RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 RAD54L2Q9Y4B4 1467 aa9.75□□□□□ -0.85
CHMP3-206ENST00000466032 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.75□□□□□ -0.85
CHMP3-206ENST00000466032 ERICH3Q5RHP9 1530 aa9.75□□□□□ -0.85
CHMP3-206ENST00000466032 PLCG2P16885 1265 aa9.74□□□□□ -0.85
CHMP3-206ENST00000466032 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
CHMP3-206ENST00000466032 IRX5P78411 483 aaPredicted RBP9.73□□□□□ -0.85
CHMP3-206ENST00000466032 IGF1RP08069 1367 aa9.72□□□□□ -0.85
CHMP3-206ENST00000466032 ABCA5Q8WWZ7 1642 aa9.71□□□□□ -0.85
CHMP3-206ENST00000466032 GRIN2BQ13224 1484 aa9.71□□□□□ -0.86
CHMP3-206ENST00000466032 KIF21BO75037 1637 aa9.71□□□□□ -0.86
CHMP3-206ENST00000466032 CUL7Q14999 1698 aa9.71□□□□□ -0.86
CHMP3-206ENST00000466032 FAM9AQ8IZU1 332 aaPredicted RBP9.7□□□□□ -0.86
CHMP3-206ENST00000466032 TDRD9Q8NDG6 1382 aaKnown RBP9.7□□□□□ -0.86
CHMP3-206ENST00000466032 PRXQ9BXM0 1461 aa9.7□□□□□ -0.86
CHMP3-206ENST00000466032 GOLGA3Q08378 1498 aa9.69□□□□□ -0.86
CHMP3-206ENST00000466032 CARMIL1Q5VZK9 1371 aa9.69□□□□□ -0.86
CHMP3-206ENST00000466032 RUSC2Q8N2Y8 1516 aa9.69□□□□□ -0.86
CHMP3-206ENST00000466032 MAGI1Q96QZ7 1491 aaPredicted RBP9.67□□□□□ -0.86
CHMP3-206ENST00000466032 RAPGEF2Q9Y4G8 1499 aa9.67□□□□□ -0.86
CHMP3-206ENST00000466032 FHAD1B1AJZ9 1412 aa9.66□□□□□ -0.86
CHMP3-206ENST00000466032 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.864e-6■■□□□ 13.9
CHMP3-206ENST00000466032 EIF4G3O43432 1585 aaKnown RBP9.65□□□□□ -0.86
CHMP3-206ENST00000466032 TNIKQ9UKE5 1360 aa9.64□□□□□ -0.87
CHMP3-206ENST00000466032 PTGER2P43116 358 aa9.64□□□□□ -0.87
CHMP3-206ENST00000466032 ZNF608Q9ULD9 1512 aaPredicted RBP9.64□□□□□ -0.87
CHMP3-206ENST00000466032 ZBTB22O15209 634 aa9.63□□□□□ -0.87
CHMP3-206ENST00000466032 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
CHMP3-206ENST00000466032 UBTFP17480 764 aaKnown RBP9.62□□□□□ -0.87
CHMP3-206ENST00000466032 SYNJ2O15056 1496 aa9.61□□□□□ -0.87
CHMP3-206ENST00000466032 PLA2G2EQ9NZK7 142 aa9.61□□□□□ -0.87
CHMP3-206ENST00000466032 SGIP1Q9BQI5 828 aa9.6□□□□□ -0.87
CHMP3-206ENST00000466032 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
CHMP3-206ENST00000466032 ADAMTS12P58397 1594 aa9.59□□□□□ -0.87
CHMP3-206ENST00000466032 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.87
CHMP3-206ENST00000466032 SNAPC4Q5SXM2 1469 aa9.59□□□□□ -0.87
CHMP3-206ENST00000466032 LOC105371045A0A1W2PR82 267 aa9.58□□□□□ -0.88
CHMP3-206ENST00000466032 GRIN2AQ12879 1464 aa9.55□□□□□ -0.88
CHMP3-206ENST00000466032 SLC4A1APQ9BWU0 796 aaKnown RBP9.54□□□□□ -0.88
CHMP3-206ENST00000466032 KIAA0586Q9BVV6 1533 aa9.53□□□□□ -0.88
CHMP3-206ENST00000466032 NUP160Q12769 1436 aa9.51□□□□□ -0.89
CHMP3-206ENST00000466032 CEP162Q5TB80 1403 aa9.51□□□□□ -0.89
CHMP3-206ENST00000466032 CTTNBP2Q8WZ74 1663 aa9.51□□□□□ -0.89
CHMP3-206ENST00000466032 CLIP1P30622 1438 aa9.5□□□□□ -0.89
CHMP3-206ENST00000466032 HOXB1P14653 301 aaPredicted RBP9.5□□□□□ -0.89
CHMP3-206ENST00000466032 EFCAB5A4FU69 1503 aa9.5□□□□□ -0.89
CHMP3-206ENST00000466032 IQGAP2Q13576 1575 aa9.48□□□□□ -0.89
CHMP3-206ENST00000466032 EHMT2Q96KQ7 1210 aa9.47□□□□□ -0.89
CHMP3-206ENST00000466032 UGGT2Q9NYU1 1516 aa9.46□□□□□ -0.89
CHMP3-206ENST00000466032 TMEM106CQ9BVX2 250 aa9.46□□□□□ -0.9
CHMP3-206ENST00000466032 ERBB3P21860 1342 aa9.46□□□□□ -0.9
CHMP3-206ENST00000466032 CARMIL2Q6F5E8 1435 aa9.46□□□□□ -0.9
CHMP3-206ENST00000466032 HOXB3P14651 431 aaPredicted RBP9.44□□□□□ -0.9
CHMP3-206ENST00000466032 JPH4Q96JJ6 628 aa9.44□□□□□ -0.9
CHMP3-206ENST00000466032 DNAJC5Q9H3Z4 198 aa9.44□□□□□ -0.9
CHMP3-206ENST00000466032 FMN1Q68DA7 1419 aa9.44□□□□□ -0.9
CHMP3-206ENST00000466032 CHD1O14646 1710 aa9.43□□□□□ -0.9
CHMP3-206ENST00000466032 CEP170Q5SW79 1584 aa9.43□□□□□ -0.9
CHMP3-206ENST00000466032 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
CHMP3-206ENST00000466032 PCDHB13Q9Y5F0 798 aa9.43□□□□□ -0.9
CHMP3-206ENST00000466032 ZNF687Q8N1G0 1237 aa9.42□□□□□ -0.9
CHMP3-206ENST00000466032 SAMD9Q5K651 1589 aa9.41□□□□□ -0.9
CHMP3-206ENST00000466032 ARHGAP35Q9NRY4 1499 aa9.41□□□□□ -0.9
CHMP3-206ENST00000466032 VPS8Q8N3P4 1428 aa9.41□□□□□ -0.9
CHMP3-206ENST00000466032 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
CHMP3-206ENST00000466032 RGS20O76081 388 aa9.4□□□□□ -0.9
CHMP3-206ENST00000466032 CLASP1Q7Z460 1538 aa9.39□□□□□ -0.91
CHMP3-206ENST00000466032 SHROOM2Q13796 1616 aa9.38□□□□□ -0.91
CHMP3-206ENST00000466032 IFNL1Q8IU54 200 aa9.37□□□□□ -0.91
CHMP3-206ENST00000466032 KIAA0556O60303 1618 aa9.37□□□□□ -0.91
CHMP3-206ENST00000466032 ARAP1Q96P48 1450 aa9.36□□□□□ -0.91
CHMP3-206ENST00000466032 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-206ENST00000466032 VARS2Q5ST30 1063 aaKnown RBP9.36□□□□□ -0.91
CHMP3-206ENST00000466032 RASEFQ8IZ41 740 aa9.36□□□□□ -0.91
CHMP3-206ENST00000466032 PRG4Q92954 1404 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-206ENST00000466032 MAP3K1Q13233 1512 aa9.36□□□□□ -0.91
CHMP3-206ENST00000466032 DISP1Q96F81 1524 aa9.36□□□□□ -0.91
CHMP3-206ENST00000466032 CASKIN1Q8WXD9 1431 aa9.35□□□□□ -0.91
CHMP3-206ENST00000466032 FYCO1Q9BQS8 1478 aa9.34□□□□□ -0.91
CHMP3-206ENST00000466032 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
CHMP3-206ENST00000466032 FHOD3Q2V2M9 1422 aa9.33□□□□□ -0.92
CHMP3-206ENST00000466032 PDCD7Q8N8D1 485 aaKnown RBP9.33□□□□□ -0.92
CHMP3-206ENST00000466032 PTPRGP23470 1445 aa9.32□□□□□ -0.92
CHMP3-206ENST00000466032 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
CHMP3-206ENST00000466032 CCDC18Q5T9S5 1454 aa9.32□□□□□ -0.92
CHMP3-206ENST00000466032 P3H3Q8IVL6 736 aa9.31□□□□□ -0.92
CHMP3-206ENST00000466032 CDK11AQ9UQ88 783 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-206ENST00000466032 HECW1Q76N89 1606 aa9.3□□□□□ -0.92
CHMP3-206ENST00000466032 UACAQ9BZF9 1416 aa9.27□□□□□ -0.93
CHMP3-206ENST00000466032 UHRF1BP1LA0JNW5 1464 aa9.27□□□□□ -0.93
CHMP3-206ENST00000466032 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.93
CHMP3-206ENST00000466032 ZNF710Q8N1W2 664 aa9.26□□□□□ -0.93
CHMP3-206ENST00000466032 ABCA8O94911 1581 aa9.25□□□□□ -0.93
CHMP3-206ENST00000466032 PCF11O94913 1555 aaKnown RBP9.25□□□□□ -0.93
CHMP3-206ENST00000466032 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
CHMP3-206ENST00000466032 ATP1B4Q9UN42 357 aaPredicted RBP9.25□□□□□ -0.93
CHMP3-206ENST00000466032 TIAM1Q13009 1591 aa9.24□□□□□ -0.93
CHMP3-206ENST00000466032 EPRSP07814 1512 aaKnown RBP9.24□□□□□ -0.93
CHMP3-206ENST00000466032 ABCC2Q92887 1545 aa9.23□□□□□ -0.93
CHMP3-206ENST00000466032 MTUS2Q5JR59 1369 aa9.23□□□□□ -0.93
CHMP3-206ENST00000466032 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms