RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 PKD2Q13563 968 aa13.66□□□□□ -0.22
TRAPPC10-207ENST00000468864 DNTTIP2Q5QJE6 756 aaKnown RBP13.66□□□□□ -0.22
TRAPPC10-207ENST00000468864 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
TRAPPC10-207ENST00000468864 FHAD1B1AJZ9 1412 aa13.65□□□□□ -0.22
TRAPPC10-207ENST00000468864 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
TRAPPC10-207ENST00000468864 CUX2O14529 1486 aa13.65□□□□□ -0.22
TRAPPC10-207ENST00000468864 ZBTB7CA1YPR0 619 aa13.64□□□□□ -0.23
TRAPPC10-207ENST00000468864 GSE1Q14687 1217 aa13.63□□□□□ -0.23
TRAPPC10-207ENST00000468864 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
TRAPPC10-207ENST00000468864 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
TRAPPC10-207ENST00000468864 PLEKHD1A6NEE1 506 aa13.63□□□□□ -0.23
TRAPPC10-207ENST00000468864 ARHGAP35Q9NRY4 1499 aa13.63□□□□□ -0.23
TRAPPC10-207ENST00000468864 TOP2BQ02880 1626 aa13.63□□□□□ -0.23
TRAPPC10-207ENST00000468864 HSP90AB1P08238 724 aaKnown RBP13.62□□□□□ -0.23
TRAPPC10-207ENST00000468864 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
TRAPPC10-207ENST00000468864 L1TD1Q5T7N2 865 aaKnown RBP13.62□□□□□ -0.23
TRAPPC10-207ENST00000468864 PLCB2Q00722 1185 aa13.61□□□□□ -0.23
TRAPPC10-207ENST00000468864 CC2D2AQ9P2K1 1620 aa13.6□□□□□ -0.23
TRAPPC10-207ENST00000468864 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC10-207ENST00000468864 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
TRAPPC10-207ENST00000468864 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
TRAPPC10-207ENST00000468864 CLUAP1Q96AJ1 413 aa13.58□□□□□ -0.23
TRAPPC10-207ENST00000468864 BRPF3Q9ULD4 1205 aa13.58□□□□□ -0.24
TRAPPC10-207ENST00000468864 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
TRAPPC10-207ENST00000468864 TMF1P82094 1093 aa13.57□□□□□ -0.24
TRAPPC10-207ENST00000468864 CRBNQ96SW2 442 aa13.57□□□□□ -0.24
TRAPPC10-207ENST00000468864 HSCBQ8IWL3 235 aa13.57□□□□□ -0.24
TRAPPC10-207ENST00000468864 STAG3Q9UJ98 1225 aa13.57□□□□□ -0.24
TRAPPC10-207ENST00000468864 CCDC146Q8IYE0 955 aa13.57□□□□□ -0.24
TRAPPC10-207ENST00000468864 KTN1Q86UP2 1357 aaKnown RBP13.56□□□□□ -0.24
TRAPPC10-207ENST00000468864 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
TRAPPC10-207ENST00000468864 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
TRAPPC10-207ENST00000468864 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
TRAPPC10-207ENST00000468864 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
TRAPPC10-207ENST00000468864 CFAP53Q96M91 514 aa13.55□□□□□ -0.24
TRAPPC10-207ENST00000468864 WASHC2AQ641Q2 1341 aa13.55□□□□□ -0.24
TRAPPC10-207ENST00000468864 RALBP1Q15311 655 aa13.55□□□□□ -0.24
TRAPPC10-207ENST00000468864 VSIG10Q8N0Z9 540 aa13.55□□□□□ -0.24
TRAPPC10-207ENST00000468864 FMN1Q68DA7 1419 aa13.54□□□□□ -0.24
TRAPPC10-207ENST00000468864 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
TRAPPC10-207ENST00000468864 GOLGA6L3A6NEY3 463 aa13.53□□□□□ -0.24
TRAPPC10-207ENST00000468864 MFAP1P55081 439 aaKnown RBP13.53□□□□□ -0.24
TRAPPC10-207ENST00000468864 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
TRAPPC10-207ENST00000468864 NFKBIBQ15653 356 aa13.52□□□□□ -0.25
TRAPPC10-207ENST00000468864 MSNP26038 577 aaKnown RBP13.52□□□□□ -0.25
TRAPPC10-207ENST00000468864 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
TRAPPC10-207ENST00000468864 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
TRAPPC10-207ENST00000468864 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
TRAPPC10-207ENST00000468864 BCL2L13Q9BXK5 485 aa13.49□□□□□ -0.25
TRAPPC10-207ENST00000468864 APBB1O00213 710 aa13.49□□□□□ -0.25
TRAPPC10-207ENST00000468864 MAPK8IP3Q9UPT6 1336 aa13.48□□□□□ -0.25
TRAPPC10-207ENST00000468864 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC10-207ENST00000468864 PDE3BQ13370 1112 aa13.48□□□□□ -0.25
TRAPPC10-207ENST00000468864 HSP90AA2PQ14568 343 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC10-207ENST00000468864 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
TRAPPC10-207ENST00000468864 ROCK2O75116 1388 aaKnown RBP13.48□□□□□ -0.25
TRAPPC10-207ENST00000468864 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
TRAPPC10-207ENST00000468864 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
TRAPPC10-207ENST00000468864 NUP155O75694 1391 aa13.47□□□□□ -0.25
TRAPPC10-207ENST00000468864 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
TRAPPC10-207ENST00000468864 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.25
TRAPPC10-207ENST00000468864 AKNAQ7Z591 1439 aa13.46□□□□□ -0.25
TRAPPC10-207ENST00000468864 RSPH6AQ9H0K4 717 aa13.46□□□□□ -0.25
TRAPPC10-207ENST00000468864 SAFB2Q14151 953 aaKnown RBP eCLIP13.46□□□□□ -0.26
TRAPPC10-207ENST00000468864 MYBBP1AQ9BQG0 1328 aaKnown RBP13.45□□□□□ -0.26
TRAPPC10-207ENST00000468864 MORC1Q86VD1 984 aa13.45□□□□□ -0.26
TRAPPC10-207ENST00000468864 RRP7AQ9Y3A4 280 aaKnown RBP13.45□□□□□ -0.26
TRAPPC10-207ENST00000468864 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC10-207ENST00000468864 COG6Q9Y2V7 657 aa13.44□□□□□ -0.26
TRAPPC10-207ENST00000468864 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
TRAPPC10-207ENST00000468864 MS4A1P11836 297 aa13.44□□□□□ -0.26
TRAPPC10-207ENST00000468864 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC10-207ENST00000468864 SKAP1Q86WV1 359 aa13.44□□□□□ -0.26
TRAPPC10-207ENST00000468864 PANK3Q9H999 370 aa13.44□□□□□ -0.26
TRAPPC10-207ENST00000468864 ITPRIPQ8IWB1 547 aa13.43□□□□□ -0.26
TRAPPC10-207ENST00000468864 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
TRAPPC10-207ENST00000468864 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
TRAPPC10-207ENST00000468864 U2AF1L5P0DN76 240 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC10-207ENST00000468864 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRAPPC10-207ENST00000468864 PKNOX2Q96KN3 472 aa13.42□□□□□ -0.26
TRAPPC10-207ENST00000468864 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
TRAPPC10-207ENST00000468864 GBP4Q96PP9 640 aa13.42□□□□□ -0.26
TRAPPC10-207ENST00000468864 PODXL2Q9NZ53 605 aa13.42□□□□□ -0.26
TRAPPC10-207ENST00000468864 ERICH3Q5RHP9 1530 aa13.41□□□□□ -0.26
TRAPPC10-207ENST00000468864 USP47Q96K76 1375 aa13.41□□□□□ -0.26
TRAPPC10-207ENST00000468864 CASC1Q6TDU7 716 aa13.4□□□□□ -0.26
TRAPPC10-207ENST00000468864 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
TRAPPC10-207ENST00000468864 APAF1O14727 1248 aa13.4□□□□□ -0.26
TRAPPC10-207ENST00000468864 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC10-207ENST00000468864 UBE2Q2Q8WVN8 375 aa13.39□□□□□ -0.27
TRAPPC10-207ENST00000468864 TAOK2Q9UL54 1235 aa13.38□□□□□ -0.27
TRAPPC10-207ENST00000468864 FOXD4L5Q5VV16 416 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC10-207ENST00000468864 FOXD4L4Q8WXT5 416 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC10-207ENST00000468864 SMC4Q9NTJ3 1288 aa13.37□□□□□ -0.27
TRAPPC10-207ENST00000468864 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
TRAPPC10-207ENST00000468864 BACH2Q9BYV9 841 aa13.36□□□□□ -0.27
TRAPPC10-207ENST00000468864 CNTLNQ9NXG0 1405 aa13.36□□□□□ -0.27
TRAPPC10-207ENST00000468864 ARAP1Q96P48 1450 aa13.35□□□□□ -0.27
TRAPPC10-207ENST00000468864 NBPF8Q3BBV2 869 aa13.35□□□□□ -0.27
TRAPPC10-207ENST00000468864 CFTRP13569 1480 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms