RNA–Protein interactions for RNA: ENST00000470736.1

UBE4B-207, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-207ENST00000470736 WRNQ14191 1432 aaPredicted RBP eCLIP9.24□□□□□ -0.93
UBE4B-207ENST00000470736 GSE1Q14687 1217 aa9.24□□□□□ -0.93
UBE4B-207ENST00000470736 OCEL1Q9H607 264 aa9.24□□□□□ -0.93
UBE4B-207ENST00000470736 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
UBE4B-207ENST00000470736 SLAIN1Q8ND83 568 aa9.23□□□□□ -0.93
UBE4B-207ENST00000470736 SYNJ1O43426 1573 aa9.21□□□□□ -0.93
UBE4B-207ENST00000470736 SNPHO15079 494 aa9.21□□□□□ -0.94
UBE4B-207ENST00000470736 ZNF467Q7Z7K2 595 aaPredicted RBP9.21□□□□□ -0.94
UBE4B-207ENST00000470736 TMEM121BQ9BXQ6 578 aaPredicted RBP9.2□□□□□ -0.94
UBE4B-207ENST00000470736 TOP2BQ02880 1626 aa9.2□□□□□ -0.94
UBE4B-207ENST00000470736 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
UBE4B-207ENST00000470736 PYGBP11216 843 aa9.19□□□□□ -0.94
UBE4B-207ENST00000470736 CHRM1P11229 460 aaPredicted RBP9.19□□□□□ -0.94
UBE4B-207ENST00000470736 CHD1O14646 1710 aa9.18□□□□□ -0.94
UBE4B-207ENST00000470736 PBRM1Q86U86 1689 aa9.17□□□□□ -0.94
UBE4B-207ENST00000470736 WDR97A6NE52 1622 aa9.17□□□□□ -0.94
UBE4B-207ENST00000470736 SNAPC4Q5SXM2 1469 aa9.17□□□□□ -0.94
UBE4B-207ENST00000470736 VASPP50552 380 aaPredicted RBP9.17□□□□□ -0.94
UBE4B-207ENST00000470736 GAPVD1Q14C86 1478 aa9.16□□□□□ -0.94
UBE4B-207ENST00000470736 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
UBE4B-207ENST00000470736 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.16□□□□□ -0.94
UBE4B-207ENST00000470736 ABCA10Q8WWZ4 1543 aa9.15□□□□□ -0.94
UBE4B-207ENST00000470736 GRIN2BQ13224 1484 aa9.15□□□□□ -0.94
UBE4B-207ENST00000470736 KLHL34Q8N239 644 aa9.15□□□□□ -0.94
UBE4B-207ENST00000470736 ST18O60284 1047 aa9.14□□□□□ -0.95
UBE4B-207ENST00000470736 CDAN1Q8IWY9 1227 aa9.14□□□□□ -0.95
UBE4B-207ENST00000470736 TRIM41Q8WV44 630 aa9.13□□□□□ -0.95
UBE4B-207ENST00000470736 L3MBTL3Q96JM7 780 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-207ENST00000470736 PCDHB8Q9UN66 801 aa9.13□□□□□ -0.95
UBE4B-207ENST00000470736 MAGI1Q96QZ7 1491 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-207ENST00000470736 ABCA5Q8WWZ7 1642 aa9.13□□□□□ -0.95
UBE4B-207ENST00000470736 GOLGA2Q08379 1002 aa9.12□□□□□ -0.95
UBE4B-207ENST00000470736 MKRN3Q13064 507 aaKnown RBP9.11□□□□□ -0.95
UBE4B-207ENST00000470736 SYNJ2O15056 1496 aa9.09□□□□□ -0.95
UBE4B-207ENST00000470736 PDCD7Q8N8D1 485 aaKnown RBP9.08□□□□□ -0.96
UBE4B-207ENST00000470736 C3orf67Q6ZVT6 689 aa9.07□□□□□ -0.96
UBE4B-207ENST00000470736 ADAMTS12P58397 1594 aa9.07□□□□□ -0.96
UBE4B-207ENST00000470736 KIF27Q86VH2 1401 aa9.05□□□□□ -0.96
UBE4B-207ENST00000470736 RIMBP3CA6NJZ7 1639 aa9.05□□□□□ -0.96
UBE4B-207ENST00000470736 RIMBP3BA6NNM3 1639 aa9.05□□□□□ -0.96
UBE4B-207ENST00000470736 RIMBP3Q9UFD9 1639 aa9.05□□□□□ -0.96
UBE4B-207ENST00000470736 PSEN1P49768 467 aa9.05□□□□□ -0.96
UBE4B-207ENST00000470736 PDAP1Q13442 181 aaKnown RBP9.05□□□□□ -0.96
UBE4B-207ENST00000470736 ERICH3Q5RHP9 1530 aa9.05□□□□□ -0.96
UBE4B-207ENST00000470736 GRIN2AQ12879 1464 aa9.04□□□□□ -0.96
UBE4B-207ENST00000470736 ILDR1Q86SU0 546 aaPredicted RBP9.04□□□□□ -0.96
UBE4B-207ENST00000470736 ARHGEF11O15085 1522 aa9.04□□□□□ -0.96
UBE4B-207ENST00000470736 FHAD1B1AJZ9 1412 aa9.04□□□□□ -0.96
UBE4B-207ENST00000470736 SPOCK2Q92563 424 aa9.02□□□□□ -0.97
UBE4B-207ENST00000470736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.02□□□□□ -0.973e-9■■□□□ 13.2
UBE4B-207ENST00000470736 CLASP1Q7Z460 1538 aa9.01□□□□□ -0.97
UBE4B-207ENST00000470736 CYB5RLQ6IPT4 315 aa9.01□□□□□ -0.97
UBE4B-207ENST00000470736 CUL7Q14999 1698 aa9□□□□□ -0.97
UBE4B-207ENST00000470736 CEP170Q5SW79 1584 aa8.99□□□□□ -0.97
UBE4B-207ENST00000470736 IGF1RP08069 1367 aa8.98□□□□□ -0.97
UBE4B-207ENST00000470736 G3V3G9 751 aa8.96□□□□□ -0.98
UBE4B-207ENST00000470736 CARMIL1Q5VZK9 1371 aa8.96□□□□□ -0.98
UBE4B-207ENST00000470736 NUP160Q12769 1436 aa8.96□□□□□ -0.98
UBE4B-207ENST00000470736 ARAP1Q96P48 1450 aa8.96□□□□□ -0.98
UBE4B-207ENST00000470736 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
UBE4B-207ENST00000470736 FAM9AQ8IZU1 332 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-207ENST00000470736 TTBK1Q5TCY1 1321 aaPredicted RBP8.94□□□□□ -0.98
UBE4B-207ENST00000470736 EMP3P54852 163 aa8.93□□□□□ -0.98
UBE4B-207ENST00000470736 IFNLR1Q8IU57 520 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-207ENST00000470736 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
UBE4B-207ENST00000470736 CIZ1Q9ULV3 898 aaPredicted RBP8.93□□□□□ -0.98
UBE4B-207ENST00000470736 PRG4Q92954 1404 aaPredicted RBP8.92□□□□□ -0.98
UBE4B-207ENST00000470736 ERCC6L2Q5T890 1561 aa8.91□□□□□ -0.98
UBE4B-207ENST00000470736 MMRN1Q13201 1228 aa8.91□□□□□ -0.98
UBE4B-207ENST00000470736 MARVELD3Q96A59 401 aa8.91□□□□□ -0.98
UBE4B-207ENST00000470736 JPH4Q96JJ6 628 aa8.91□□□□□ -0.98
UBE4B-207ENST00000470736 CABP2Q9NPB3 220 aa8.91□□□□□ -0.98
UBE4B-207ENST00000470736 BOLA1Q9Y3E2 137 aa8.91□□□□□ -0.98
UBE4B-207ENST00000470736 RAPGEF2Q9Y4G8 1499 aa8.9□□□□□ -0.98
UBE4B-207ENST00000470736 SHROOM2Q13796 1616 aa8.9□□□□□ -0.99
UBE4B-207ENST00000470736 KIAA0586Q9BVV6 1533 aa8.89□□□□□ -0.99
UBE4B-207ENST00000470736 IQGAP2Q13576 1575 aa8.87□□□□□ -0.99
UBE4B-207ENST00000470736 DOK7Q18PE1 504 aa8.86□□□□□ -0.99
UBE4B-207ENST00000470736 CTTNBP2Q8WZ74 1663 aa8.85□□□□□ -0.99
UBE4B-207ENST00000470736 RANGAP1P46060 587 aaPredicted RBP8.85□□□□□ -0.99
UBE4B-207ENST00000470736 HS3ST6Q96QI5 342 aa8.85□□□□□ -0.99
UBE4B-207ENST00000470736 CARMIL2Q6F5E8 1435 aa8.85□□□□□ -0.99
UBE4B-207ENST00000470736 EEA1Q15075 1411 aa8.84□□□□□ -0.99
UBE4B-207ENST00000470736 RIMBP2O15034 1052 aa8.83□□□□□ -1
UBE4B-207ENST00000470736 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
UBE4B-207ENST00000470736 HOXB3P14651 431 aaPredicted RBP8.82□□□□□ -1
UBE4B-207ENST00000470736 HOXB1P14653 301 aaPredicted RBP8.82□□□□□ -1
UBE4B-207ENST00000470736 ZNF710Q8N1W2 664 aa8.82□□□□□ -1
UBE4B-207ENST00000470736 PTPRGP23470 1445 aa8.81□□□□□ -1
UBE4B-207ENST00000470736 FAM205CA6NFA0 338 aa8.81□□□□□ -1
UBE4B-207ENST00000470736 SOX12O15370 315 aa8.81□□□□□ -1
UBE4B-207ENST00000470736 ZSWIM6Q9HCJ5 1215 aa8.81□□□□□ -1
UBE4B-207ENST00000470736 PRXQ9BXM0 1461 aa8.81□□□□□ -1
UBE4B-207ENST00000470736 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
UBE4B-207ENST00000470736 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
UBE4B-207ENST00000470736 TNIKQ9UKE5 1360 aa8.8□□□□□ -1
UBE4B-207ENST00000470736 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
UBE4B-207ENST00000470736 P3H3Q8IVL6 736 aa8.79□□□□□ -1
UBE4B-207ENST00000470736 KIAA0556O60303 1618 aa8.78□□□□□ -1
UBE4B-207ENST00000470736 UGGT2Q9NYU1 1516 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms