RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 NISCHQ9Y2I1 1504 aa18.5■□□□□ 0.55
TRAPPC10-207ENST00000468864 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
TRAPPC10-207ENST00000468864 SUPT5HO00267 1087 aaKnown RBP17.8■□□□□ 0.44
TRAPPC10-207ENST00000468864 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
TRAPPC10-207ENST00000468864 PCGF6Q9BYE7 350 aa17.23■□□□□ 0.35
TRAPPC10-207ENST00000468864 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
TRAPPC10-207ENST00000468864 FAM9AQ8IZU1 332 aaPredicted RBP16.77■□□□□ 0.27
TRAPPC10-207ENST00000468864 HRCP23327 699 aa16.67■□□□□ 0.26
TRAPPC10-207ENST00000468864 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC10-207ENST00000468864 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
TRAPPC10-207ENST00000468864 PELP1Q8IZL8 1130 aaKnown RBP16.53■□□□□ 0.24
TRAPPC10-207ENST00000468864 CCDC180Q9P1Z9 1646 aa16.4■□□□□ 0.22
TRAPPC10-207ENST00000468864 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.22
TRAPPC10-207ENST00000468864 CCER1Q8TC90 406 aaPredicted RBP16.39■□□□□ 0.22
TRAPPC10-207ENST00000468864 ZEB1P37275 1124 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC10-207ENST00000468864 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
TRAPPC10-207ENST00000468864 YTHDC1Q96MU7 727 aaKnown RBP16.32■□□□□ 0.2
TRAPPC10-207ENST00000468864 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
TRAPPC10-207ENST00000468864 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
TRAPPC10-207ENST00000468864 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC10-207ENST00000468864 MYT1Q01538 1121 aa16.23■□□□□ 0.19
TRAPPC10-207ENST00000468864 APLP2Q06481 763 aa16.14■□□□□ 0.17
TRAPPC10-207ENST00000468864 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC10-207ENST00000468864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
TRAPPC10-207ENST00000468864 UBTFP17480 764 aaKnown RBP15.91■□□□□ 0.14
TRAPPC10-207ENST00000468864 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
TRAPPC10-207ENST00000468864 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.13
TRAPPC10-207ENST00000468864 DIEXFQ68CQ4 756 aaKnown RBP15.82■□□□□ 0.12
TRAPPC10-207ENST00000468864 ZCCHC6Q5VYS8 1495 aaKnown RBP15.82■□□□□ 0.12
TRAPPC10-207ENST00000468864 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
TRAPPC10-207ENST00000468864 HNRNPUL2Q1KMD3 747 aaKnown RBP15.73■□□□□ 0.11
TRAPPC10-207ENST00000468864 NEFLP07196 543 aa15.7■□□□□ 0.1
TRAPPC10-207ENST00000468864 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC10-207ENST00000468864 ACIN1Q9UKV3 1341 aaKnown RBP15.62■□□□□ 0.09
TRAPPC10-207ENST00000468864 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
TRAPPC10-207ENST00000468864 ITGAEP38570 1179 aa15.58■□□□□ 0.08
TRAPPC10-207ENST00000468864 NEUROD1Q13562 356 aa15.49■□□□□ 0.07
TRAPPC10-207ENST00000468864 BCANQ96GW7 911 aa15.49■□□□□ 0.07
TRAPPC10-207ENST00000468864 MYO15BQ96JP2 1530 aa15.42■□□□□ 0.06
TRAPPC10-207ENST00000468864 CNGB1Q14028 1251 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC10-207ENST00000468864 ZNF316A6NFI3 1004 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC10-207ENST00000468864 POLR3GLQ9BT43 218 aa15.23■□□□□ 0.03
TRAPPC10-207ENST00000468864 MIER1Q8N108 512 aa15.11■□□□□ 0.01
TRAPPC10-207ENST00000468864 FKBP8Q14318 412 aa15.03■□□□□ -0
TRAPPC10-207ENST00000468864 RTL5Q5HYW3 569 aaPredicted RBP15.03■□□□□ -0
TRAPPC10-207ENST00000468864 FAM50AQ14320 339 aaKnown RBP15.02■□□□□ -0
TRAPPC10-207ENST00000468864 DAXXQ9UER7 740 aaPredicted RBP15□□□□□ -0.01
TRAPPC10-207ENST00000468864 ABCC9O60706 1549 aa14.99□□□□□ -0.01
TRAPPC10-207ENST00000468864 CDK11AQ9UQ88 783 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC10-207ENST00000468864 ANP32CO43423 234 aa14.96□□□□□ -0.01
TRAPPC10-207ENST00000468864 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
TRAPPC10-207ENST00000468864 NACADO15069 1562 aa14.9□□□□□ -0.02
TRAPPC10-207ENST00000468864 DDX10Q13206 875 aaKnown RBP14.89□□□□□ -0.03
TRAPPC10-207ENST00000468864 TRIM52Q96A61 297 aa14.89□□□□□ -0.03
TRAPPC10-207ENST00000468864 HIRIP3Q9BW71 556 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC10-207ENST00000468864 UNC13AQ9UPW8 1703 aa14.8□□□□□ -0.04
TRAPPC10-207ENST00000468864 IRX6P78412 446 aaPredicted RBP14.79□□□□□ -0.04
TRAPPC10-207ENST00000468864 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
TRAPPC10-207ENST00000468864 HNRNPUQ00839 825 aaKnown RBP eCLIP14.76□□□□□ -0.05
TRAPPC10-207ENST00000468864 CLSPNQ9HAW4 1339 aa14.76□□□□□ -0.05
TRAPPC10-207ENST00000468864 ZNF326Q5BKZ1 582 aaKnown RBP14.75□□□□□ -0.05
TRAPPC10-207ENST00000468864 NBR1Q14596 966 aa14.74□□□□□ -0.05
TRAPPC10-207ENST00000468864 NPM2Q86SE8 214 aaKnown RBP14.74□□□□□ -0.05
TRAPPC10-207ENST00000468864 P3H3Q8IVL6 736 aa14.74□□□□□ -0.05
TRAPPC10-207ENST00000468864 ANP32EQ9BTT0 268 aa14.74□□□□□ -0.05
TRAPPC10-207ENST00000468864 EIF4G1Q04637 1599 aaKnown RBP14.74□□□□□ -0.05
TRAPPC10-207ENST00000468864 BCL11AQ9H165 835 aa14.72□□□□□ -0.05
TRAPPC10-207ENST00000468864 RB1CC1Q8TDY2 1594 aa14.69□□□□□ -0.06
TRAPPC10-207ENST00000468864 EIF5BO60841 1220 aaKnown RBP14.67□□□□□ -0.06
TRAPPC10-207ENST00000468864 SUPT16HQ9Y5B9 1047 aaKnown RBP14.67□□□□□ -0.06
TRAPPC10-207ENST00000468864 FAM9BQ8IZU0 186 aa14.66□□□□□ -0.06
TRAPPC10-207ENST00000468864 ANP32AP39687 249 aaKnown RBP14.66□□□□□ -0.06
TRAPPC10-207ENST00000468864 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.08
TRAPPC10-207ENST00000468864 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
TRAPPC10-207ENST00000468864 SALL2Q9Y467 1007 aaPredicted RBP14.58□□□□□ -0.08
TRAPPC10-207ENST00000468864 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
TRAPPC10-207ENST00000468864 PRKCSHP14314 528 aaPredicted RBP14.53□□□□□ -0.08
TRAPPC10-207ENST00000468864 TONSLQ96HA7 1378 aa14.51□□□□□ -0.09
TRAPPC10-207ENST00000468864 CEP162Q5TB80 1403 aa14.51□□□□□ -0.09
TRAPPC10-207ENST00000468864 CCDC136Q96JN2 1154 aa14.5□□□□□ -0.09
TRAPPC10-207ENST00000468864 MYT1LQ9UL68 1186 aa14.5□□□□□ -0.09
TRAPPC10-207ENST00000468864 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC10-207ENST00000468864 RSF1Q96T23 1441 aaPredicted RBP14.49□□□□□ -0.09
TRAPPC10-207ENST00000468864 SCRIBQ14160 1630 aa14.47□□□□□ -0.09
TRAPPC10-207ENST00000468864 MRS2Q9HD23 443 aa14.46□□□□□ -0.09
TRAPPC10-207ENST00000468864 TSHZ2Q9NRE2 1034 aa14.46□□□□□ -0.09
TRAPPC10-207ENST00000468864 BICRAQ9NZM4 1560 aa14.45□□□□□ -0.1
TRAPPC10-207ENST00000468864 RBM19Q9Y4C8 960 aaKnown RBP14.44□□□□□ -0.1
TRAPPC10-207ENST00000468864 CLIP1P30622 1438 aa14.44□□□□□ -0.1
TRAPPC10-207ENST00000468864 RTN4Q9NQC3 1192 aaKnown RBP14.43□□□□□ -0.1
TRAPPC10-207ENST00000468864 BAZ1AQ9NRL2 1556 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC10-207ENST00000468864 CHIC2Q9UKJ5 165 aa14.42□□□□□ -0.1
TRAPPC10-207ENST00000468864 SIN3AQ96ST3 1273 aa14.42□□□□□ -0.1
TRAPPC10-207ENST00000468864 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
TRAPPC10-207ENST00000468864 ARXQ96QS3 562 aa14.4□□□□□ -0.1
TRAPPC10-207ENST00000468864 B4GALNT3Q6L9W6 998 aa14.35□□□□□ -0.11
TRAPPC10-207ENST00000468864 TMC1Q8TDI8 760 aa14.34□□□□□ -0.11
TRAPPC10-207ENST00000468864 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
TRAPPC10-207ENST00000468864 CANXP27824 592 aaKnown RBP14.32□□□□□ -0.12
TRAPPC10-207ENST00000468864 ZNF777Q9ULD5 760 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms