.21□□□□□ -0.13
ZIC4-208ENST00000472749 TNIKQ9UKE5 1360 aa14.21□□□□□ -0.13
ZIC4-208ENST00000472749 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.14
ZIC4-208ENST00000472749 ANO8Q9HCE9 1232 aaPredicted RBP14.19□□□□□ -0.14
ZIC4-208ENST00000472749 SMARCA4P51532 1647 aa14.18□□□□□ -0.14
ZIC4-208ENST00000472749 SMARCA2P51531 1590 aa14.17□□□□□ -0.14
ZIC4-208ENST00000472749 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
ZIC4-208ENST00000472749 BCANQ96GW7 911 aa14.16□□□□□ -0.14
ZIC4-208ENST00000472749 EIF4G1Q04637 1599 aaKnown RBP14.15□□□□□ -0.14
ZIC4-208ENST00000472749 WRNQ14191 1432 aaPredicted RBP eCLIP14.15□□□□□ -0.14
ZIC4-208ENST00000472749 GOLGA3Q08378 1498 aa14.1□□□□□ -0.15
ZIC4-208ENST00000472749 P3H3Q8IVL6 736 aa14.08□□□□□ -0.16
ZIC4-208ENST00000472749 EEA1Q15075 1411 aa14.08□□□□□ -0.16
ZIC4-208ENST00000472749 CLIP1P30622 1438 aa14.06□□□□□ -0.16
ZIC4-208ENST00000472749 CCDC136Q96JN2 1154 aa14.04□□□□□ -0.16
ZIC4-208ENST00000472749 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
ZIC4-208ENST00000472749 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
ZIC4-208ENST00000472749 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
ZIC4-208ENST00000472749 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.18
ZIC4-208ENST00000472749 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
ZIC4-208ENST00000472749 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
ZIC4-208ENST00000472749 SYNJ1O43426 1573 aa13.93□□□□□ -0.18
ZIC4-208ENST00000472749 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
ZIC4-208ENST00000472749 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
ZIC4-208ENST00000472749 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
ZIC4-208ENST00000472749 KANK4Q5T7N3 995 aaPredicted RBP13.88□□□□□ -0.19
ZIC4-208ENST00000472749 DEKP35659 375 aaKnown RBP13.88□□□□□ -0.19
ZIC4-208ENST00000472749 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
ZIC4-208ENST00000472749 BICRAQ9NZM4 1560 aa13.88□□□□□ -0.19
ZIC4-208ENST00000472749 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
ZIC4-208ENST00000472749 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
ZIC4-208ENST00000472749 CLSPNQ9HAW4 1339 aa13.86□□□□□ -0.19
ZIC4-208ENST00000472749 ARID3CA6NKF2 412 aa13.86□□□□□ -0.19
ZIC4-208ENST00000472749 FKBP8Q14318 412 aa13.86□□□□□ -0.19
ZIC4-208ENST00000472749 MSH5O43196 834 aa13.84□□□□□ -0.19
ZIC4-208ENST00000472749 RTN4Q9NQC3 1192 aaKnown RBP13.83□□□□□ -0.2
ZIC4-208ENST00000472749 KIF21BO75037 1637 aa13.79□□□□□ -0.2
ZIC4-208ENST00000472749 NBR1Q14596 966 aa13.75□□□□□ -0.21
ZIC4-208ENST00000472749 DDX10Q13206 875 aaKnown RBP13.75□□□□□ -0.21
ZIC4-208ENST00000472749 NEFLP07196 543 aa13.73□□□□□ -0.21
ZIC4-208ENST00000472749 DHX57Q6P158 1386 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms